RNA–Protein interactions for RNA: ENST00000459894.6

SFXN2-202, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 2,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-202ENST00000459894 USP44Q9H0E7 712 aa17.33■□□□□ 0.37
SFXN2-202ENST00000459894 PLEKHG1Q9ULL1 1385 aa17.33■□□□□ 0.36
SFXN2-202ENST00000459894 CACNA1FO60840 1977 aa17.33■□□□□ 0.36
SFXN2-202ENST00000459894 NUTM2FA1L443 756 aa17.33■□□□□ 0.36
SFXN2-202ENST00000459894 UQCRHLA0A096LP55 91 aa17.32■□□□□ 0.36
SFXN2-202ENST00000459894 UQCRHP07919 91 aa17.32■□□□□ 0.36
SFXN2-202ENST00000459894 RAD50Q92878 1312 aa17.32■□□□□ 0.36
SFXN2-202ENST00000459894 KLHL34Q8N239 644 aa17.32■□□□□ 0.36
SFXN2-202ENST00000459894 GADD45BO75293 160 aaPredicted RBP17.31■□□□□ 0.36
SFXN2-202ENST00000459894 LETM1O95202 739 aaPredicted RBP17.31■□□□□ 0.36
SFXN2-202ENST00000459894 PTMAP06454 111 aaKnown RBP17.31■□□□□ 0.36
SFXN2-202ENST00000459894 SASS6Q6UVJ0 657 aa17.31■□□□□ 0.36
SFXN2-202ENST00000459894 RPAP1Q9BWH6 1393 aaPredicted RBP17.31■□□□□ 0.36
SFXN2-202ENST00000459894 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
SFXN2-202ENST00000459894 POLA2Q14181 598 aa17.31■□□□□ 0.36
SFXN2-202ENST00000459894 IL25Q9H293 177 aa17.31■□□□□ 0.36
SFXN2-202ENST00000459894 SGSM2O43147 1006 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 CCDC183Q5T5S1 534 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 PI4K2BQ8TCG2 481 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 IL1RAPL2Q9NP60 686 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 TAF7Q15545 349 aaPredicted RBP17.3■□□□□ 0.36
SFXN2-202ENST00000459894 MTERF4Q7Z6M4 381 aaKnown RBP17.3■□□□□ 0.36
SFXN2-202ENST00000459894 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 TTC14Q96N46 770 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 ZMYND15Q9H091 742 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 GDPD2Q9HCC8 539 aa17.3■□□□□ 0.36
SFXN2-202ENST00000459894 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
SFXN2-202ENST00000459894 ZSCAN22P10073 491 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-202ENST00000459894 RBM10P98175 930 aaKnown RBP17.29■□□□□ 0.36
SFXN2-202ENST00000459894 CNTROBQ8N137 903 aa17.29■□□□□ 0.36
SFXN2-202ENST00000459894 RHPN1Q8TCX5 695 aa17.29■□□□□ 0.36
SFXN2-202ENST00000459894 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.29■□□□□ 0.36
SFXN2-202ENST00000459894 SNX14Q9Y5W7 946 aa17.29■□□□□ 0.36
SFXN2-202ENST00000459894 SURF6O75683 361 aaKnown RBP17.28■□□□□ 0.36
SFXN2-202ENST00000459894 PPP1R42Q7Z4L9 355 aa17.28■□□□□ 0.36
SFXN2-202ENST00000459894 IL17REQ8NFR9 667 aa17.28■□□□□ 0.36
SFXN2-202ENST00000459894 KIF1BPQ96EK5 621 aa17.28■□□□□ 0.36
SFXN2-202ENST00000459894 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
SFXN2-202ENST00000459894 UBE2HP62256 183 aa17.27■□□□□ 0.36
SFXN2-202ENST00000459894 LSG1Q9H089 658 aaKnown RBP17.27■□□□□ 0.36
SFXN2-202ENST00000459894 FAM13BQ9NYF5 915 aa17.27■□□□□ 0.36
SFXN2-202ENST00000459894 ATP6V1DQ9Y5K8 247 aa17.27■□□□□ 0.36
SFXN2-202ENST00000459894 FOXD4L6Q3SYB3 417 aaPredicted RBP17.27■□□□□ 0.35
SFXN2-202ENST00000459894 FOXD4L3Q6VB84 417 aaPredicted RBP17.27■□□□□ 0.35
SFXN2-202ENST00000459894 LIMCH1Q9UPQ0 1083 aa17.27■□□□□ 0.35
SFXN2-202ENST00000459894 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
SFXN2-202ENST00000459894 NGDNQ8NEJ9 315 aaKnown RBP17.26■□□□□ 0.35
SFXN2-202ENST00000459894 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
SFXN2-202ENST00000459894 STX6O43752 255 aa17.26■□□□□ 0.35
SFXN2-202ENST00000459894 AK2P54819 239 aa17.26■□□□□ 0.35
SFXN2-202ENST00000459894 NWD1Q149M9 1564 aa17.26■□□□□ 0.35
SFXN2-202ENST00000459894 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
SFXN2-202ENST00000459894 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
SFXN2-202ENST00000459894 CNPY2Q9Y2B0 182 aa17.25■□□□□ 0.35
SFXN2-202ENST00000459894 LTKP29376 864 aa17.25■□□□□ 0.35
SFXN2-202ENST00000459894 HOXC9P31274 260 aa17.25■□□□□ 0.35
SFXN2-202ENST00000459894 SRGAP3O43295 1099 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 MAP4K4O95819 1239 aaPredicted RBP17.24■□□□□ 0.35
SFXN2-202ENST00000459894 F13A1P00488 732 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 SYT1P21579 422 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 PHAXQ9H814 394 aaKnown RBP17.24■□□□□ 0.35
SFXN2-202ENST00000459894 SMC3Q9UQE7 1217 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 PIBF1Q8WXW3 757 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 PKNOX2Q96KN3 472 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 CHMP4AQ9BY43 222 aa17.24■□□□□ 0.35
SFXN2-202ENST00000459894 TTC41PQ6P2S7 1318 aa17.23■□□□□ 0.35
SFXN2-202ENST00000459894 RASEFQ8IZ41 740 aa17.22■□□□□ 0.35
SFXN2-202ENST00000459894 USP25Q9UHP3 1055 aa17.22■□□□□ 0.35
SFXN2-202ENST00000459894 DIP2AQ14689 1571 aa17.22■□□□□ 0.35
SFXN2-202ENST00000459894 HOXB7P09629 217 aa17.22■□□□□ 0.35
SFXN2-202ENST00000459894 NLRP6P59044 892 aa17.22■□□□□ 0.35
SFXN2-202ENST00000459894 RUFY2Q8WXA3 655 aa17.22■□□□□ 0.35
SFXN2-202ENST00000459894 GLRX3O76003 335 aaKnown RBP17.21■□□□□ 0.35
SFXN2-202ENST00000459894 ADCY5O95622 1261 aa17.21■□□□□ 0.35
SFXN2-202ENST00000459894 AMOTL2Q9Y2J4 779 aa17.21■□□□□ 0.35
SFXN2-202ENST00000459894 CWC27Q6UX04 472 aaKnown RBP17.21■□□□□ 0.35
SFXN2-202ENST00000459894 PRIMPOLQ96LW4 560 aa17.21■□□□□ 0.35
SFXN2-202ENST00000459894 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
SFXN2-202ENST00000459894 BEND3Q5T5X7 828 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 MYRIPQ8NFW9 859 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 HYPKQ9NX55 129 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 USP54Q70EL1 1684 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 KDM4AO75164 1064 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
SFXN2-202ENST00000459894 HCLS1P14317 486 aaPredicted RBP17.2■□□□□ 0.34
SFXN2-202ENST00000459894 CASTP20810 708 aaKnown RBP17.2■□□□□ 0.34
SFXN2-202ENST00000459894 SLC26A8Q96RN1 970 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 TM6SF1Q9BZW5 370 aa17.2■□□□□ 0.34
SFXN2-202ENST00000459894 SH2B1Q9NRF2 756 aaPredicted RBP17.2■□□□□ 0.34
SFXN2-202ENST00000459894 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
SFXN2-202ENST00000459894 DNAAF4Q8WXU2 420 aa17.19■□□□□ 0.34
SFXN2-202ENST00000459894 KCNB2Q92953 911 aa17.19■□□□□ 0.34
SFXN2-202ENST00000459894 FUCA2Q9BTY2 467 aa17.19■□□□□ 0.34
SFXN2-202ENST00000459894 DIAPH3Q9NSV4 1193 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms