RNA–Protein interactions for RNA: ENST00000458271.6

CSRP1-203, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 1,324 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-203ENST00000458271 GYS1P13807 737 aa16.46■□□□□ 0.23
CSRP1-203ENST00000458271 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
CSRP1-203ENST00000458271 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.23
CSRP1-203ENST00000458271 COL15A1P39059 1388 aa16.46■□□□□ 0.23
CSRP1-203ENST00000458271 STARD3NLO95772 234 aa16.45■□□□□ 0.22
CSRP1-203ENST00000458271 WDR43Q15061 677 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSRP1-203ENST00000458271 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
CSRP1-203ENST00000458271 NLGN1Q8N2Q7 840 aa16.45■□□□□ 0.22
CSRP1-203ENST00000458271 THUMPD2Q9BTF0 503 aaKnown RBP16.45■□□□□ 0.22
CSRP1-203ENST00000458271 CD2APQ9Y5K6 639 aa16.45■□□□□ 0.22
CSRP1-203ENST00000458271 CANXP27824 592 aaKnown RBP16.44■□□□□ 0.22
CSRP1-203ENST00000458271 TAF7Q15545 349 aaPredicted RBP16.44■□□□□ 0.22
CSRP1-203ENST00000458271 TEX13AQ9BXU3 409 aaPredicted RBP16.44■□□□□ 0.22
CSRP1-203ENST00000458271 KIF13BQ9NQT8 1826 aa16.43■□□□□ 0.22
CSRP1-203ENST00000458271 LAMB4A4D0S4 1761 aa16.43■□□□□ 0.22
CSRP1-203ENST00000458271 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
CSRP1-203ENST00000458271 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 PRAMEF22A3QJZ6 481 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 ZPR1O75312 459 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 RIPK4P57078 832 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 FKBP8Q14318 412 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 USPL1Q5W0Q7 1092 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
CSRP1-203ENST00000458271 KIAA1551Q9HCM1 1747 aa16.41■□□□□ 0.22
CSRP1-203ENST00000458271 TMPOP42166 694 aaKnown RBP16.41■□□□□ 0.22
CSRP1-203ENST00000458271 GPR162Q16538 588 aa16.41■□□□□ 0.22
CSRP1-203ENST00000458271 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
CSRP1-203ENST00000458271 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
CSRP1-203ENST00000458271 C10orf71Q711Q0 1435 aa16.4■□□□□ 0.22
CSRP1-203ENST00000458271 A1BGP04217 495 aa16.4■□□□□ 0.22
CSRP1-203ENST00000458271 SNRPA1P09661 255 aaKnown RBP16.4■□□□□ 0.22
CSRP1-203ENST00000458271 EIF5P55010 431 aaKnown RBP16.4■□□□□ 0.22
CSRP1-203ENST00000458271 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
CSRP1-203ENST00000458271 NARFQ9UHQ1 456 aa16.4■□□□□ 0.22
CSRP1-203ENST00000458271 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
CSRP1-203ENST00000458271 PARP3Q9Y6F1 533 aa16.4■□□□□ 0.22
CSRP1-203ENST00000458271 LMOD3Q0VAK6 560 aa16.39■□□□□ 0.21
CSRP1-203ENST00000458271 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
CSRP1-203ENST00000458271 PNISRQ8TF01 805 aaKnown RBP16.39■□□□□ 0.21
CSRP1-203ENST00000458271 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
CSRP1-203ENST00000458271 BCORQ6W2J9 1755 aa16.38■□□□□ 0.21
CSRP1-203ENST00000458271 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
CSRP1-203ENST00000458271 PXDNLA1KZ92 1463 aa16.38■□□□□ 0.21
CSRP1-203ENST00000458271 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
CSRP1-203ENST00000458271 DDR1Q08345 913 aa16.38■□□□□ 0.21
CSRP1-203ENST00000458271 CHD4Q14839 1912 aa16.37■□□□□ 0.21
CSRP1-203ENST00000458271 YBX3P16989 372 aaKnown RBP eCLIP16.37■□□□□ 0.21
CSRP1-203ENST00000458271 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
CSRP1-203ENST00000458271 AFDNP55196 1824 aaKnown RBP16.36■□□□□ 0.21
CSRP1-203ENST00000458271 A0A087WZG4 1122 aa16.36■□□□□ 0.21
CSRP1-203ENST00000458271 POLRMTO00411 1230 aaKnown RBP16.36■□□□□ 0.21
CSRP1-203ENST00000458271 YY1P25490 414 aa16.36■□□□□ 0.21
CSRP1-203ENST00000458271 CCDC184Q52MB2 194 aa16.36■□□□□ 0.21
CSRP1-203ENST00000458271 BCL2L12Q9HB09 334 aa16.36■□□□□ 0.21
CSRP1-203ENST00000458271 WWC3Q9ULE0 1092 aa16.36■□□□□ 0.21
CSRP1-203ENST00000458271 NRXN2Q9P2S2 1712 aa16.35■□□□□ 0.21
CSRP1-203ENST00000458271 TM4SF1P30408 202 aa16.35■□□□□ 0.21
CSRP1-203ENST00000458271 EIF4A1P60842 406 aaKnown RBP16.35■□□□□ 0.21
CSRP1-203ENST00000458271 NFIXQ14938 502 aa16.35■□□□□ 0.21
CSRP1-203ENST00000458271 NPM2Q86SE8 214 aaKnown RBP16.35■□□□□ 0.21
CSRP1-203ENST00000458271 TSPYL4Q9UJ04 414 aa16.35■□□□□ 0.21
CSRP1-203ENST00000458271 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
CSRP1-203ENST00000458271 ANP32CO43423 234 aa16.34■□□□□ 0.21
CSRP1-203ENST00000458271 GIGYF1O75420 1035 aaPredicted RBP16.34■□□□□ 0.21
CSRP1-203ENST00000458271 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
CSRP1-203ENST00000458271 BRCA1P38398 1863 aaKnown RBP16.33■□□□□ 0.21
CSRP1-203ENST00000458271 NBPF26B4DH59 902 aa16.32■□□□□ 0.2
CSRP1-203ENST00000458271 TGFB2P61812 414 aa16.32■□□□□ 0.2
CSRP1-203ENST00000458271 NBPF10Q6P3W6 841 aaKnown RBP16.32■□□□□ 0.2
CSRP1-203ENST00000458271 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
CSRP1-203ENST00000458271 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
CSRP1-203ENST00000458271 NBPF15Q8N660 670 aa16.32■□□□□ 0.2
CSRP1-203ENST00000458271 A0A0G2JLW4 131 aa16.31■□□□□ 0.2
CSRP1-203ENST00000458271 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
CSRP1-203ENST00000458271 TBC1D9BQ66K14 1250 aa16.31■□□□□ 0.2
CSRP1-203ENST00000458271 APAF1O14727 1248 aa16.3■□□□□ 0.2
CSRP1-203ENST00000458271 GRIN3BO60391 1043 aa16.3■□□□□ 0.2
CSRP1-203ENST00000458271 BABAM1Q9NWV8 329 aa16.3■□□□□ 0.2
CSRP1-203ENST00000458271 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
CSRP1-203ENST00000458271 DPEP1P16444 411 aa16.29■□□□□ 0.2
CSRP1-203ENST00000458271 MRS2Q9HD23 443 aa16.29■□□□□ 0.2
CSRP1-203ENST00000458271 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
CSRP1-203ENST00000458271 SERPINB2P05120 415 aa16.28■□□□□ 0.2
CSRP1-203ENST00000458271 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
CSRP1-203ENST00000458271 CHL1O00533 1208 aa16.27■□□□□ 0.2
CSRP1-203ENST00000458271 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.19
CSRP1-203ENST00000458271 KCNA3P22001 575 aa16.26■□□□□ 0.19
CSRP1-203ENST00000458271 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
CSRP1-203ENST00000458271 ZNF652Q9Y2D9 606 aa16.26■□□□□ 0.19
CSRP1-203ENST00000458271 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
CSRP1-203ENST00000458271 MYL6BP14649 208 aa16.25■□□□□ 0.19
CSRP1-203ENST00000458271 CHRNA5P30532 468 aa16.25■□□□□ 0.19
CSRP1-203ENST00000458271 KRT24Q2M2I5 525 aa16.25■□□□□ 0.19
CSRP1-203ENST00000458271 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
CSRP1-203ENST00000458271 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
CSRP1-203ENST00000458271 COL11A2P13942 1736 aaPredicted RBP16.24■□□□□ 0.19
CSRP1-203ENST00000458271 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
CSRP1-203ENST00000458271 CLEC4GQ6UXB4 293 aa16.24■□□□□ 0.19
CSRP1-203ENST00000458271 CFAP44Q96MT7 982 aa16.24■□□□□ 0.19
CSRP1-203ENST00000458271 NUP98P52948 1817 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms