RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 C1orf216Q8TAB5 229 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 OXCT2Q9BYC2 517 aaPredicted RBP5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 RUBCNLQ9H714 662 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 NDFIP2Q9NV92 336 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 USP35Q9P2H5 1018 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 COG6Q9Y2V7 657 aa5.92□□□□□ -1.46
HMGB3P30-201ENST00000457863 MTFR1Q15390 333 aa5.91□□□□□ -1.46
HMGB3P30-201ENST00000457863 TBC1D9Q6ZT07 1266 aa5.91□□□□□ -1.46
HMGB3P30-201ENST00000457863 FAM177A1Q8N128 213 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P30-201ENST00000457863 NFATC2IPQ8NCF5 419 aa5.91□□□□□ -1.46
HMGB3P30-201ENST00000457863 NEDD1Q8NHV4 660 aa5.91□□□□□ -1.46
HMGB3P30-201ENST00000457863 GDF2Q9UK05 429 aaPredicted RBP5.91□□□□□ -1.46
HMGB3P30-201ENST00000457863 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 TMEM229AB2RXF0 380 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 PLA2G4AP47712 749 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 SMTNP53814 917 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 FIGNL1Q6PIW4 674 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 BEND7Q8N7W2 519 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 GOLGA6L1Q8N7Z2 621 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 SLC4A9Q96Q91 983 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 NIFKQ9BYG3 293 aaKnown RBP5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 DNAAF2Q9NVR5 837 aaKnown RBP5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 IQSEC3Q9UPP2 1182 aaPredicted RBP5.9□□□□□ -1.46
HMGB3P30-201ENST00000457863 LZTS3O60299 673 aaPredicted RBP5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 SLCO4C1Q6ZQN7 724 aa5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 NLRP8Q86W28 1048 aa5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 KLRG1Q96E93 195 aa5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 POLR3GLQ9BT43 218 aa5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 ALG2Q9H553 416 aa5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 ZDHHC3Q9NYG2 299 aa5.89□□□□□ -1.47
HMGB3P30-201ENST00000457863 SHISA8B8ZZ34 492 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 BNIP3LO60238 219 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 FGFR3P22607 806 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 EML3Q32P44 896 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 GPAT2Q6NUI2 795 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 ABHD17AQ96GS6 310 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 DCAF5Q96JK2 942 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 PCDHGA11Q9Y5H2 935 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 CNTNAP5Q8WYK1 1306 aa5.88□□□□□ -1.47
HMGB3P30-201ENST00000457863 A6NJY4 79 aa5.87□□□□□ -1.47
HMGB3P30-201ENST00000457863 SUZ12Q15022 739 aaKnown RBP5.87□□□□□ -1.47
HMGB3P30-201ENST00000457863 NBPF1Q3BBV0 1214 aa5.87□□□□□ -1.47
HMGB3P30-201ENST00000457863 PCDHGC4Q9Y5F7 938 aa5.87□□□□□ -1.47
HMGB3P30-201ENST00000457863 CDK2AP1O14519 115 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 C2CD2LO14523 706 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 ARAFP10398 606 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 BMP4P12644 408 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 GTF2IP78347 998 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 PLA2G4EQ3MJ16 856 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 FAM182BQ5T319 152 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 C1orf229Q6ZS94 237 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 ALYREFQ86V81 257 aaKnown RBP5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 WWC1Q8IX03 1113 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 NOD1Q9Y239 953 aa5.86□□□□□ -1.47
HMGB3P30-201ENST00000457863 FAM157BP0CG42 384 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 SNRPNP63162 240 aaKnown RBP5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 FAM9AQ8IZU1 332 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 GALNT6Q8NCL4 622 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 CLUAP1Q96AJ1 413 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 ZCCHC2Q9C0B9 1178 aaKnown RBP5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 SERTAD1Q9UHV2 236 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 SERPINA10Q9UK55 444 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 MKL2Q9ULH7 1088 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 AMOTL2Q9Y2J4 779 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 USP3Q9Y6I4 520 aa5.85□□□□□ -1.47
HMGB3P30-201ENST00000457863 USP17L5A8MUK1 530 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 BACH1O14867 736 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 ITGB2P05107 769 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 SKIP12755 728 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 HOXB4P17483 251 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 TATP17735 454 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 EPHA4P54764 986 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 CTBSQ01459 385 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 NCOA4Q13772 614 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 TAF7LQ5H9L4 462 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 SAMD5Q5TGI4 173 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 EDARADDQ8WWZ3 215 aa5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 AVENQ9NQS1 362 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P30-201ENST00000457863 A0A1W2PNR3 127 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 ATXN7O15265 892 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 EPXP11678 715 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 PLEKHM2Q8IWE5 1019 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 RETREG2Q8NC44 543 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 POM121Q96HA1 1249 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 SPOCK3Q9BQ16 436 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 ZNF358Q9NW07 568 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 SCHIP1Q9P0W5 487 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 GGA1Q9UJY5 639 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 HCN2Q9UL51 889 aa5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 GPC6Q9Y625 555 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P30-201ENST00000457863 DCDC2BA2VCK2 349 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 MSTNO14793 375 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 PROCP04070 461 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 MAPTP10636 758 aaKnown RBP5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 DGKGP49619 791 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 TNP2Q05952 138 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 ADAMTS19Q8TE59 1207 aa5.82□□□□□ -1.48
HMGB3P30-201ENST00000457863 AIDAQ96BJ3 306 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms