RNA–Protein interactions for RNA: ENST00000457212.5

FAM3A-217, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-217ENST00000457212 ZBED9Q6R2W3 1325 aa26.65■■□□□ 1.86
FAM3A-217ENST00000457212 CCDC87Q9NVE4 849 aa26.64■■□□□ 1.86
FAM3A-217ENST00000457212 USP16Q9Y5T5 823 aa26.64■■□□□ 1.86
FAM3A-217ENST00000457212 SOS1Q07889 1333 aaPredicted RBP26.64■■□□□ 1.85
FAM3A-217ENST00000457212 PRAMEF22A3QJZ6 481 aa26.63■■□□□ 1.85
FAM3A-217ENST00000457212 SLFN5Q08AF3 891 aa26.63■■□□□ 1.85
FAM3A-217ENST00000457212 INTS5Q6P9B9 1019 aaKnown RBP26.62■■□□□ 1.85
FAM3A-217ENST00000457212 TFCP2L1Q9NZI6 479 aa26.62■■□□□ 1.85
FAM3A-217ENST00000457212 MYH14Q7Z406 1995 aaKnown RBP26.62■■□□□ 1.85
FAM3A-217ENST00000457212 QSER1Q2KHR3 1735 aa26.62■■□□□ 1.85
FAM3A-217ENST00000457212 DUSP27Q5VZP5 1158 aa26.61■■□□□ 1.85
FAM3A-217ENST00000457212 GNPATO15228 680 aa26.6■■□□□ 1.85
FAM3A-217ENST00000457212 RPS6KA4O75676 772 aa26.6■■□□□ 1.85
FAM3A-217ENST00000457212 KRT24Q2M2I5 525 aa26.6■■□□□ 1.85
FAM3A-217ENST00000457212 FLAD1Q8NFF5 587 aa26.6■■□□□ 1.85
FAM3A-217ENST00000457212 CHMP4AQ9BY43 222 aa26.6■■□□□ 1.85
FAM3A-217ENST00000457212 RTCBQ9Y3I0 505 aaKnown RBP26.6■■□□□ 1.85
FAM3A-217ENST00000457212 UBR3Q6ZT12 1888 aa26.59■■□□□ 1.85
FAM3A-217ENST00000457212 C8orf58Q8NAV2 365 aa26.59■■□□□ 1.85
FAM3A-217ENST00000457212 SSFA2P28290 1259 aa26.58■■□□□ 1.85
FAM3A-217ENST00000457212 TRMT2AQ8IZ69 625 aaKnown RBP26.58■■□□□ 1.85
FAM3A-217ENST00000457212 CDCA7LQ96GN5 454 aa26.58■■□□□ 1.85
FAM3A-217ENST00000457212 ERBB4Q15303 1308 aa26.58■■□□□ 1.85
FAM3A-217ENST00000457212 ADRA2BP18089 450 aa26.57■■□□□ 1.84
FAM3A-217ENST00000457212 R3HDM1Q15032 1099 aaKnown RBP26.57■■□□□ 1.84
FAM3A-217ENST00000457212 ZBTB1Q9Y2K1 713 aa26.57■■□□□ 1.84
FAM3A-217ENST00000457212 TUBGCP6Q96RT7 1819 aa26.57■■□□□ 1.84
FAM3A-217ENST00000457212 A1BGP04217 495 aa26.56■■□□□ 1.84
FAM3A-217ENST00000457212 EXOSC9Q06265 439 aaKnown RBP26.56■■□□□ 1.84
FAM3A-217ENST00000457212 EIF2S2P20042 333 aaKnown RBP26.55■■□□□ 1.84
FAM3A-217ENST00000457212 CANXP27824 592 aaKnown RBP26.55■■□□□ 1.84
FAM3A-217ENST00000457212 IL6STP40189 918 aaPredicted RBP26.55■■□□□ 1.84
FAM3A-217ENST00000457212 TWISTNBQ3B726 338 aaPredicted RBP26.55■■□□□ 1.84
FAM3A-217ENST00000457212 PNPLA7Q6ZV29 1317 aa26.55■■□□□ 1.84
FAM3A-217ENST00000457212 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.54■■□□□ 1.84
FAM3A-217ENST00000457212 ELL2O00472 640 aaPredicted RBP26.54■■□□□ 1.84
FAM3A-217ENST00000457212 HDGFL1Q5TGJ6 251 aa26.54■■□□□ 1.84
FAM3A-217ENST00000457212 TSPYL6Q8N831 410 aa26.54■■□□□ 1.84
FAM3A-217ENST00000457212 TRAPPC3LQ5T215 181 aa26.53■■□□□ 1.84
FAM3A-217ENST00000457212 PSDA5PKW4 1024 aaPredicted RBP26.52■■□□□ 1.84
FAM3A-217ENST00000457212 NBPF26B4DH59 902 aa26.52■■□□□ 1.84
FAM3A-217ENST00000457212 EIF5P55010 431 aaKnown RBP26.52■■□□□ 1.84
FAM3A-217ENST00000457212 NBPF10Q6P3W6 841 aaKnown RBP26.52■■□□□ 1.84
FAM3A-217ENST00000457212 AMIGO3Q86WK7 504 aa26.52■■□□□ 1.84
FAM3A-217ENST00000457212 NBPF15Q8N660 670 aa26.52■■□□□ 1.84
FAM3A-217ENST00000457212 A0A087WZG4 1122 aa26.51■■□□□ 1.83
FAM3A-217ENST00000457212 PHF14O94880 888 aa26.51■■□□□ 1.83
FAM3A-217ENST00000457212 NPM2Q86SE8 214 aaKnown RBP26.51■■□□□ 1.83
FAM3A-217ENST00000457212 COL23A1Q86Y22 540 aaPredicted RBP26.51■■□□□ 1.83
FAM3A-217ENST00000457212 COL15A1P39059 1388 aa26.5■■□□□ 1.83
FAM3A-217ENST00000457212 VAMP4O75379 141 aa26.5■■□□□ 1.83
FAM3A-217ENST00000457212 CCDC30Q5VVM6 783 aa26.5■■□□□ 1.83
FAM3A-217ENST00000457212 NECTIN2Q92692 538 aa26.49■■□□□ 1.83
FAM3A-217ENST00000457212 DDX21Q9NR30 783 aaKnown RBP eCLIP26.49■■□□□ 1.83
FAM3A-217ENST00000457212 DBF4Q9UBU7 674 aaPredicted RBP26.49■■□□□ 1.83
FAM3A-217ENST00000457212 CASZ1Q86V15 1759 aa26.48■■□□□ 1.83
FAM3A-217ENST00000457212 PDIA6Q15084 440 aa26.48■■□□□ 1.83
FAM3A-217ENST00000457212 SLC16A10Q8TF71 515 aa26.48■■□□□ 1.83
FAM3A-217ENST00000457212 ARHGEF1Q92888 912 aaKnown RBP26.48■■□□□ 1.83
FAM3A-217ENST00000457212 RFC4P35249 363 aa26.47■■□□□ 1.83
FAM3A-217ENST00000457212 PIP4K2AP48426 406 aaPredicted RBP26.47■■□□□ 1.83
FAM3A-217ENST00000457212 SMIM5Q71RC9 77 aa26.47■■□□□ 1.83
FAM3A-217ENST00000457212 MSH5O43196 834 aa26.46■■□□□ 1.83
FAM3A-217ENST00000457212 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
FAM3A-217ENST00000457212 CHPF2Q9P2E5 772 aa26.46■■□□□ 1.83
FAM3A-217ENST00000457212 ZNF330Q9Y3S2 320 aaPredicted RBP26.46■■□□□ 1.83
FAM3A-217ENST00000457212 C4AP0C0L4 1744 aa26.45■■□□□ 1.83
FAM3A-217ENST00000457212 MYL6BP14649 208 aa26.45■■□□□ 1.82
FAM3A-217ENST00000457212 ZNF428Q96B54 188 aa26.44■■□□□ 1.82
FAM3A-217ENST00000457212 YTHDC1Q96MU7 727 aaKnown RBP26.44■■□□□ 1.82
FAM3A-217ENST00000457212 STK31Q9BXU1 1019 aa26.44■■□□□ 1.82
FAM3A-217ENST00000457212 HYPKQ9NX55 129 aa26.44■■□□□ 1.82
FAM3A-217ENST00000457212 NARFQ9UHQ1 456 aa26.44■■□□□ 1.82
FAM3A-217ENST00000457212 LRP10Q7Z4F1 713 aa26.43■■□□□ 1.82
FAM3A-217ENST00000457212 PDGFDQ9GZP0 370 aaPredicted RBP26.43■■□□□ 1.82
FAM3A-217ENST00000457212 USP42Q9H9J4 1324 aaKnown RBP26.42■■□□□ 1.82
FAM3A-217ENST00000457212 ZPR1O75312 459 aa26.42■■□□□ 1.82
FAM3A-217ENST00000457212 PROSER3Q2NL68 480 aa26.42■■□□□ 1.82
FAM3A-217ENST00000457212 DZIP3Q86Y13 1208 aaKnown RBP26.42■■□□□ 1.82
FAM3A-217ENST00000457212 CACNA1FO60840 1977 aa26.4■■□□□ 1.82
FAM3A-217ENST00000457212 ANXA1P04083 346 aa26.4■■□□□ 1.82
FAM3A-217ENST00000457212 TBC1D2BQ9UPU7 963 aa26.4■■□□□ 1.82
FAM3A-217ENST00000457212 RGL2O15211 777 aa26.39■■□□□ 1.82
FAM3A-217ENST00000457212 ARXQ96QS3 562 aa26.39■■□□□ 1.82
FAM3A-217ENST00000457212 MTFR1LQ9H019 292 aa26.39■■□□□ 1.82
FAM3A-217ENST00000457212 KIF6Q6ZMV9 814 aa26.38■■□□□ 1.81
FAM3A-217ENST00000457212 SCN7AQ01118 1682 aa26.38■■□□□ 1.81
FAM3A-217ENST00000457212 GYS1P13807 737 aa26.37■■□□□ 1.81
FAM3A-217ENST00000457212 USPL1Q5W0Q7 1092 aa26.37■■□□□ 1.81
FAM3A-217ENST00000457212 COPS6Q7L5N1 327 aa26.37■■□□□ 1.81
FAM3A-217ENST00000457212 NLGN1Q8N2Q7 840 aa26.37■■□□□ 1.81
FAM3A-217ENST00000457212 XAGE3Q8WTP9 111 aa26.37■■□□□ 1.81
FAM3A-217ENST00000457212 SRP68Q9UHB9 627 aaKnown RBP26.37■■□□□ 1.81
FAM3A-217ENST00000457212 ERVV-1B6SEH8 477 aa26.36■■□□□ 1.81
FAM3A-217ENST00000457212 TCERG1O14776 1098 aaKnown RBP26.36■■□□□ 1.81
FAM3A-217ENST00000457212 CAMTA2O94983 1202 aa26.36■■□□□ 1.81
FAM3A-217ENST00000457212 SLC4A2P04920 1241 aa26.36■■□□□ 1.81
FAM3A-217ENST00000457212 MAP3K15Q6ZN16 1313 aa26.36■■□□□ 1.81
FAM3A-217ENST00000457212 BCORQ6W2J9 1755 aa26.35■■□□□ 1.81
FAM3A-217ENST00000457212 ZBTB7AO95365 584 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms