RNA–Protein interactions for RNA: ENST00000456957.2

PKNOX1-204, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 3

Gene PKNOX1, Length 569 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-204ENST00000456957 LRRC4BQ9NT99 713 aa20.89■□□□□ 0.93
PKNOX1-204ENST00000456957 USP16Q9Y5T5 823 aa20.89■□□□□ 0.93
PKNOX1-204ENST00000456957 SLC27A3Q5K4L6 730 aa20.88■□□□□ 0.93
PKNOX1-204ENST00000456957 TUBGCP6Q96RT7 1819 aa20.88■□□□□ 0.93
PKNOX1-204ENST00000456957 EZH2Q15910 746 aaKnown RBP20.87■□□□□ 0.93
PKNOX1-204ENST00000456957 LINC00116Q8NCU8 138 aa20.87■□□□□ 0.93
PKNOX1-204ENST00000456957 TEX13AQ9BXU3 409 aaPredicted RBP20.87■□□□□ 0.93
PKNOX1-204ENST00000456957 UBR3Q6ZT12 1888 aa20.86■□□□□ 0.93
PKNOX1-204ENST00000456957 CT47B1P0C2W7 299 aaPredicted RBP20.86■□□□□ 0.93
PKNOX1-204ENST00000456957 CYP19A1P11511 503 aaPredicted RBP20.86■□□□□ 0.93
PKNOX1-204ENST00000456957 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
PKNOX1-204ENST00000456957 HDGFL1Q5TGJ6 251 aa20.86■□□□□ 0.93
PKNOX1-204ENST00000456957 NECTIN2Q92692 538 aa20.86■□□□□ 0.93
PKNOX1-204ENST00000456957 STARD3NLO95772 234 aa20.84■□□□□ 0.93
PKNOX1-204ENST00000456957 CNTNAP4Q9C0A0 1308 aa20.82■□□□□ 0.92
PKNOX1-204ENST00000456957 TCERG1O14776 1098 aaKnown RBP20.82■□□□□ 0.92
PKNOX1-204ENST00000456957 CRKLP46109 303 aaKnown RBP20.82■□□□□ 0.92
PKNOX1-204ENST00000456957 QSER1Q2KHR3 1735 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 A1BGP04217 495 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 PIP4K2AP48426 406 aaPredicted RBP20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 INTS5Q6P9B9 1019 aaKnown RBP20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 ZNF428Q96B54 188 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 CHPF2Q9P2E5 772 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 ZBTB1Q9Y2K1 713 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
PKNOX1-204ENST00000456957 ERBB4Q15303 1308 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 NBPF26B4DH59 902 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 PDIA6Q15084 440 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 PROSER3Q2NL68 480 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 NBPF14Q5TI25 921 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 NBPF10Q6P3W6 841 aaKnown RBP20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 NBPF15Q8N660 670 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 SSH1Q8WYL5 1049 aa20.8■□□□□ 0.92
PKNOX1-204ENST00000456957 ANXA1P04083 346 aa20.79■□□□□ 0.92
PKNOX1-204ENST00000456957 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
PKNOX1-204ENST00000456957 RC3H1Q5TC82 1133 aaKnown RBP20.79■□□□□ 0.92
PKNOX1-204ENST00000456957 CHMP4AQ9BY43 222 aa20.79■□□□□ 0.92
PKNOX1-204ENST00000456957 ALDH1L2Q3SY69 923 aa20.78■□□□□ 0.92
PKNOX1-204ENST00000456957 BCL2L13Q9BXK5 485 aa20.78■□□□□ 0.92
PKNOX1-204ENST00000456957 STK31Q9BXU1 1019 aa20.78■□□□□ 0.92
PKNOX1-204ENST00000456957 DBF4Q9UBU7 674 aaPredicted RBP20.78■□□□□ 0.92
PKNOX1-204ENST00000456957 BCORQ6W2J9 1755 aa20.77■□□□□ 0.92
PKNOX1-204ENST00000456957 MYL6BP14649 208 aa20.77■□□□□ 0.92
PKNOX1-204ENST00000456957 CANXP27824 592 aaKnown RBP20.77■□□□□ 0.92
PKNOX1-204ENST00000456957 DDX21Q9NR30 783 aaKnown RBP eCLIP20.77■□□□□ 0.92
PKNOX1-204ENST00000456957 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
PKNOX1-204ENST00000456957 HMGB2P26583 209 aaKnown RBP20.76■□□□□ 0.91
PKNOX1-204ENST00000456957 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
PKNOX1-204ENST00000456957 LRP10Q7Z4F1 713 aa20.76■□□□□ 0.91
PKNOX1-204ENST00000456957 MRPL50Q8N5N7 158 aaKnown RBP20.76■□□□□ 0.91
PKNOX1-204ENST00000456957 AK7Q96M32 723 aa20.76■□□□□ 0.91
PKNOX1-204ENST00000456957 SMC4Q9NTJ3 1288 aa20.76■□□□□ 0.91
PKNOX1-204ENST00000456957 ARFGEF2Q9Y6D5 1785 aa20.75■□□□□ 0.91
PKNOX1-204ENST00000456957 SCN7AQ01118 1682 aa20.75■□□□□ 0.91
PKNOX1-204ENST00000456957 GNPATO15228 680 aa20.75■□□□□ 0.91
PKNOX1-204ENST00000456957 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
PKNOX1-204ENST00000456957 AKT1S1Q96B36 256 aa20.75■□□□□ 0.91
PKNOX1-204ENST00000456957 ANO8Q9HCE9 1232 aaPredicted RBP20.75■□□□□ 0.91
PKNOX1-204ENST00000456957 BCAR3O75815 825 aa20.74■□□□□ 0.91
PKNOX1-204ENST00000456957 IL6STP40189 918 aaPredicted RBP20.74■□□□□ 0.91
PKNOX1-204ENST00000456957 AMIGO3Q86WK7 504 aa20.74■□□□□ 0.91
PKNOX1-204ENST00000456957 HYPKQ9NX55 129 aa20.74■□□□□ 0.91
PKNOX1-204ENST00000456957 COL15A1P39059 1388 aa20.73■□□□□ 0.91
PKNOX1-204ENST00000456957 RPS6KA4O75676 772 aa20.73■□□□□ 0.91
PKNOX1-204ENST00000456957 G2E3Q7L622 706 aa20.73■□□□□ 0.91
PKNOX1-204ENST00000456957 PHAXQ9H814 394 aaKnown RBP20.73■□□□□ 0.91
PKNOX1-204ENST00000456957 ZNF330Q9Y3S2 320 aaPredicted RBP20.73■□□□□ 0.91
PKNOX1-204ENST00000456957 EIF5P55010 431 aaKnown RBP20.72■□□□□ 0.91
PKNOX1-204ENST00000456957 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
PKNOX1-204ENST00000456957 NUP98P52948 1817 aa20.71■□□□□ 0.91
PKNOX1-204ENST00000456957 BRPF1P55201 1214 aaPredicted RBP20.71■□□□□ 0.91
PKNOX1-204ENST00000456957 XAGE3Q8WTP9 111 aa20.71■□□□□ 0.91
PKNOX1-204ENST00000456957 RTCBQ9Y3I0 505 aaKnown RBP20.71■□□□□ 0.91
PKNOX1-204ENST00000456957 ANKRD36CQ5JPF3 1778 aa20.71■□□□□ 0.91
PKNOX1-204ENST00000456957 N4BP2Q86UW6 1770 aaPredicted RBP20.71■□□□□ 0.91
PKNOX1-204ENST00000456957 CENPBP07199 599 aaPredicted RBP20.7■□□□□ 0.9
PKNOX1-204ENST00000456957 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
PKNOX1-204ENST00000456957 PHF14O94880 888 aa20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 AIMP1Q12904 312 aaKnown RBP20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 FLIIQ13045 1269 aa20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 SLC15A2Q16348 729 aa20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 COPS6Q7L5N1 327 aa20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 TFCP2L1Q9NZI6 479 aa20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 KIF16BQ96L93 1317 aa20.69■□□□□ 0.9
PKNOX1-204ENST00000456957 SSFA2P28290 1259 aa20.68■□□□□ 0.9
PKNOX1-204ENST00000456957 TTLL7Q6ZT98 887 aa20.68■□□□□ 0.9
PKNOX1-204ENST00000456957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.67■□□□□ 0.9
PKNOX1-204ENST00000456957 ADRA2BP18089 450 aa20.67■□□□□ 0.9
PKNOX1-204ENST00000456957 NOB1Q9ULX3 412 aaKnown RBP20.67■□□□□ 0.9
PKNOX1-204ENST00000456957 PNPLA7Q6ZV29 1317 aa20.67■□□□□ 0.9
PKNOX1-204ENST00000456957 CASZ1Q86V15 1759 aa20.67■□□□□ 0.9
PKNOX1-204ENST00000456957 AFDNP55196 1824 aaKnown RBP20.67■□□□□ 0.9
PKNOX1-204ENST00000456957 A0A087WZG4 1122 aa20.66■□□□□ 0.9
PKNOX1-204ENST00000456957 TRAPPC3LQ5T215 181 aa20.66■□□□□ 0.9
PKNOX1-204ENST00000456957 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
PKNOX1-204ENST00000456957 DZIP3Q86Y13 1208 aaKnown RBP20.66■□□□□ 0.9
PKNOX1-204ENST00000456957 TBC1D2BQ9UPU7 963 aa20.66■□□□□ 0.9
PKNOX1-204ENST00000456957 PTPRCP08575 1304 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms