RNA–Protein interactions for RNA: ENST00000455527.5

RFTN1P1-202, Transcript of raftlin, lipid raft linker 1 pseudogene 1, humanhuman

BASIC

Gene RFTN1P1, Length 996 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1P1-202ENST00000455527 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
RFTN1P1-202ENST00000455527 STARD3NLO95772 234 aa13.36□□□□□ -0.27
RFTN1P1-202ENST00000455527 NFE2L2Q16236 605 aa13.36□□□□□ -0.27
RFTN1P1-202ENST00000455527 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
RFTN1P1-202ENST00000455527 MAPK8IP3Q9UPT6 1336 aa13.36□□□□□ -0.27
RFTN1P1-202ENST00000455527 DCTN1Q14203 1278 aa13.35□□□□□ -0.27
RFTN1P1-202ENST00000455527 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
RFTN1P1-202ENST00000455527 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
RFTN1P1-202ENST00000455527 CHD4Q14839 1912 aa13.35□□□□□ -0.27
RFTN1P1-202ENST00000455527 KCNQ3O43525 872 aa13.34□□□□□ -0.27
RFTN1P1-202ENST00000455527 YY1P25490 414 aa13.34□□□□□ -0.27
RFTN1P1-202ENST00000455527 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
RFTN1P1-202ENST00000455527 NARFQ9UHQ1 456 aa13.34□□□□□ -0.27
RFTN1P1-202ENST00000455527 LAMB4A4D0S4 1761 aa13.34□□□□□ -0.27
RFTN1P1-202ENST00000455527 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.27
RFTN1P1-202ENST00000455527 IL6STP40189 918 aaPredicted RBP13.33□□□□□ -0.28
RFTN1P1-202ENST00000455527 FKBP8Q14318 412 aa13.33□□□□□ -0.28
RFTN1P1-202ENST00000455527 TAF7Q15545 349 aaPredicted RBP13.33□□□□□ -0.28
RFTN1P1-202ENST00000455527 GPR162Q16538 588 aa13.33□□□□□ -0.28
RFTN1P1-202ENST00000455527 ZPR1O75312 459 aa13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 YBX3P16989 372 aaKnown RBP eCLIP13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 DDR1Q08345 913 aa13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 USPL1Q5W0Q7 1092 aa13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 PARP3Q9Y6F1 533 aa13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
RFTN1P1-202ENST00000455527 A0A087WZG4 1122 aa13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 POLRMTO00411 1230 aaKnown RBP13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 GRIN3BO60391 1043 aa13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 CANXP27824 592 aaKnown RBP13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 TM4SF1P30408 202 aa13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 TGFB2P61812 414 aa13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 BCL2L12Q9HB09 334 aa13.31□□□□□ -0.28
RFTN1P1-202ENST00000455527 BRCA1P38398 1863 aaKnown RBP13.3□□□□□ -0.28
RFTN1P1-202ENST00000455527 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 LMOD3Q0VAK6 560 aa13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 PELP1Q8IZL8 1130 aaKnown RBP13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 USP16Q9Y5T5 823 aa13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 N4BP2Q86UW6 1770 aaPredicted RBP13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
RFTN1P1-202ENST00000455527 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
RFTN1P1-202ENST00000455527 A1BGP04217 495 aa13.28□□□□□ -0.28
RFTN1P1-202ENST00000455527 RIPK4P57078 832 aa13.28□□□□□ -0.28
RFTN1P1-202ENST00000455527 NFIXQ14938 502 aa13.28□□□□□ -0.28
RFTN1P1-202ENST00000455527 THUMPD2Q9BTF0 503 aaKnown RBP13.28□□□□□ -0.28
RFTN1P1-202ENST00000455527 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
RFTN1P1-202ENST00000455527 ZNF316A6NFI3 1004 aaPredicted RBP13.27□□□□□ -0.29
RFTN1P1-202ENST00000455527 RGL2O15211 777 aa13.27□□□□□ -0.29
RFTN1P1-202ENST00000455527 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
RFTN1P1-202ENST00000455527 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
RFTN1P1-202ENST00000455527 CAMTA2O94983 1202 aa13.26□□□□□ -0.29
RFTN1P1-202ENST00000455527 MIS18AQ9NYP9 233 aa13.26□□□□□ -0.29
RFTN1P1-202ENST00000455527 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
RFTN1P1-202ENST00000455527 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
RFTN1P1-202ENST00000455527 CARMIL3Q8ND23 1372 aa13.25□□□□□ -0.29
RFTN1P1-202ENST00000455527 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
RFTN1P1-202ENST00000455527 NPM2Q86SE8 214 aaKnown RBP13.25□□□□□ -0.29
RFTN1P1-202ENST00000455527 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
RFTN1P1-202ENST00000455527 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
RFTN1P1-202ENST00000455527 ADCY9O60503 1353 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 SERPINB2P05120 415 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 DPEP1P16444 411 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 KCNA3P22001 575 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 DZIP3Q86Y13 1208 aaKnown RBP13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 NBPF15Q8N660 670 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 ZNF784Q8NCA9 323 aaPredicted RBP13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 TBC1D2BQ9UPU7 963 aa13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 ZNF330Q9Y3S2 320 aaPredicted RBP13.24□□□□□ -0.29
RFTN1P1-202ENST00000455527 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
RFTN1P1-202ENST00000455527 PIP4K2AP48426 406 aaPredicted RBP13.23□□□□□ -0.29
RFTN1P1-202ENST00000455527 TBC1D9BQ66K14 1250 aa13.23□□□□□ -0.29
RFTN1P1-202ENST00000455527 CLEC4GQ6UXB4 293 aa13.23□□□□□ -0.29
RFTN1P1-202ENST00000455527 TRIM35Q9UPQ4 493 aa13.23□□□□□ -0.29
RFTN1P1-202ENST00000455527 RRP7AQ9Y3A4 280 aaKnown RBP13.23□□□□□ -0.29
RFTN1P1-202ENST00000455527 ANKRD31Q8N7Z5 1873 aa13.22□□□□□ -0.29
RFTN1P1-202ENST00000455527 PIAS4Q8N2W9 510 aaPredicted RBP13.21□□□□□ -0.29
RFTN1P1-202ENST00000455527 PIM2Q9P1W9 311 aa13.21□□□□□ -0.29
RFTN1P1-202ENST00000455527 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
RFTN1P1-202ENST00000455527 BCS1LQ9Y276 419 aa13.21□□□□□ -0.29
RFTN1P1-202ENST00000455527 ZNF652Q9Y2D9 606 aa13.21□□□□□ -0.29
RFTN1P1-202ENST00000455527 COL11A2P13942 1736 aaPredicted RBP13.2□□□□□ -0.3
RFTN1P1-202ENST00000455527 CHL1O00533 1208 aa13.2□□□□□ -0.3
RFTN1P1-202ENST00000455527 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
RFTN1P1-202ENST00000455527 PRR5LQ6MZQ0 368 aa13.2□□□□□ -0.3
RFTN1P1-202ENST00000455527 BICDL1Q6ZP65 573 aa13.2□□□□□ -0.3
RFTN1P1-202ENST00000455527 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
RFTN1P1-202ENST00000455527 CHRNA5P30532 468 aa13.19□□□□□ -0.3
RFTN1P1-202ENST00000455527 SETDB2Q96T68 719 aa13.19□□□□□ -0.3
RFTN1P1-202ENST00000455527 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
RFTN1P1-202ENST00000455527 ERVV-1B6SEH8 477 aa13.18□□□□□ -0.3
RFTN1P1-202ENST00000455527 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
RFTN1P1-202ENST00000455527 DALRD3Q5D0E6 543 aaKnown RBP13.18□□□□□ -0.3
RFTN1P1-202ENST00000455527 LRP10Q7Z4F1 713 aa13.18□□□□□ -0.3
RFTN1P1-202ENST00000455527 CNBD1Q8NA66 436 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms