RNA–Protein interactions for RNA: ENST00000454964.3

ATXN3-205, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-205ENST00000454964 TFCP2L1Q9NZI6 479 aa12.26□□□□□ -0.45
ATXN3-205ENST00000454964 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
ATXN3-205ENST00000454964 RGL2O15211 777 aa12.25□□□□□ -0.45
ATXN3-205ENST00000454964 RPS6KA4O75676 772 aa12.25□□□□□ -0.45
ATXN3-205ENST00000454964 SSFA2P28290 1259 aa12.25□□□□□ -0.45
ATXN3-205ENST00000454964 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
ATXN3-205ENST00000454964 MBIPQ9NS73 344 aa12.25□□□□□ -0.45
ATXN3-205ENST00000454964 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
ATXN3-205ENST00000454964 C5P01031 1676 aa12.24□□□□□ -0.45
ATXN3-205ENST00000454964 IL6STP40189 918 aaPredicted RBP12.24□□□□□ -0.45
ATXN3-205ENST00000454964 TRAPPC3LQ5T215 181 aa12.24□□□□□ -0.45
ATXN3-205ENST00000454964 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
ATXN3-205ENST00000454964 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
ATXN3-205ENST00000454964 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
ATXN3-205ENST00000454964 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
ATXN3-205ENST00000454964 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
ATXN3-205ENST00000454964 CYP19A1P11511 503 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-205ENST00000454964 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
ATXN3-205ENST00000454964 MIS18AQ9NYP9 233 aa12.23□□□□□ -0.45
ATXN3-205ENST00000454964 DBF4Q9UBU7 674 aaPredicted RBP12.23□□□□□ -0.45
ATXN3-205ENST00000454964 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
ATXN3-205ENST00000454964 RFC4P35249 363 aa12.22□□□□□ -0.45
ATXN3-205ENST00000454964 CRKLP46109 303 aaKnown RBP12.22□□□□□ -0.45
ATXN3-205ENST00000454964 SLFN5Q08AF3 891 aa12.22□□□□□ -0.45
ATXN3-205ENST00000454964 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
ATXN3-205ENST00000454964 STK31Q9BXU1 1019 aa12.22□□□□□ -0.45
ATXN3-205ENST00000454964 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
ATXN3-205ENST00000454964 NUP188Q5SRE5 1749 aa12.22□□□□□ -0.45
ATXN3-205ENST00000454964 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
ATXN3-205ENST00000454964 ZPR1O75312 459 aa12.21□□□□□ -0.45
ATXN3-205ENST00000454964 ATXN8OSP0DMR3 200 aa12.21□□□□□ -0.45
ATXN3-205ENST00000454964 DUSP27Q5VZP5 1158 aa12.21□□□□□ -0.45
ATXN3-205ENST00000454964 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
ATXN3-205ENST00000454964 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
ATXN3-205ENST00000454964 GNPATO15228 680 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 KCNQ3O43525 872 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 ITPK1Q13572 414 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 TWISTNBQ3B726 338 aaPredicted RBP12.2□□□□□ -0.46
ATXN3-205ENST00000454964 SAMD1Q6SPF0 538 aaPredicted RBP12.2□□□□□ -0.46
ATXN3-205ENST00000454964 NLGN1Q8N2Q7 840 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 LINC00116Q8NCU8 138 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 SLC4A9Q96Q91 983 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
ATXN3-205ENST00000454964 ZNF652Q9Y2D9 606 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 USP16Q9Y5T5 823 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
ATXN3-205ENST00000454964 MYH14Q7Z406 1995 aaKnown RBP12.19□□□□□ -0.46
ATXN3-205ENST00000454964 HDGFL1Q5TGJ6 251 aa12.19□□□□□ -0.46
ATXN3-205ENST00000454964 CLEC4GQ6UXB4 293 aa12.19□□□□□ -0.46
ATXN3-205ENST00000454964 TRMT2AQ8IZ69 625 aaKnown RBP12.19□□□□□ -0.46
ATXN3-205ENST00000454964 UBR3Q6ZT12 1888 aa12.19□□□□□ -0.46
ATXN3-205ENST00000454964 FANCIQ9NVI1 1328 aa12.18□□□□□ -0.46
ATXN3-205ENST00000454964 DDX58O95786 925 aaKnown RBP12.18□□□□□ -0.46
ATXN3-205ENST00000454964 EIF2S2P20042 333 aaKnown RBP12.18□□□□□ -0.46
ATXN3-205ENST00000454964 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
ATXN3-205ENST00000454964 INTS5Q6P9B9 1019 aaKnown RBP12.18□□□□□ -0.46
ATXN3-205ENST00000454964 TJP1Q07157 1748 aa12.17□□□□□ -0.46
ATXN3-205ENST00000454964 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
ATXN3-205ENST00000454964 ERVV-1B6SEH8 477 aa12.17□□□□□ -0.46
ATXN3-205ENST00000454964 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
ATXN3-205ENST00000454964 C1QBPQ07021 282 aaKnown RBP12.17□□□□□ -0.46
ATXN3-205ENST00000454964 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
ATXN3-205ENST00000454964 KIF6Q6ZMV9 814 aa12.17□□□□□ -0.46
ATXN3-205ENST00000454964 NARFQ9UHQ1 456 aa12.17□□□□□ -0.46
ATXN3-205ENST00000454964 POLD1P28340 1107 aa12.16□□□□□ -0.46
ATXN3-205ENST00000454964 EXOSC9Q06265 439 aaKnown RBP12.16□□□□□ -0.46
ATXN3-205ENST00000454964 R3HDM1Q15032 1099 aaKnown RBP12.16□□□□□ -0.46
ATXN3-205ENST00000454964 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
ATXN3-205ENST00000454964 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
ATXN3-205ENST00000454964 MTFR1LQ9H019 292 aa12.16□□□□□ -0.46
ATXN3-205ENST00000454964 VAMP4O75379 141 aa12.15□□□□□ -0.46
ATXN3-205ENST00000454964 A1BGP04217 495 aa12.15□□□□□ -0.46
ATXN3-205ENST00000454964 KCNQ4P56696 695 aa12.15□□□□□ -0.46
ATXN3-205ENST00000454964 C8orf58Q8NAV2 365 aa12.15□□□□□ -0.46
ATXN3-205ENST00000454964 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
ATXN3-205ENST00000454964 SPON1Q9HCB6 807 aa12.15□□□□□ -0.46
ATXN3-205ENST00000454964 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
ATXN3-205ENST00000454964 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
ATXN3-205ENST00000454964 HSP90B1P14625 803 aaKnown RBP12.14□□□□□ -0.47
ATXN3-205ENST00000454964 ZNF827Q17R98 1081 aa12.14□□□□□ -0.47
ATXN3-205ENST00000454964 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
ATXN3-205ENST00000454964 ARXQ96QS3 562 aa12.14□□□□□ -0.47
ATXN3-205ENST00000454964 COL15A1P39059 1388 aa12.14□□□□□ -0.47
ATXN3-205ENST00000454964 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
ATXN3-205ENST00000454964 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
ATXN3-205ENST00000454964 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
ATXN3-205ENST00000454964 COL23A1Q86Y22 540 aaPredicted RBP12.13□□□□□ -0.47
ATXN3-205ENST00000454964 PHF14O94880 888 aa12.12□□□□□ -0.47
ATXN3-205ENST00000454964 MYL6BP14649 208 aa12.12□□□□□ -0.47
ATXN3-205ENST00000454964 BRPF1P55201 1214 aaPredicted RBP12.12□□□□□ -0.47
ATXN3-205ENST00000454964 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
ATXN3-205ENST00000454964 PDZRN3Q9UPQ7 1066 aa12.12□□□□□ -0.47
ATXN3-205ENST00000454964 ZNF330Q9Y3S2 320 aaPredicted RBP12.12□□□□□ -0.47
ATXN3-205ENST00000454964 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
ATXN3-205ENST00000454964 MS4A1P11836 297 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 TSPYL6Q8N831 410 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 PLBD2Q8NHP8 589 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
ATXN3-205ENST00000454964 SETDB2Q96T68 719 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms