RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SSH1Q8WYL5 1049 aa14.46□□□□□ -0.09
TRAF4-206ENST00000454852 ITPK1Q13572 414 aa14.45□□□□□ -0.1
TRAF4-206ENST00000454852 PDIA6Q15084 440 aa14.45□□□□□ -0.1
TRAF4-206ENST00000454852 MRPL50Q8N5N7 158 aaKnown RBP14.45□□□□□ -0.1
TRAF4-206ENST00000454852 DBF4Q9UBU7 674 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-206ENST00000454852 CNTNAP4Q9C0A0 1308 aa14.44□□□□□ -0.1
TRAF4-206ENST00000454852 APBA3O96018 575 aa14.44□□□□□ -0.1
TRAF4-206ENST00000454852 RC3H1Q5TC82 1133 aaKnown RBP14.44□□□□□ -0.1
TRAF4-206ENST00000454852 LRP10Q7Z4F1 713 aa14.44□□□□□ -0.1
TRAF4-206ENST00000454852 PROM2Q8N271 834 aa14.44□□□□□ -0.1
TRAF4-206ENST00000454852 DDX21Q9NR30 783 aaKnown RBP eCLIP14.44□□□□□ -0.1
TRAF4-206ENST00000454852 CCNL1Q9UK58 526 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-206ENST00000454852 TXNRD1Q16881 649 aa14.43□□□□□ -0.1
TRAF4-206ENST00000454852 CAMKK2Q96RR4 588 aa14.43□□□□□ -0.1
TRAF4-206ENST00000454852 STK31Q9BXU1 1019 aa14.43□□□□□ -0.1
TRAF4-206ENST00000454852 KIF16BQ96L93 1317 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 C4BP0C0L5 1744 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 NBPF26B4DH59 902 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
TRAF4-206ENST00000454852 NBPF14Q5TI25 921 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 NBPF10Q6P3W6 841 aaKnown RBP14.42□□□□□ -0.1
TRAF4-206ENST00000454852 NBPF15Q8N660 670 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 LINC00116Q8NCU8 138 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 ARHGAP45Q92619 1136 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 LRRC4BQ9NT99 713 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 HYPKQ9NX55 129 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 CHPF2Q9P2E5 772 aa14.42□□□□□ -0.1
TRAF4-206ENST00000454852 MYH14Q7Z406 1995 aaKnown RBP14.42□□□□□ -0.1
TRAF4-206ENST00000454852 BCAR3O75815 825 aa14.41□□□□□ -0.1
TRAF4-206ENST00000454852 SLC4A2P04920 1241 aa14.41□□□□□ -0.1
TRAF4-206ENST00000454852 IL6STP40189 918 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-206ENST00000454852 BAG6P46379 1132 aa14.41□□□□□ -0.1
TRAF4-206ENST00000454852 INTS5Q6P9B9 1019 aaKnown RBP14.41□□□□□ -0.1
TRAF4-206ENST00000454852 CCDC87Q9NVE4 849 aa14.41□□□□□ -0.1
TRAF4-206ENST00000454852 PTPRCP08575 1304 aa14.41□□□□□ -0.1
TRAF4-206ENST00000454852 CRKLP46109 303 aaKnown RBP14.4□□□□□ -0.1
TRAF4-206ENST00000454852 SF3B2Q13435 895 aaKnown RBP14.4□□□□□ -0.1
TRAF4-206ENST00000454852 A1BGP04217 495 aa14.39□□□□□ -0.11
TRAF4-206ENST00000454852 EIF5P55010 431 aaKnown RBP14.39□□□□□ -0.11
TRAF4-206ENST00000454852 PROSER3Q2NL68 480 aa14.39□□□□□ -0.11
TRAF4-206ENST00000454852 ZBTB1Q9Y2K1 713 aa14.39□□□□□ -0.11
TRAF4-206ENST00000454852 RGL2O15211 777 aa14.38□□□□□ -0.11
TRAF4-206ENST00000454852 IPO8O15397 1037 aaKnown RBP14.38□□□□□ -0.11
TRAF4-206ENST00000454852 FLIIQ13045 1269 aa14.38□□□□□ -0.11
TRAF4-206ENST00000454852 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.38□□□□□ -0.11
TRAF4-206ENST00000454852 NECTIN2Q92692 538 aa14.38□□□□□ -0.11
TRAF4-206ENST00000454852 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRAF4-206ENST00000454852 BCL2L13Q9BXK5 485 aa14.38□□□□□ -0.11
TRAF4-206ENST00000454852 NUP188Q5SRE5 1749 aa14.38□□□□□ -0.11
TRAF4-206ENST00000454852 RPS6KA4O75676 772 aa14.37□□□□□ -0.11
TRAF4-206ENST00000454852 RRP1P56182 461 aaKnown RBP14.37□□□□□ -0.11
TRAF4-206ENST00000454852 G2E3Q7L622 706 aa14.37□□□□□ -0.11
TRAF4-206ENST00000454852 UBR3Q6ZT12 1888 aa14.37□□□□□ -0.11
TRAF4-206ENST00000454852 IBTKQ9P2D0 1353 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 QSER1Q2KHR3 1735 aa14.36□□□□□ -0.11
TRAF4-206ENST00000454852 TCERG1O14776 1098 aaKnown RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 ADRA2BP18089 450 aa14.36□□□□□ -0.11
TRAF4-206ENST00000454852 EN1Q05925 392 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
TRAF4-206ENST00000454852 ATF7IPQ6VMQ6 1270 aa14.36□□□□□ -0.11
TRAF4-206ENST00000454852 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
TRAF4-206ENST00000454852 API5Q9BZZ5 524 aaKnown RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 PHAXQ9H814 394 aaKnown RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 NOB1Q9ULX3 412 aaKnown RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 N4BP2Q86UW6 1770 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-206ENST00000454852 PXDNLA1KZ92 1463 aa14.36□□□□□ -0.11
TRAF4-206ENST00000454852 ANXA1P04083 346 aa14.35□□□□□ -0.11
TRAF4-206ENST00000454852 MS4A1P11836 297 aa14.35□□□□□ -0.11
TRAF4-206ENST00000454852 TRIM27P14373 513 aa14.35□□□□□ -0.11
TRAF4-206ENST00000454852 KCNQ4P56696 695 aa14.35□□□□□ -0.11
TRAF4-206ENST00000454852 PDE3AQ14432 1141 aa14.35□□□□□ -0.11
TRAF4-206ENST00000454852 EZH2Q15910 746 aaKnown RBP14.35□□□□□ -0.11
TRAF4-206ENST00000454852 ILDR2Q71H61 639 aa14.35□□□□□ -0.11
TRAF4-206ENST00000454852 COL15A1P39059 1388 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 A0A087WZG4 1122 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 DDX58O95786 925 aaKnown RBP14.34□□□□□ -0.11
TRAF4-206ENST00000454852 MYL6BP14649 208 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 CANXP27824 592 aaKnown RBP14.34□□□□□ -0.11
TRAF4-206ENST00000454852 KSR2Q6VAB6 950 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 COPS6Q7L5N1 327 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 XAGE3Q8WTP9 111 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 SUPT16HQ9Y5B9 1047 aaKnown RBP14.34□□□□□ -0.11
TRAF4-206ENST00000454852 ABCC4O15439 1325 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 ADCY9O60503 1353 aa14.34□□□□□ -0.11
TRAF4-206ENST00000454852 ATP10DQ9P241 1426 aa14.33□□□□□ -0.11
TRAF4-206ENST00000454852 BCORQ6W2J9 1755 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 ERVV-1B6SEH8 477 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 SSFA2P28290 1259 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 DEFB132Q7Z7B7 95 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 PLBD2Q8NHP8 589 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 AK7Q96M32 723 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 RTCBQ9Y3I0 505 aaKnown RBP14.33□□□□□ -0.12
TRAF4-206ENST00000454852 SCN7AQ01118 1682 aa14.33□□□□□ -0.12
TRAF4-206ENST00000454852 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
TRAF4-206ENST00000454852 GNPATO15228 680 aa14.32□□□□□ -0.12
TRAF4-206ENST00000454852 PIP4K2AP48426 406 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-206ENST00000454852 FKBP5Q13451 457 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-206ENST00000454852 ANKRD13DQ6ZTN6 518 aa14.32□□□□□ -0.12
TRAF4-206ENST00000454852 FRAT1Q92837 279 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms