RNA–Protein interactions for RNA: ENST00000454477.1

LINC01875-201, Transcript of long intergenic non-protein coding RNA 1875, humanhuman

TSL 1 (best) BASIC

Gene LINC01875, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01875-201ENST00000454477 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
LINC01875-201ENST00000454477 ASAP1Q9ULH1 1129 aa17.07■□□□□ 0.32
LINC01875-201ENST00000454477 SBF1O95248 1867 aa17.06■□□□□ 0.32
LINC01875-201ENST00000454477 MAP2K1Q02750 393 aaPredicted RBP17.06■□□□□ 0.32
LINC01875-201ENST00000454477 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
LINC01875-201ENST00000454477 NFATC2IPQ8NCF5 419 aa17.06■□□□□ 0.32
LINC01875-201ENST00000454477 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
LINC01875-201ENST00000454477 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
LINC01875-201ENST00000454477 SLC52A2Q9HAB3 445 aa17.05■□□□□ 0.32
LINC01875-201ENST00000454477 GNAT3A8MTJ3 354 aa17.04■□□□□ 0.32
LINC01875-201ENST00000454477 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
LINC01875-201ENST00000454477 SSFA2P28290 1259 aa17.03■□□□□ 0.32
LINC01875-201ENST00000454477 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
LINC01875-201ENST00000454477 RC3H1Q5TC82 1133 aaKnown RBP17.03■□□□□ 0.32
LINC01875-201ENST00000454477 GCC1Q96CN9 775 aa17.03■□□□□ 0.32
LINC01875-201ENST00000454477 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
LINC01875-201ENST00000454477 KDM6AO15550 1401 aaPredicted RBP17.03■□□□□ 0.32
LINC01875-201ENST00000454477 C4BP0C0L5 1744 aa17.02■□□□□ 0.32
LINC01875-201ENST00000454477 COL3A1P02461 1466 aaPredicted RBP17.02■□□□□ 0.32
LINC01875-201ENST00000454477 DPEP1P16444 411 aa17.02■□□□□ 0.32
LINC01875-201ENST00000454477 TEFQ10587 303 aa17.02■□□□□ 0.32
LINC01875-201ENST00000454477 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
LINC01875-201ENST00000454477 RSPH6AQ9H0K4 717 aa17.02■□□□□ 0.32
LINC01875-201ENST00000454477 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
LINC01875-201ENST00000454477 CHADLQ6NUI6 762 aa17.01■□□□□ 0.31
LINC01875-201ENST00000454477 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
LINC01875-201ENST00000454477 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
LINC01875-201ENST00000454477 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17■□□□□ 0.31
LINC01875-201ENST00000454477 MMP10P09238 476 aa17■□□□□ 0.31
LINC01875-201ENST00000454477 ADRA2BP18089 450 aa17■□□□□ 0.31
LINC01875-201ENST00000454477 LGR6Q9HBX8 967 aa17■□□□□ 0.31
LINC01875-201ENST00000454477 RTCBQ9Y3I0 505 aaKnown RBP17■□□□□ 0.31
LINC01875-201ENST00000454477 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
LINC01875-201ENST00000454477 TTC5Q8N0Z6 440 aa16.99■□□□□ 0.31
LINC01875-201ENST00000454477 PASKQ96RG2 1323 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
LINC01875-201ENST00000454477 POTECB2RU33 542 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 GNPATO15228 680 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
LINC01875-201ENST00000454477 KCNA3P22001 575 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 TRAPPC3LQ5T215 181 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 VSIG10Q8N0Z9 540 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 LINC00116Q8NCU8 138 aa16.98■□□□□ 0.31
LINC01875-201ENST00000454477 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
LINC01875-201ENST00000454477 PHF14O94880 888 aa16.97■□□□□ 0.31
LINC01875-201ENST00000454477 ITPK1Q13572 414 aa16.97■□□□□ 0.31
LINC01875-201ENST00000454477 TEX13AQ9BXU3 409 aaPredicted RBP16.97■□□□□ 0.31
LINC01875-201ENST00000454477 PIM2Q9P1W9 311 aa16.97■□□□□ 0.31
LINC01875-201ENST00000454477 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
LINC01875-201ENST00000454477 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
LINC01875-201ENST00000454477 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.3
LINC01875-201ENST00000454477 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
LINC01875-201ENST00000454477 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
LINC01875-201ENST00000454477 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
LINC01875-201ENST00000454477 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
LINC01875-201ENST00000454477 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
LINC01875-201ENST00000454477 THSD7BQ9C0I4 1608 aa16.95■□□□□ 0.3
LINC01875-201ENST00000454477 STARD3NLO95772 234 aa16.94■□□□□ 0.3
LINC01875-201ENST00000454477 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
LINC01875-201ENST00000454477 LMNB1P20700 586 aa16.93■□□□□ 0.3
LINC01875-201ENST00000454477 RFC4P35249 363 aa16.93■□□□□ 0.3
LINC01875-201ENST00000454477 NLGN1Q8N2Q7 840 aa16.93■□□□□ 0.3
LINC01875-201ENST00000454477 BEGAINQ9BUH8 593 aa16.93■□□□□ 0.3
LINC01875-201ENST00000454477 TIAM2Q8IVF5 1701 aa16.93■□□□□ 0.3
LINC01875-201ENST00000454477 DLL1O00548 723 aa16.92■□□□□ 0.3
LINC01875-201ENST00000454477 WDR43Q15061 677 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC01875-201ENST00000454477 ZNF790Q6PG37 636 aa16.92■□□□□ 0.3
LINC01875-201ENST00000454477 PNISRQ8TF01 805 aaKnown RBP16.92■□□□□ 0.3
LINC01875-201ENST00000454477 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
LINC01875-201ENST00000454477 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
LINC01875-201ENST00000454477 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
LINC01875-201ENST00000454477 BTBD11A6QL63 1104 aa16.91■□□□□ 0.3
LINC01875-201ENST00000454477 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
LINC01875-201ENST00000454477 SLC39A6Q13433 755 aa16.91■□□□□ 0.3
LINC01875-201ENST00000454477 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
LINC01875-201ENST00000454477 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
LINC01875-201ENST00000454477 PRKRIP1Q9H875 184 aaPredicted RBP16.91■□□□□ 0.3
LINC01875-201ENST00000454477 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
LINC01875-201ENST00000454477 DEFB115Q30KQ5 88 aa16.9■□□□□ 0.3
LINC01875-201ENST00000454477 HABP4Q5JVS0 413 aaKnown RBP16.9■□□□□ 0.3
LINC01875-201ENST00000454477 MRC1P22897 1456 aa16.9■□□□□ 0.3
LINC01875-201ENST00000454477 ITGB4P16144 1822 aa16.89■□□□□ 0.29
LINC01875-201ENST00000454477 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.29
LINC01875-201ENST00000454477 NFE2L2Q16236 605 aa16.89■□□□□ 0.29
LINC01875-201ENST00000454477 C4AP0C0L4 1744 aa16.89■□□□□ 0.29
LINC01875-201ENST00000454477 A0A087WZG4 1122 aa16.88■□□□□ 0.29
LINC01875-201ENST00000454477 RASSF7Q02833 373 aa16.88■□□□□ 0.29
LINC01875-201ENST00000454477 DPY19L2Q6NUT2 758 aa16.88■□□□□ 0.29
LINC01875-201ENST00000454477 DNAJC10Q8IXB1 793 aa16.88■□□□□ 0.29
LINC01875-201ENST00000454477 ARHGEF1Q92888 912 aaKnown RBP16.88■□□□□ 0.29
LINC01875-201ENST00000454477 PLEKHF1Q96S99 279 aa16.88■□□□□ 0.29
LINC01875-201ENST00000454477 ZPR1O75312 459 aa16.87■□□□□ 0.29
LINC01875-201ENST00000454477 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
LINC01875-201ENST00000454477 POTEJP0CG39 1038 aa16.87■□□□□ 0.29
LINC01875-201ENST00000454477 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
LINC01875-201ENST00000454477 SOX10P56693 466 aa16.86■□□□□ 0.29
LINC01875-201ENST00000454477 DGKZQ13574 1117 aa16.86■□□□□ 0.29
LINC01875-201ENST00000454477 LTBP1Q14766 1721 aa16.86■□□□□ 0.29
LINC01875-201ENST00000454477 INTS5Q6P9B9 1019 aaKnown RBP16.85■□□□□ 0.29
LINC01875-201ENST00000454477 MCM10Q7L590 875 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms