RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TGFB2P61812 414 aa8.21□□□□□ -1.1
HLA-DPA3-207ENST00000454398 DALRD3Q5D0E6 543 aaKnown RBP8.21□□□□□ -1.1
HLA-DPA3-207ENST00000454398 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
HLA-DPA3-207ENST00000454398 USPL1Q5W0Q7 1092 aa8.21□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CCDC24Q8N4L8 307 aa8.21□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CCDC88AQ3V6T2 1871 aa8.21□□□□□ -1.1
HLA-DPA3-207ENST00000454398 COL3A1P02461 1466 aaPredicted RBP8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CAPN15O75808 1086 aa8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 TOMM70O94826 608 aa8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 APLP1P51693 650 aa8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 EIF4G2P78344 907 aaKnown RBP eCLIP8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 NFIXQ14938 502 aa8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 AMER1Q5JTC6 1135 aaPredicted RBP8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 BICDL1Q6ZP65 573 aa8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 ZNF330Q9Y3S2 320 aaPredicted RBP8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 SIPA1L3O60292 1781 aaPredicted RBP8.2□□□□□ -1.1
HLA-DPA3-207ENST00000454398 TM4SF1P30408 202 aa8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 AMOTQ4VCS5 1084 aa8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 SLC52A2Q9HAB3 445 aa8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 PIM2Q9P1W9 311 aa8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 ZNF219Q9P2Y4 722 aaPredicted RBP8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 KIF7Q2M1P5 1343 aa8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 BCORQ6W2J9 1755 aa8.19□□□□□ -1.1
HLA-DPA3-207ENST00000454398 HMGB2P26583 209 aaKnown RBP8.18□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CANXP27824 592 aaKnown RBP8.18□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CC2D1BQ5T0F9 858 aaKnown RBP8.18□□□□□ -1.1
HLA-DPA3-207ENST00000454398 COL13A1Q5TAT6 717 aaPredicted RBP8.18□□□□□ -1.1
HLA-DPA3-207ENST00000454398 C16orf71Q8IYS4 520 aaPredicted RBP8.18□□□□□ -1.1
HLA-DPA3-207ENST00000454398 RRAGCQ9HB90 399 aa8.18□□□□□ -1.1
HLA-DPA3-207ENST00000454398 POTECB2RU33 542 aa8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 NFKBIEO00221 500 aa8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 RNMTO43148 476 aaKnown RBP8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 ZPR1O75312 459 aa8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CYP19A1P11511 503 aaPredicted RBP8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 PIP4K2AP48426 406 aaPredicted RBP8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 MTHFSDQ2M296 383 aaKnown RBP8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 SLC51AQ86UW1 340 aa8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 RBM46Q8TBY0 533 aaKnown RBP8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 KNSTRNQ9Y448 316 aa8.17□□□□□ -1.1
HLA-DPA3-207ENST00000454398 KCNQ3O43525 872 aa8.16□□□□□ -1.1
HLA-DPA3-207ENST00000454398 AKAP4Q5JQC9 854 aa8.16□□□□□ -1.1
HLA-DPA3-207ENST00000454398 C2CD5Q86YS7 1000 aa8.16□□□□□ -1.1
HLA-DPA3-207ENST00000454398 KDM2BQ8NHM5 1336 aa8.16□□□□□ -1.1
HLA-DPA3-207ENST00000454398 KLRG1Q96E93 195 aa8.16□□□□□ -1.1
HLA-DPA3-207ENST00000454398 FER1L6Q2WGJ9 1857 aa8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 SLX4Q8IY92 1834 aa8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 PER1O15534 1290 aaPredicted RBP8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 SERPINB2P05120 415 aa8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 POTEIP0CG38 1075 aa8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 POTEJP0CG39 1038 aa8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 TBC1D9BQ66K14 1250 aa8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 CCER1Q8TC90 406 aaPredicted RBP8.15□□□□□ -1.1
HLA-DPA3-207ENST00000454398 U2SURPO15042 1029 aaKnown RBP8.14□□□□□ -1.11
HLA-DPA3-207ENST00000454398 JMYQ8N9B5 988 aa8.14□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ZNF496Q96IT1 587 aaPredicted RBP8.14□□□□□ -1.11
HLA-DPA3-207ENST00000454398 NARFQ9UHQ1 456 aa8.14□□□□□ -1.11
HLA-DPA3-207ENST00000454398 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ARFGEF2Q9Y6D5 1785 aa8.14□□□□□ -1.11
HLA-DPA3-207ENST00000454398 CLSPNQ9HAW4 1339 aa8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 LMNB1P20700 586 aa8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 SMC1BQ8NDV3 1235 aa8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 IL17REQ8NFR9 667 aa8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ZNF622Q969S3 477 aaKnown RBP eCLIP8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 DICER1Q9UPY3 1922 aaKnown RBP8.13□□□□□ -1.11
HLA-DPA3-207ENST00000454398 HEG1Q9ULI3 1381 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 C21orf2O43822 256 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 DIAPH1O60610 1272 aaKnown RBP8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 FSTL1Q12841 308 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 PRR5LQ6MZQ0 368 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 OLFM4Q6UX06 510 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 TTC5Q8N0Z6 440 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 TTLL6Q8N841 843 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 TIMELESSQ9UNS1 1208 aa8.12□□□□□ -1.11
HLA-DPA3-207ENST00000454398 A1BGP04217 495 aa8.11□□□□□ -1.11
HLA-DPA3-207ENST00000454398 HSPA1AP0DMV8 641 aaKnown RBP8.11□□□□□ -1.11
HLA-DPA3-207ENST00000454398 HSPA1BP0DMV9 641 aaKnown RBP8.11□□□□□ -1.11
HLA-DPA3-207ENST00000454398 PHACTR3Q96KR7 559 aa8.11□□□□□ -1.11
HLA-DPA3-207ENST00000454398 LAMB4A4D0S4 1761 aa8.11□□□□□ -1.11
HLA-DPA3-207ENST00000454398 COL4A5P29400 1685 aa8.11□□□□□ -1.11
HLA-DPA3-207ENST00000454398 GLTPD2A6NH11 291 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 H0YIN7 160 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 NPHP1O15259 732 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 CAMTA2O94983 1202 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 PRKAR2BP31323 418 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 TEFQ10587 303 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ERFEQ4G0M1 354 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 PRPF40BQ6NWY9 871 aaKnown RBP8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ZNF790Q6PG37 636 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 TNS4Q8IZW8 715 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 CNBD1Q8NA66 436 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 MKRN1Q9UHC7 482 aaKnown RBP8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ZNF541Q9H0D2 1346 aa8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 ZC3H4Q9UPT8 1303 aaKnown RBP8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 FAM177BA6PVY3 158 aa8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 STARD3NLO95772 234 aa8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 VEGFAP15692 232 aaPredicted RBP8.09□□□□□ -1.11
HLA-DPA3-207ENST00000454398 DCTN1Q14203 1278 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms