RNA–Protein interactions for RNA: ENST00000454244.4

LMCD1-205, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-205ENST00000454244 COL15A1P39059 1388 aa14.31□□□□□ -0.12
LMCD1-205ENST00000454244 HTATSF1O43719 755 aaKnown RBP14.3□□□□□ -0.12
LMCD1-205ENST00000454244 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
LMCD1-205ENST00000454244 C10orf71Q711Q0 1435 aa14.3□□□□□ -0.12
LMCD1-205ENST00000454244 TGFB2P61812 414 aa14.29□□□□□ -0.12
LMCD1-205ENST00000454244 PLEKHF1Q96S99 279 aa14.29□□□□□ -0.12
LMCD1-205ENST00000454244 PXDNLA1KZ92 1463 aa14.29□□□□□ -0.12
LMCD1-205ENST00000454244 C4AP0C0L4 1744 aa14.29□□□□□ -0.12
LMCD1-205ENST00000454244 A0A0G2JLW4 131 aa14.28□□□□□ -0.12
LMCD1-205ENST00000454244 DPEP1P16444 411 aa14.28□□□□□ -0.12
LMCD1-205ENST00000454244 TM4SF1P30408 202 aa14.28□□□□□ -0.12
LMCD1-205ENST00000454244 EIF5P55010 431 aaKnown RBP14.28□□□□□ -0.12
LMCD1-205ENST00000454244 VIRMAQ69YN4 1812 aaKnown RBP14.27□□□□□ -0.12
LMCD1-205ENST00000454244 UBR2Q8IWV8 1755 aa14.27□□□□□ -0.12
LMCD1-205ENST00000454244 MAPK8IP3Q9UPT6 1336 aa14.27□□□□□ -0.12
LMCD1-205ENST00000454244 A0A087WZG4 1122 aa14.27□□□□□ -0.13
LMCD1-205ENST00000454244 POLRMTO00411 1230 aaKnown RBP14.27□□□□□ -0.13
LMCD1-205ENST00000454244 A1BGP04217 495 aa14.27□□□□□ -0.13
LMCD1-205ENST00000454244 NFIXQ14938 502 aa14.27□□□□□ -0.13
LMCD1-205ENST00000454244 NFE2L2Q16236 605 aa14.27□□□□□ -0.13
LMCD1-205ENST00000454244 PNNQ9H307 717 aaKnown RBP14.27□□□□□ -0.13
LMCD1-205ENST00000454244 BCL2L12Q9HB09 334 aa14.27□□□□□ -0.13
LMCD1-205ENST00000454244 ZNF330Q9Y3S2 320 aaPredicted RBP14.27□□□□□ -0.13
LMCD1-205ENST00000454244 MYBBP1AQ9BQG0 1328 aaKnown RBP14.26□□□□□ -0.13
LMCD1-205ENST00000454244 PRAMEF22A3QJZ6 481 aa14.26□□□□□ -0.13
LMCD1-205ENST00000454244 TAF7Q15545 349 aaPredicted RBP14.26□□□□□ -0.13
LMCD1-205ENST00000454244 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
LMCD1-205ENST00000454244 USP16Q9Y5T5 823 aa14.26□□□□□ -0.13
LMCD1-205ENST00000454244 SIPA1L3O60292 1781 aaPredicted RBP14.25□□□□□ -0.13
LMCD1-205ENST00000454244 SNRPA1P09661 255 aaKnown RBP14.25□□□□□ -0.13
LMCD1-205ENST00000454244 IL6STP40189 918 aaPredicted RBP14.25□□□□□ -0.13
LMCD1-205ENST00000454244 THUMPD2Q9BTF0 503 aaKnown RBP14.25□□□□□ -0.13
LMCD1-205ENST00000454244 MIS18AQ9NYP9 233 aa14.25□□□□□ -0.13
LMCD1-205ENST00000454244 TBC1D2BQ9UPU7 963 aa14.25□□□□□ -0.13
LMCD1-205ENST00000454244 CHD4Q14839 1912 aa14.24□□□□□ -0.13
LMCD1-205ENST00000454244 PIP4K2AP48426 406 aaPredicted RBP14.24□□□□□ -0.13
LMCD1-205ENST00000454244 BICDL1Q6ZP65 573 aa14.24□□□□□ -0.13
LMCD1-205ENST00000454244 NPM2Q86SE8 214 aaKnown RBP14.24□□□□□ -0.13
LMCD1-205ENST00000454244 SERPINB2P05120 415 aa14.23□□□□□ -0.13
LMCD1-205ENST00000454244 KCNA3P22001 575 aa14.23□□□□□ -0.13
LMCD1-205ENST00000454244 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
LMCD1-205ENST00000454244 CHRNA5P30532 468 aa14.22□□□□□ -0.13
LMCD1-205ENST00000454244 TBC1D9BQ66K14 1250 aa14.22□□□□□ -0.13
LMCD1-205ENST00000454244 KIF13BQ9NQT8 1826 aa14.21□□□□□ -0.13
LMCD1-205ENST00000454244 CAMTA2O94983 1202 aa14.21□□□□□ -0.13
LMCD1-205ENST00000454244 ZEB1P37275 1124 aaPredicted RBP14.21□□□□□ -0.13
LMCD1-205ENST00000454244 DZIP3Q86Y13 1208 aaKnown RBP14.21□□□□□ -0.13
LMCD1-205ENST00000454244 PIM2Q9P1W9 311 aa14.21□□□□□ -0.13
LMCD1-205ENST00000454244 RIPK4P57078 832 aa14.2□□□□□ -0.14
LMCD1-205ENST00000454244 ARHGAP27Q6ZUM4 889 aa14.2□□□□□ -0.14
LMCD1-205ENST00000454244 PRKRIP1Q9H875 184 aaPredicted RBP14.2□□□□□ -0.14
LMCD1-205ENST00000454244 KIAA1551Q9HCM1 1747 aa14.2□□□□□ -0.14
LMCD1-205ENST00000454244 ATP10DQ9P241 1426 aa14.19□□□□□ -0.14
LMCD1-205ENST00000454244 NBPF26B4DH59 902 aa14.19□□□□□ -0.14
LMCD1-205ENST00000454244 TMPOP42166 694 aaKnown RBP14.19□□□□□ -0.14
LMCD1-205ENST00000454244 EIF4A1P60842 406 aaKnown RBP14.19□□□□□ -0.14
LMCD1-205ENST00000454244 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
LMCD1-205ENST00000454244 DALRD3Q5D0E6 543 aaKnown RBP14.19□□□□□ -0.14
LMCD1-205ENST00000454244 NBPF10Q6P3W6 841 aaKnown RBP14.19□□□□□ -0.14
LMCD1-205ENST00000454244 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
LMCD1-205ENST00000454244 NBPF15Q8N660 670 aa14.19□□□□□ -0.14
LMCD1-205ENST00000454244 N4BP2Q86UW6 1770 aaPredicted RBP14.19□□□□□ -0.14
LMCD1-205ENST00000454244 GIGYF1O75420 1035 aaPredicted RBP14.18□□□□□ -0.14
LMCD1-205ENST00000454244 RRP7AQ9Y3A4 280 aaKnown RBP14.18□□□□□ -0.14
LMCD1-205ENST00000454244 ADCY9O60503 1353 aa14.18□□□□□ -0.14
LMCD1-205ENST00000454244 CARMIL3Q8ND23 1372 aa14.18□□□□□ -0.14
LMCD1-205ENST00000454244 LMOD3Q0VAK6 560 aa14.17□□□□□ -0.14
LMCD1-205ENST00000454244 NEUROD2Q15784 382 aa14.17□□□□□ -0.14
LMCD1-205ENST00000454244 C2CD5Q86YS7 1000 aa14.17□□□□□ -0.14
LMCD1-205ENST00000454244 CCDC24Q8N4L8 307 aa14.17□□□□□ -0.14
LMCD1-205ENST00000454244 SETDB2Q96T68 719 aa14.17□□□□□ -0.14
LMCD1-205ENST00000454244 PRR5LQ6MZQ0 368 aa14.16□□□□□ -0.14
LMCD1-205ENST00000454244 ZNF526Q8TF50 670 aaPredicted RBP14.16□□□□□ -0.14
LMCD1-205ENST00000454244 RUNDC1Q96C34 613 aa14.16□□□□□ -0.14
LMCD1-205ENST00000454244 TSPYL4Q9UJ04 414 aa14.16□□□□□ -0.14
LMCD1-205ENST00000454244 ADAMTS8Q9UP79 889 aa14.16□□□□□ -0.14
LMCD1-205ENST00000454244 NPHP1O15259 732 aa14.15□□□□□ -0.14
LMCD1-205ENST00000454244 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
LMCD1-205ENST00000454244 ZNF652Q9Y2D9 606 aa14.15□□□□□ -0.14
LMCD1-205ENST00000454244 SCN7AQ01118 1682 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 DLG5Q8TDM6 1919 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 H0YIN7 160 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 C1QTNF8P60827 252 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 CLEC4GQ6UXB4 293 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 CNBD1Q8NA66 436 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 BRIP1Q9BX63 1249 aa14.14□□□□□ -0.15
LMCD1-205ENST00000454244 GPBP1L1Q9HC44 474 aaPredicted RBP14.14□□□□□ -0.15
LMCD1-205ENST00000454244 NRXN2Q9P2S2 1712 aa14.13□□□□□ -0.15
LMCD1-205ENST00000454244 TTLL6Q8N841 843 aa14.13□□□□□ -0.15
LMCD1-205ENST00000454244 MYL6BP14649 208 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 PDE6BP35913 854 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 ST5P78524 1137 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 HLFQ16534 295 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 C9orf131Q5VYM1 1079 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 NBPF5PQ86XG9 351 aaPredicted RBP14.12□□□□□ -0.15
LMCD1-205ENST00000454244 ZNF622Q969S3 477 aaKnown RBP eCLIP14.12□□□□□ -0.15
LMCD1-205ENST00000454244 BABAM1Q9NWV8 329 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 TRIM35Q9UPQ4 493 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 PDZRN3Q9UPQ7 1066 aa14.12□□□□□ -0.15
LMCD1-205ENST00000454244 NIP7Q9Y221 180 aaKnown RBP eCLIP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms