RNA–Protein interactions for RNA: ENST00000454001.1

RPSAP54-201, Transcript of ribosomal protein SA pseudogene 54, humanhuman

BASIC

Gene RPSAP54, Length 886 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP54-201ENST00000454001 AFDNP55196 1824 aaKnown RBP11.08□□□□□ -0.64
RPSAP54-201ENST00000454001 FCHSD2O94868 740 aa11.08□□□□□ -0.64
RPSAP54-201ENST00000454001 DDR1Q08345 913 aa11.08□□□□□ -0.64
RPSAP54-201ENST00000454001 RC3H1Q5TC82 1133 aaKnown RBP11.08□□□□□ -0.64
RPSAP54-201ENST00000454001 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
RPSAP54-201ENST00000454001 MRC1P22897 1456 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 TGFB2P61812 414 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 SLC39A6Q13433 755 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 DNAJC10Q8IXB1 793 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 LGR6Q9HBX8 967 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 KCPQ6ZWJ8 1503 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 RNF123Q5XPI4 1314 aa11.07□□□□□ -0.64
RPSAP54-201ENST00000454001 UBR2Q8IWV8 1755 aa11.06□□□□□ -0.64
RPSAP54-201ENST00000454001 CHRNA5P30532 468 aa11.06□□□□□ -0.64
RPSAP54-201ENST00000454001 AKAP4Q5JQC9 854 aa11.06□□□□□ -0.64
RPSAP54-201ENST00000454001 KIF3CO14782 793 aa11.05□□□□□ -0.64
RPSAP54-201ENST00000454001 HSPA6P17066 643 aa11.05□□□□□ -0.64
RPSAP54-201ENST00000454001 USPL1Q5W0Q7 1092 aa11.05□□□□□ -0.64
RPSAP54-201ENST00000454001 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
RPSAP54-201ENST00000454001 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
RPSAP54-201ENST00000454001 IRX6P78412 446 aaPredicted RBP11.04□□□□□ -0.64
RPSAP54-201ENST00000454001 MTHFSDQ2M296 383 aaKnown RBP11.04□□□□□ -0.64
RPSAP54-201ENST00000454001 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
RPSAP54-201ENST00000454001 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
RPSAP54-201ENST00000454001 COL15A1P39059 1388 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 RNMTO43148 476 aaKnown RBP11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 DIAPH1O60610 1272 aaKnown RBP11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 ZPR1O75312 459 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 KCNA3P22001 575 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 DALRD3Q5D0E6 543 aaKnown RBP11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 C9orf131Q5VYM1 1079 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 ADAMTS8Q9UP79 889 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 SBF1O95248 1867 aa11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 SIPA1L3O60292 1781 aaPredicted RBP11.03□□□□□ -0.64
RPSAP54-201ENST00000454001 CACNA1SQ13698 1873 aa11.02□□□□□ -0.64
RPSAP54-201ENST00000454001 SCN7AQ01118 1682 aa11.02□□□□□ -0.64
RPSAP54-201ENST00000454001 TIAM2Q8IVF5 1701 aa11.02□□□□□ -0.65
RPSAP54-201ENST00000454001 POLRMTO00411 1230 aaKnown RBP11.02□□□□□ -0.65
RPSAP54-201ENST00000454001 U2SURPO15042 1029 aaKnown RBP11.02□□□□□ -0.65
RPSAP54-201ENST00000454001 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
RPSAP54-201ENST00000454001 PIM2Q9P1W9 311 aa11.02□□□□□ -0.65
RPSAP54-201ENST00000454001 WDR90Q96KV7 1748 aa11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 CANXP27824 592 aaKnown RBP11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 BICDL1Q6ZP65 573 aa11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 RNF181Q9P0P0 153 aa11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 ZNF330Q9Y3S2 320 aaPredicted RBP11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 COL11A2P13942 1736 aaPredicted RBP11.01□□□□□ -0.65
RPSAP54-201ENST00000454001 PCNTO95613 3336 aa11□□□□□ -0.65
RPSAP54-201ENST00000454001 RASSF7Q02833 373 aa11□□□□□ -0.65
RPSAP54-201ENST00000454001 NFIXQ14938 502 aa11□□□□□ -0.65
RPSAP54-201ENST00000454001 TTC5Q8N0Z6 440 aa11□□□□□ -0.65
RPSAP54-201ENST00000454001 PPP4R2Q9NY27 417 aa11□□□□□ -0.65
RPSAP54-201ENST00000454001 ANKRD31Q8N7Z5 1873 aa11□□□□□ -0.65
RPSAP54-201ENST00000454001 TM4SF1P30408 202 aa10.99□□□□□ -0.65
RPSAP54-201ENST00000454001 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
RPSAP54-201ENST00000454001 TOMM70O94826 608 aa10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 HTRA3P83110 453 aa10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 C16orf71Q8IYS4 520 aaPredicted RBP10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 CCDC24Q8N4L8 307 aa10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 NARFQ9UHQ1 456 aa10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
RPSAP54-201ENST00000454001 SERPINB2P05120 415 aa10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 TEFQ10587 303 aa10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 C2CD5Q86YS7 1000 aa10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 CDCA7LQ96GN5 454 aa10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 ZNF496Q96IT1 587 aaPredicted RBP10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 ZNF219Q9P2Y4 722 aaPredicted RBP10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 BCORQ6W2J9 1755 aa10.97□□□□□ -0.65
RPSAP54-201ENST00000454001 KDM2BQ8NHM5 1336 aa10.96□□□□□ -0.65
RPSAP54-201ENST00000454001 STARD3NLO95772 234 aa10.96□□□□□ -0.65
RPSAP54-201ENST00000454001 APLP1P51693 650 aa10.96□□□□□ -0.65
RPSAP54-201ENST00000454001 IFFO2Q5TF58 517 aa10.96□□□□□ -0.65
RPSAP54-201ENST00000454001 RCAN3Q9UKA8 241 aa10.96□□□□□ -0.65
RPSAP54-201ENST00000454001 HEG1Q9ULI3 1381 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 GNAT3A8MTJ3 354 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 PIP4K2AP48426 406 aaPredicted RBP10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 PRELPP51888 382 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 RRP1P56182 461 aaKnown RBP10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 TBC1D9BQ66K14 1250 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 IL17REQ8NFR9 667 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 GAS2L2Q8NHY3 880 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 RRAGCQ9HB90 399 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
RPSAP54-201ENST00000454001 KCNQ3O43525 872 aa10.94□□□□□ -0.66
RPSAP54-201ENST00000454001 PRKAR2BP31323 418 aa10.94□□□□□ -0.66
RPSAP54-201ENST00000454001 ZNF790Q6PG37 636 aa10.94□□□□□ -0.66
RPSAP54-201ENST00000454001 NGEFQ8N5V2 710 aa10.94□□□□□ -0.66
RPSAP54-201ENST00000454001 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
RPSAP54-201ENST00000454001 H0YIN7 160 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms