RNA–Protein interactions for RNA: ENST00000451734.1

NIFK-204, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 3

Gene NIFK, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-204ENST00000451734 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
NIFK-204ENST00000451734 ZPR1O75312 459 aa22.96■■□□□ 1.27
NIFK-204ENST00000451734 TAF7Q15545 349 aaPredicted RBP22.96■■□□□ 1.27
NIFK-204ENST00000451734 MAPK8IP3Q9UPT6 1336 aa22.96■■□□□ 1.27
NIFK-204ENST00000451734 COL15A1P39059 1388 aa22.95■■□□□ 1.26
NIFK-204ENST00000451734 EIF5P55010 431 aaKnown RBP22.95■■□□□ 1.26
NIFK-204ENST00000451734 VIRMAQ69YN4 1812 aaKnown RBP22.95■■□□□ 1.26
NIFK-204ENST00000451734 UBR2Q8IWV8 1755 aa22.95■■□□□ 1.26
NIFK-204ENST00000451734 MIS18AQ9NYP9 233 aa22.95■■□□□ 1.26
NIFK-204ENST00000451734 NARFQ9UHQ1 456 aa22.95■■□□□ 1.26
NIFK-204ENST00000451734 PARP3Q9Y6F1 533 aa22.95■■□□□ 1.26
NIFK-204ENST00000451734 UTRNP46939 3433 aa22.95■■□□□ 1.26
NIFK-204ENST00000451734 DDR1Q08345 913 aa22.94■■□□□ 1.26
NIFK-204ENST00000451734 THUMPD2Q9BTF0 503 aaKnown RBP22.94■■□□□ 1.26
NIFK-204ENST00000451734 SIPA1L3O60292 1781 aaPredicted RBP22.94■■□□□ 1.26
NIFK-204ENST00000451734 PRAMEF22A3QJZ6 481 aa22.93■■□□□ 1.26
NIFK-204ENST00000451734 A1BGP04217 495 aa22.93■■□□□ 1.26
NIFK-204ENST00000451734 TM4SF1P30408 202 aa22.93■■□□□ 1.26
NIFK-204ENST00000451734 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
NIFK-204ENST00000451734 USP16Q9Y5T5 823 aa22.93■■□□□ 1.26
NIFK-204ENST00000451734 WWC3Q9ULE0 1092 aa22.92■■□□□ 1.26
NIFK-204ENST00000451734 GRIN3BO60391 1043 aa22.91■■□□□ 1.26
NIFK-204ENST00000451734 SNRPA1P09661 255 aaKnown RBP22.91■■□□□ 1.26
NIFK-204ENST00000451734 C4AP0C0L4 1744 aa22.91■■□□□ 1.26
NIFK-204ENST00000451734 C10orf71Q711Q0 1435 aa22.91■■□□□ 1.26
NIFK-204ENST00000451734 A0A087WZG4 1122 aa22.89■■□□□ 1.25
NIFK-204ENST00000451734 POLRMTO00411 1230 aaKnown RBP22.89■■□□□ 1.25
NIFK-204ENST00000451734 IL6STP40189 918 aaPredicted RBP22.89■■□□□ 1.25
NIFK-204ENST00000451734 RIPK4P57078 832 aa22.89■■□□□ 1.25
NIFK-204ENST00000451734 TGFB2P61812 414 aa22.89■■□□□ 1.25
NIFK-204ENST00000451734 NFIXQ14938 502 aa22.89■■□□□ 1.25
NIFK-204ENST00000451734 CCDC146Q8IYE0 955 aa22.89■■□□□ 1.25
NIFK-204ENST00000451734 ZNF330Q9Y3S2 320 aaPredicted RBP22.89■■□□□ 1.25
NIFK-204ENST00000451734 A0A0G2JLW4 131 aa22.88■■□□□ 1.25
NIFK-204ENST00000451734 TMPOP42166 694 aaKnown RBP22.88■■□□□ 1.25
NIFK-204ENST00000451734 PNISRQ8TF01 805 aaKnown RBP22.88■■□□□ 1.25
NIFK-204ENST00000451734 TBC1D2BQ9UPU7 963 aa22.88■■□□□ 1.25
NIFK-204ENST00000451734 PXDNLA1KZ92 1463 aa22.87■■□□□ 1.25
NIFK-204ENST00000451734 PIP4K2AP48426 406 aaPredicted RBP22.87■■□□□ 1.25
NIFK-204ENST00000451734 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
NIFK-204ENST00000451734 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
NIFK-204ENST00000451734 GOLGB1Q14789 3259 aaKnown RBP22.87■■□□□ 1.25
NIFK-204ENST00000451734 DPEP1P16444 411 aa22.86■■□□□ 1.25
NIFK-204ENST00000451734 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
NIFK-204ENST00000451734 ZNF316A6NFI3 1004 aaPredicted RBP22.85■■□□□ 1.25
NIFK-204ENST00000451734 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
NIFK-204ENST00000451734 RUNDC1Q96C34 613 aa22.84■■□□□ 1.25
NIFK-204ENST00000451734 NBPF26B4DH59 902 aa22.83■■□□□ 1.25
NIFK-204ENST00000451734 NBPF10Q6P3W6 841 aaKnown RBP22.83■■□□□ 1.25
NIFK-204ENST00000451734 BICDL1Q6ZP65 573 aa22.83■■□□□ 1.25
NIFK-204ENST00000451734 NBPF15Q8N660 670 aa22.83■■□□□ 1.25
NIFK-204ENST00000451734 ZNF784Q8NCA9 323 aaPredicted RBP22.83■■□□□ 1.25
NIFK-204ENST00000451734 GIGYF1O75420 1035 aaPredicted RBP22.82■■□□□ 1.24
NIFK-204ENST00000451734 CAMTA2O94983 1202 aa22.82■■□□□ 1.24
NIFK-204ENST00000451734 SERPINB2P05120 415 aa22.82■■□□□ 1.24
NIFK-204ENST00000451734 KCNA3P22001 575 aa22.82■■□□□ 1.24
NIFK-204ENST00000451734 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
NIFK-204ENST00000451734 TBC1D9BQ66K14 1250 aa22.82■■□□□ 1.24
NIFK-204ENST00000451734 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
NIFK-204ENST00000451734 LMOD3Q0VAK6 560 aa22.8■■□□□ 1.24
NIFK-204ENST00000451734 DZIP3Q86Y13 1208 aaKnown RBP22.8■■□□□ 1.24
NIFK-204ENST00000451734 TSPYL4Q9UJ04 414 aa22.79■■□□□ 1.24
NIFK-204ENST00000451734 TRIM35Q9UPQ4 493 aa22.79■■□□□ 1.24
NIFK-204ENST00000451734 BCS1LQ9Y276 419 aa22.79■■□□□ 1.24
NIFK-204ENST00000451734 CHRNA5P30532 468 aa22.78■■□□□ 1.24
NIFK-204ENST00000451734 DLG5Q8TDM6 1919 aa22.78■■□□□ 1.24
NIFK-204ENST00000451734 KIF13BQ9NQT8 1826 aa22.78■■□□□ 1.24
NIFK-204ENST00000451734 CCDC184Q52MB2 194 aa22.77■■□□□ 1.24
NIFK-204ENST00000451734 BABAM1Q9NWV8 329 aa22.76■■□□□ 1.23
NIFK-204ENST00000451734 PIM2Q9P1W9 311 aa22.76■■□□□ 1.23
NIFK-204ENST00000451734 KIAA1551Q9HCM1 1747 aa22.76■■□□□ 1.23
NIFK-204ENST00000451734 CLEC4GQ6UXB4 293 aa22.73■■□□□ 1.23
NIFK-204ENST00000451734 SETDB2Q96T68 719 aa22.73■■□□□ 1.23
NIFK-204ENST00000451734 CARMIL3Q8ND23 1372 aa22.73■■□□□ 1.23
NIFK-204ENST00000451734 KDM3BQ7LBC6 1761 aa22.72■■□□□ 1.23
NIFK-204ENST00000451734 CHL1O00533 1208 aa22.72■■□□□ 1.23
NIFK-204ENST00000451734 DALRD3Q5D0E6 543 aaKnown RBP22.72■■□□□ 1.23
NIFK-204ENST00000451734 PRR5LQ6MZQ0 368 aa22.72■■□□□ 1.23
NIFK-204ENST00000451734 CCDC24Q8N4L8 307 aa22.72■■□□□ 1.23
NIFK-204ENST00000451734 NGEFQ8N5V2 710 aa22.72■■□□□ 1.23
NIFK-204ENST00000451734 CHD4Q14839 1912 aa22.72■■□□□ 1.23
NIFK-204ENST00000451734 N4BP2Q86UW6 1770 aaPredicted RBP22.71■■□□□ 1.23
NIFK-204ENST00000451734 APAF1O14727 1248 aa22.71■■□□□ 1.23
NIFK-204ENST00000451734 HLFQ16534 295 aa22.7■■□□□ 1.22
NIFK-204ENST00000451734 ARHGAP27Q6ZUM4 889 aa22.7■■□□□ 1.22
NIFK-204ENST00000451734 C2CD5Q86YS7 1000 aa22.7■■□□□ 1.22
NIFK-204ENST00000451734 ZNF652Q9Y2D9 606 aa22.7■■□□□ 1.22
NIFK-204ENST00000451734 LAS1LQ9Y4W2 734 aaKnown RBP22.7■■□□□ 1.22
NIFK-204ENST00000451734 SCN7AQ01118 1682 aa22.69■■□□□ 1.22
NIFK-204ENST00000451734 MYL6BP14649 208 aa22.69■■□□□ 1.22
NIFK-204ENST00000451734 NRXN2Q9P2S2 1712 aa22.68■■□□□ 1.22
NIFK-204ENST00000451734 RGL2O15211 777 aa22.68■■□□□ 1.22
NIFK-204ENST00000451734 EIF2S2P20042 333 aaKnown RBP22.68■■□□□ 1.22
NIFK-204ENST00000451734 TTLL7Q6ZT98 887 aa22.68■■□□□ 1.22
NIFK-204ENST00000451734 CNBD1Q8NA66 436 aa22.68■■□□□ 1.22
NIFK-204ENST00000451734 BRIP1Q9BX63 1249 aa22.68■■□□□ 1.22
NIFK-204ENST00000451734 ANP32CO43423 234 aa22.67■■□□□ 1.22
NIFK-204ENST00000451734 PDIA6Q15084 440 aa22.67■■□□□ 1.22
NIFK-204ENST00000451734 KRT24Q2M2I5 525 aa22.67■■□□□ 1.22
NIFK-204ENST00000451734 ERBB4Q15303 1308 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms