RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 WWC3Q9ULE0 1092 aa18.29■□□□□ 0.52
SMARCD2-204ENST00000450364 COL15A1P39059 1388 aa18.29■□□□□ 0.52
SMARCD2-204ENST00000450364 USPL1Q5W0Q7 1092 aa18.28■□□□□ 0.52
SMARCD2-204ENST00000450364 BRCA1P38398 1863 aaKnown RBP18.28■□□□□ 0.52
SMARCD2-204ENST00000450364 PRAMEF22A3QJZ6 481 aa18.27■□□□□ 0.52
SMARCD2-204ENST00000450364 TM4SF1P30408 202 aa18.27■□□□□ 0.52
SMARCD2-204ENST00000450364 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
SMARCD2-204ENST00000450364 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-204ENST00000450364 NRXN2Q9P2S2 1712 aa18.26■□□□□ 0.51
SMARCD2-204ENST00000450364 AFDNP55196 1824 aaKnown RBP18.26■□□□□ 0.51
SMARCD2-204ENST00000450364 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
SMARCD2-204ENST00000450364 EIF5P55010 431 aaKnown RBP18.26■□□□□ 0.51
SMARCD2-204ENST00000450364 RALBP1Q15311 655 aa18.26■□□□□ 0.51
SMARCD2-204ENST00000450364 SCN7AQ01118 1682 aa18.25■□□□□ 0.51
SMARCD2-204ENST00000450364 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
SMARCD2-204ENST00000450364 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
SMARCD2-204ENST00000450364 CANXP27824 592 aaKnown RBP18.25■□□□□ 0.51
SMARCD2-204ENST00000450364 NARFQ9UHQ1 456 aa18.25■□□□□ 0.51
SMARCD2-204ENST00000450364 HTATSF1O43719 755 aaKnown RBP18.24■□□□□ 0.51
SMARCD2-204ENST00000450364 KCNA3P22001 575 aa18.24■□□□□ 0.51
SMARCD2-204ENST00000450364 FMNL2Q96PY5 1086 aa18.24■□□□□ 0.51
SMARCD2-204ENST00000450364 A0A0G2JLW4 131 aa18.23■□□□□ 0.51
SMARCD2-204ENST00000450364 A1BGP04217 495 aa18.23■□□□□ 0.51
SMARCD2-204ENST00000450364 USP16Q9Y5T5 823 aa18.23■□□□□ 0.51
SMARCD2-204ENST00000450364 PARP3Q9Y6F1 533 aa18.23■□□□□ 0.51
SMARCD2-204ENST00000450364 NFIXQ14938 502 aa18.22■□□□□ 0.51
SMARCD2-204ENST00000450364 THUMPD2Q9BTF0 503 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-204ENST00000450364 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
SMARCD2-204ENST00000450364 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
SMARCD2-204ENST00000450364 MYBBP1AQ9BQG0 1328 aaKnown RBP18.22■□□□□ 0.51
SMARCD2-204ENST00000450364 GRIN3BO60391 1043 aa18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 ZPR1O75312 459 aa18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 STARD3NLO95772 234 aa18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 DPEP1P16444 411 aa18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 PIP4K2AP48426 406 aaPredicted RBP18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 TGFB2P61812 414 aa18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-204ENST00000450364 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
SMARCD2-204ENST00000450364 TEX13AQ9BXU3 409 aaPredicted RBP18.19■□□□□ 0.5
SMARCD2-204ENST00000450364 ADCY9O60503 1353 aa18.18■□□□□ 0.5
SMARCD2-204ENST00000450364 CARMIL3Q8ND23 1372 aa18.18■□□□□ 0.5
SMARCD2-204ENST00000450364 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
SMARCD2-204ENST00000450364 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
SMARCD2-204ENST00000450364 TBC1D2BQ9UPU7 963 aa18.18■□□□□ 0.5
SMARCD2-204ENST00000450364 NBPF26B4DH59 902 aa18.17■□□□□ 0.5
SMARCD2-204ENST00000450364 TBC1D9BQ66K14 1250 aa18.17■□□□□ 0.5
SMARCD2-204ENST00000450364 NBPF10Q6P3W6 841 aaKnown RBP18.17■□□□□ 0.5
SMARCD2-204ENST00000450364 NBPF15Q8N660 670 aa18.17■□□□□ 0.5
SMARCD2-204ENST00000450364 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
SMARCD2-204ENST00000450364 ANKRD31Q8N7Z5 1873 aa18.17■□□□□ 0.5
SMARCD2-204ENST00000450364 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
SMARCD2-204ENST00000450364 CAMTA2O94983 1202 aa18.16■□□□□ 0.5
SMARCD2-204ENST00000450364 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
SMARCD2-204ENST00000450364 CHRNA5P30532 468 aa18.16■□□□□ 0.5
SMARCD2-204ENST00000450364 DLEC1Q9Y238 1755 aa18.16■□□□□ 0.5
SMARCD2-204ENST00000450364 SERPINB2P05120 415 aa18.14■□□□□ 0.49
SMARCD2-204ENST00000450364 CCDC146Q8IYE0 955 aa18.14■□□□□ 0.49
SMARCD2-204ENST00000450364 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
SMARCD2-204ENST00000450364 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
SMARCD2-204ENST00000450364 COL11A2P13942 1736 aaPredicted RBP18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 A0A087WZG4 1122 aa18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 TMPOP42166 694 aaKnown RBP18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 BICDL1Q6ZP65 573 aa18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
SMARCD2-204ENST00000450364 RRP7AQ9Y3A4 280 aaKnown RBP18.12■□□□□ 0.49
SMARCD2-204ENST00000450364 GIGYF1O75420 1035 aaPredicted RBP18.11■□□□□ 0.49
SMARCD2-204ENST00000450364 RIPK4P57078 832 aa18.11■□□□□ 0.49
SMARCD2-204ENST00000450364 DZIP3Q86Y13 1208 aaKnown RBP18.11■□□□□ 0.49
SMARCD2-204ENST00000450364 ADAMTS8Q9UP79 889 aa18.11■□□□□ 0.49
SMARCD2-204ENST00000450364 NEFMP07197 916 aa18.1■□□□□ 0.49
SMARCD2-204ENST00000450364 CCDC24Q8N4L8 307 aa18.1■□□□□ 0.49
SMARCD2-204ENST00000450364 PNNQ9H307 717 aaKnown RBP18.1■□□□□ 0.49
SMARCD2-204ENST00000450364 TRIM35Q9UPQ4 493 aa18.1■□□□□ 0.49
SMARCD2-204ENST00000450364 PRR5LQ6MZQ0 368 aa18.09■□□□□ 0.49
SMARCD2-204ENST00000450364 PNISRQ8TF01 805 aaKnown RBP18.09■□□□□ 0.49
SMARCD2-204ENST00000450364 PIM2Q9P1W9 311 aa18.09■□□□□ 0.49
SMARCD2-204ENST00000450364 CCDC184Q52MB2 194 aa18.08■□□□□ 0.48
SMARCD2-204ENST00000450364 HLFQ16534 295 aa18.06■□□□□ 0.48
SMARCD2-204ENST00000450364 DALRD3Q5D0E6 543 aaKnown RBP18.06■□□□□ 0.48
SMARCD2-204ENST00000450364 ARHGAP27Q6ZUM4 889 aa18.06■□□□□ 0.48
SMARCD2-204ENST00000450364 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
SMARCD2-204ENST00000450364 SBF1O95248 1867 aa18.05■□□□□ 0.48
SMARCD2-204ENST00000450364 PRELPP51888 382 aa18.05■□□□□ 0.48
SMARCD2-204ENST00000450364 NEUROD2Q15784 382 aa18.05■□□□□ 0.48
SMARCD2-204ENST00000450364 LRP10Q7Z4F1 713 aa18.05■□□□□ 0.48
SMARCD2-204ENST00000450364 ZEB1P37275 1124 aaPredicted RBP18.04■□□□□ 0.48
SMARCD2-204ENST00000450364 WDR43Q15061 677 aaKnown RBP eCLIP18.04■□□□□ 0.48
SMARCD2-204ENST00000450364 TTLL7Q6ZT98 887 aa18.04■□□□□ 0.48
SMARCD2-204ENST00000450364 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
SMARCD2-204ENST00000450364 TSPYL4Q9UJ04 414 aa18.04■□□□□ 0.48
SMARCD2-204ENST00000450364 NUP98P52948 1817 aa18.04■□□□□ 0.48
SMARCD2-204ENST00000450364 PDIA6Q15084 440 aa18.03■□□□□ 0.48
SMARCD2-204ENST00000450364 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
SMARCD2-204ENST00000450364 CLEC4GQ6UXB4 293 aa18.03■□□□□ 0.48
SMARCD2-204ENST00000450364 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
SMARCD2-204ENST00000450364 PROSER3Q2NL68 480 aa18.02■□□□□ 0.48
SMARCD2-204ENST00000450364 ZNF526Q8TF50 670 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms