RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 STXBP4Q6ZWJ1 553 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 OTUD6BQ8N6M0 293 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 PTCD1O75127 700 aaKnown RBP12.55□□□□□ -0.4
SCN5A-208ENST00000450102 YEATS4O95619 227 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 NOP2P46087 812 aaKnown RBP12.55□□□□□ -0.4
SCN5A-208ENST00000450102 MAP3K12Q12852 859 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 ATF7IPQ6VMQ6 1270 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 SREK1Q8WXA9 508 aaKnown RBP12.55□□□□□ -0.4
SCN5A-208ENST00000450102 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 NAA15Q9BXJ9 866 aaKnown RBP12.55□□□□□ -0.4
SCN5A-208ENST00000450102 SLC12A7Q9Y666 1083 aa12.55□□□□□ -0.4
SCN5A-208ENST00000450102 ZC3H6P61129 1189 aaKnown RBP12.54□□□□□ -0.4
SCN5A-208ENST00000450102 CHD1LQ86WJ1 897 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 ANO10Q9NW15 660 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 FERMT3Q86UX7 667 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 CALML4Q96GE6 196 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 A0A087WZG4 1122 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 SSRP1Q08945 709 aaKnown RBP12.54□□□□□ -0.4
SCN5A-208ENST00000450102 UTP14AQ9BVJ6 771 aaKnown RBP12.54□□□□□ -0.4
SCN5A-208ENST00000450102 NDC80O14777 642 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 APBB1IPQ7Z5R6 666 aaPredicted RBP12.54□□□□□ -0.4
SCN5A-208ENST00000450102 CCDC83Q8IWF9 413 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 PDCL2Q8N4E4 241 aa12.54□□□□□ -0.4
SCN5A-208ENST00000450102 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 CDCA7LQ96GN5 454 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 C8orf76Q96K31 380 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 KIF2AO00139 706 aaPredicted RBP12.53□□□□□ -0.4
SCN5A-208ENST00000450102 PDIA4P13667 645 aaKnown RBP12.53□□□□□ -0.4
SCN5A-208ENST00000450102 SLC5A1P13866 664 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 CCDC174Q6PII3 467 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 VAT1LQ9HCJ6 419 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 CABP5Q9NP86 173 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 CABP1Q9NZU7 370 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 PPP2R1AP30153 589 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 TIGD1Q96MW7 591 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 MMRN2Q9H8L6 949 aa12.53□□□□□ -0.4
SCN5A-208ENST00000450102 SPECC1LQ69YQ0 1117 aa12.52□□□□□ -0.4
SCN5A-208ENST00000450102 IDEP14735 1019 aa12.52□□□□□ -0.4
SCN5A-208ENST00000450102 AMPD3Q01432 767 aa12.52□□□□□ -0.4
SCN5A-208ENST00000450102 PDE3AQ14432 1141 aa12.52□□□□□ -0.41
SCN5A-208ENST00000450102 MAATS1Q7Z4T9 603 aa12.52□□□□□ -0.41
SCN5A-208ENST00000450102 CATIPQ7Z7H3 387 aa12.52□□□□□ -0.41
SCN5A-208ENST00000450102 CKAP2LQ8IYA6 745 aa12.52□□□□□ -0.41
SCN5A-208ENST00000450102 CNNM3Q8NE01 707 aa12.52□□□□□ -0.41
SCN5A-208ENST00000450102 ZNF213O14771 459 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 SLU7O95391 586 aaKnown RBP12.51□□□□□ -0.41
SCN5A-208ENST00000450102 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 FBF1Q8TES7 1133 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 A0A1W2PRG0 241 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 STX6O43752 255 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 MYD88Q99836 296 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 TCP11L1Q9NUJ3 509 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 IFIT3O14879 490 aaKnown RBP12.51□□□□□ -0.41
SCN5A-208ENST00000450102 PRPF40BQ6NWY9 871 aaKnown RBP12.51□□□□□ -0.41
SCN5A-208ENST00000450102 KIF18AQ8NI77 898 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 RNF41Q9H4P4 317 aaPredicted RBP12.51□□□□□ -0.41
SCN5A-208ENST00000450102 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 GOLGA8BA8MQT2 603 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 IFIT5Q13325 482 aaKnown RBP12.51□□□□□ -0.41
SCN5A-208ENST00000450102 MXRA7P84157 204 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 CCDC12Q8WUD4 166 aaPredicted RBP12.51□□□□□ -0.41
SCN5A-208ENST00000450102 BOLA2Q9H3K6 86 aa12.51□□□□□ -0.41
SCN5A-208ENST00000450102 CCDC7Q96M83 1385 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 SH3BP5O60239 455 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 CBX1P83916 185 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 SYCE3A1L190 88 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
SCN5A-208ENST00000450102 TRMT112Q9UI30 125 aaKnown RBP12.5□□□□□ -0.41
SCN5A-208ENST00000450102 BRD4O60885 1362 aaPredicted RBP12.5□□□□□ -0.41
SCN5A-208ENST00000450102 POLR3GO15318 223 aaPredicted RBP12.5□□□□□ -0.41
SCN5A-208ENST00000450102 MYO1BO43795 1136 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 GNAT3A8MTJ3 354 aa12.5□□□□□ -0.41
SCN5A-208ENST00000450102 RRS1Q15050 365 aaKnown RBP12.5□□□□□ -0.41
SCN5A-208ENST00000450102 IQCGQ9H095 443 aaKnown RBP12.5□□□□□ -0.41
SCN5A-208ENST00000450102 PSMC4P43686 418 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 CTR9Q6PD62 1173 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 KIF1BPQ96EK5 621 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 SMARCC1Q92922 1105 aaPredicted RBP12.49□□□□□ -0.41
SCN5A-208ENST00000450102 PHACTR2O75167 634 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 HLA-DOAP06340 250 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 FAM114A1Q8IWE2 563 aa12.49□□□□□ -0.41
SCN5A-208ENST00000450102 KIAA0753Q2KHM9 967 aa12.48□□□□□ -0.41
SCN5A-208ENST00000450102 MVPQ14764 893 aaKnown RBP12.48□□□□□ -0.41
SCN5A-208ENST00000450102 SLC4A8Q2Y0W8 1093 aa12.48□□□□□ -0.41
SCN5A-208ENST00000450102 MPRIPQ6WCQ1 1025 aa12.48□□□□□ -0.41
SCN5A-208ENST00000450102 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
SCN5A-208ENST00000450102 PAIP2Q9BPZ3 127 aaKnown RBP12.48□□□□□ -0.41
SCN5A-208ENST00000450102 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
SCN5A-208ENST00000450102 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms