RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 DCTN1Q14203 1278 aa20.93■□□□□ 0.94
HDLBP-223ENST00000449864 SOS1Q07889 1333 aaPredicted RBP20.93■□□□□ 0.94
HDLBP-223ENST00000449864 USP42Q9H9J4 1324 aaKnown RBP20.93■□□□□ 0.94
HDLBP-223ENST00000449864 COL15A1P39059 1388 aa20.93■□□□□ 0.94
HDLBP-223ENST00000449864 YY1P25490 414 aa20.92■□□□□ 0.94
HDLBP-223ENST00000449864 PLEKHF1Q96S99 279 aa20.92■□□□□ 0.94
HDLBP-223ENST00000449864 SRP68Q9UHB9 627 aaKnown RBP20.92■□□□□ 0.94
HDLBP-223ENST00000449864 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
HDLBP-223ENST00000449864 NFE2L2Q16236 605 aa20.91■□□□□ 0.94
HDLBP-223ENST00000449864 BCORQ6W2J9 1755 aa20.91■□□□□ 0.94
HDLBP-223ENST00000449864 TEX13AQ9BXU3 409 aaPredicted RBP20.91■□□□□ 0.94
HDLBP-223ENST00000449864 ZPR1O75312 459 aa20.9■□□□□ 0.94
HDLBP-223ENST00000449864 CANXP27824 592 aaKnown RBP20.9■□□□□ 0.94
HDLBP-223ENST00000449864 BRCA1P38398 1863 aaKnown RBP20.9■□□□□ 0.94
HDLBP-223ENST00000449864 WDR43Q15061 677 aaKnown RBP eCLIP20.89■□□□□ 0.93
HDLBP-223ENST00000449864 PARP3Q9Y6F1 533 aa20.89■□□□□ 0.93
HDLBP-223ENST00000449864 KCNQ3O43525 872 aa20.88■□□□□ 0.93
HDLBP-223ENST00000449864 PRKRIP1Q9H875 184 aaPredicted RBP20.88■□□□□ 0.93
HDLBP-223ENST00000449864 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
HDLBP-223ENST00000449864 USPL1Q5W0Q7 1092 aa20.87■□□□□ 0.93
HDLBP-223ENST00000449864 ZNF330Q9Y3S2 320 aaPredicted RBP20.87■□□□□ 0.93
HDLBP-223ENST00000449864 FKBP8Q14318 412 aa20.86■□□□□ 0.93
HDLBP-223ENST00000449864 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
HDLBP-223ENST00000449864 NRXN2Q9P2S2 1712 aa20.86■□□□□ 0.93
HDLBP-223ENST00000449864 NPM2Q86SE8 214 aaKnown RBP20.85■□□□□ 0.93
HDLBP-223ENST00000449864 NARFQ9UHQ1 456 aa20.85■□□□□ 0.93
HDLBP-223ENST00000449864 PXDNLA1KZ92 1463 aa20.84■□□□□ 0.93
HDLBP-223ENST00000449864 A0A087WZG4 1122 aa20.84■□□□□ 0.93
HDLBP-223ENST00000449864 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.935e-12■■■■■ 43.2
HDLBP-223ENST00000449864 ARFGEF1Q9Y6D6 1849 aa20.83■□□□□ 0.93
HDLBP-223ENST00000449864 SNRPA1P09661 255 aaKnown RBP20.83■□□□□ 0.93
HDLBP-223ENST00000449864 PNISRQ8TF01 805 aaKnown RBP20.83■□□□□ 0.93
HDLBP-223ENST00000449864 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.93
HDLBP-223ENST00000449864 DLEC1Q9Y238 1755 aa20.82■□□□□ 0.92
HDLBP-223ENST00000449864 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
HDLBP-223ENST00000449864 EIF5P55010 431 aaKnown RBP20.82■□□□□ 0.92
HDLBP-223ENST00000449864 CCDC146Q8IYE0 955 aa20.82■□□□□ 0.92
HDLBP-223ENST00000449864 WWC3Q9ULE0 1092 aa20.82■□□□□ 0.92
HDLBP-223ENST00000449864 ZNF316A6NFI3 1004 aaPredicted RBP20.81■□□□□ 0.92
HDLBP-223ENST00000449864 A1BGP04217 495 aa20.81■□□□□ 0.92
HDLBP-223ENST00000449864 IL6STP40189 918 aaPredicted RBP20.81■□□□□ 0.92
HDLBP-223ENST00000449864 RIPK4P57078 832 aa20.81■□□□□ 0.92
HDLBP-223ENST00000449864 DDR1Q08345 913 aa20.81■□□□□ 0.92
HDLBP-223ENST00000449864 LMOD3Q0VAK6 560 aa20.81■□□□□ 0.92
HDLBP-223ENST00000449864 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
HDLBP-223ENST00000449864 USP16Q9Y5T5 823 aa20.8■□□□□ 0.92
HDLBP-223ENST00000449864 PRAMEF22A3QJZ6 481 aa20.79■□□□□ 0.92
HDLBP-223ENST00000449864 POLRMTO00411 1230 aaKnown RBP20.79■□□□□ 0.92
HDLBP-223ENST00000449864 TMPOP42166 694 aaKnown RBP20.79■□□□□ 0.92
HDLBP-223ENST00000449864 TGFB2P61812 414 aa20.79■□□□□ 0.92
HDLBP-223ENST00000449864 RUNDC1Q96C34 613 aa20.79■□□□□ 0.92
HDLBP-223ENST00000449864 ANKRD31Q8N7Z5 1873 aa20.78■□□□□ 0.92
HDLBP-223ENST00000449864 RRP7AQ9Y3A4 280 aaKnown RBP20.78■□□□□ 0.92
HDLBP-223ENST00000449864 GOLGB1Q14789 3259 aaKnown RBP20.77■□□□□ 0.92
HDLBP-223ENST00000449864 TM4SF1P30408 202 aa20.77■□□□□ 0.92
HDLBP-223ENST00000449864 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.92
HDLBP-223ENST00000449864 NFIXQ14938 502 aa20.77■□□□□ 0.92
HDLBP-223ENST00000449864 NEUROD2Q15784 382 aa20.77■□□□□ 0.92
HDLBP-223ENST00000449864 BCL2L12Q9HB09 334 aa20.77■□□□□ 0.92
HDLBP-223ENST00000449864 TBC1D2BQ9UPU7 963 aa20.77■□□□□ 0.92
HDLBP-223ENST00000449864 CACNA1SQ13698 1873 aa20.77■□□□□ 0.92
HDLBP-223ENST00000449864 NUP98P52948 1817 aa20.76■□□□□ 0.91
HDLBP-223ENST00000449864 A0A0G2JLW4 131 aa20.76■□□□□ 0.91
HDLBP-223ENST00000449864 ADAMTS8Q9UP79 889 aa20.76■□□□□ 0.91
HDLBP-223ENST00000449864 UTRNP46939 3433 aa20.75■□□□□ 0.91
HDLBP-223ENST00000449864 BICDL1Q6ZP65 573 aa20.75■□□□□ 0.91
HDLBP-223ENST00000449864 DZIP3Q86Y13 1208 aaKnown RBP20.75■□□□□ 0.91
HDLBP-223ENST00000449864 TSPYL4Q9UJ04 414 aa20.75■□□□□ 0.91
HDLBP-223ENST00000449864 DPEP1P16444 411 aa20.74■□□□□ 0.91
HDLBP-223ENST00000449864 COL11A2P13942 1736 aaPredicted RBP20.73■□□□□ 0.91
HDLBP-223ENST00000449864 EIF4A1P60842 406 aaKnown RBP20.73■□□□□ 0.91
HDLBP-223ENST00000449864 CARMIL3Q8ND23 1372 aa20.72■□□□□ 0.91
HDLBP-223ENST00000449864 SERPINB2P05120 415 aa20.72■□□□□ 0.91
HDLBP-223ENST00000449864 TBC1D9BQ66K14 1250 aa20.72■□□□□ 0.91
HDLBP-223ENST00000449864 BCS1LQ9Y276 419 aa20.72■□□□□ 0.91
HDLBP-223ENST00000449864 GIGYF1O75420 1035 aaPredicted RBP20.71■□□□□ 0.91
HDLBP-223ENST00000449864 CAMTA2O94983 1202 aa20.71■□□□□ 0.91
HDLBP-223ENST00000449864 NBPF26B4DH59 902 aa20.7■□□□□ 0.9
HDLBP-223ENST00000449864 NBPF10Q6P3W6 841 aaKnown RBP20.7■□□□□ 0.9
HDLBP-223ENST00000449864 NBPF15Q8N660 670 aa20.7■□□□□ 0.9
HDLBP-223ENST00000449864 ZNF784Q8NCA9 323 aaPredicted RBP20.7■□□□□ 0.9
HDLBP-223ENST00000449864 ZNF652Q9Y2D9 606 aa20.7■□□□□ 0.9
HDLBP-223ENST00000449864 NPHP1O15259 732 aa20.69■□□□□ 0.9
HDLBP-223ENST00000449864 ANP32CO43423 234 aa20.69■□□□□ 0.9
HDLBP-223ENST00000449864 BABAM1Q9NWV8 329 aa20.69■□□□□ 0.9
HDLBP-223ENST00000449864 PIM2Q9P1W9 311 aa20.69■□□□□ 0.9
HDLBP-223ENST00000449864 ANKRD36CQ5JPF3 1778 aa20.68■□□□□ 0.9
HDLBP-223ENST00000449864 ARFGEF2Q9Y6D5 1785 aa20.68■□□□□ 0.9
HDLBP-223ENST00000449864 CHRNA5P30532 468 aa20.68■□□□□ 0.9
HDLBP-223ENST00000449864 SETDB2Q96T68 719 aa20.68■□□□□ 0.9
HDLBP-223ENST00000449864 LAS1LQ9Y4W2 734 aaKnown RBP20.68■□□□□ 0.9
HDLBP-223ENST00000449864 TRIM35Q9UPQ4 493 aa20.67■□□□□ 0.9
HDLBP-223ENST00000449864 SBF1O95248 1867 aa20.67■□□□□ 0.9
HDLBP-223ENST00000449864 MYL6BP14649 208 aa20.66■□□□□ 0.9
HDLBP-223ENST00000449864 NGEFQ8N5V2 710 aa20.66■□□□□ 0.9
HDLBP-223ENST00000449864 CCDC88AQ3V6T2 1871 aa20.66■□□□□ 0.9
HDLBP-223ENST00000449864 ERBB4Q15303 1308 aa20.65■□□□□ 0.9
HDLBP-223ENST00000449864 KCNA3P22001 575 aa20.65■□□□□ 0.9
HDLBP-223ENST00000449864 DALRD3Q5D0E6 543 aaKnown RBP20.65■□□□□ 0.9
HDLBP-223ENST00000449864 CLEC4GQ6UXB4 293 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms