RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 SIK1P57059 783 aa18.65■□□□□ 0.58
APP-210ENST00000448850 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.65■□□□□ 0.58
APP-210ENST00000448850 MYH14Q7Z406 1995 aaKnown RBP18.65■□□□□ 0.58
APP-210ENST00000448850 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
APP-210ENST00000448850 DNAJC10Q8IXB1 793 aa18.65■□□□□ 0.58
APP-210ENST00000448850 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
APP-210ENST00000448850 CHPF2Q9P2E5 772 aa18.64■□□□□ 0.57
APP-210ENST00000448850 DBF4Q9UBU7 674 aaPredicted RBP18.64■□□□□ 0.57
APP-210ENST00000448850 PLIN1O60240 522 aa18.63■□□□□ 0.57
APP-210ENST00000448850 ATP6V1AP38606 617 aa18.63■□□□□ 0.57
APP-210ENST00000448850 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
APP-210ENST00000448850 NOB1Q9ULX3 412 aaKnown RBP18.63■□□□□ 0.57
APP-210ENST00000448850 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
APP-210ENST00000448850 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
APP-210ENST00000448850 DDX21Q9NR30 783 aaKnown RBP eCLIP18.62■□□□□ 0.57
APP-210ENST00000448850 RREB1Q92766 1687 aa18.62■□□□□ 0.57
APP-210ENST00000448850 RGPD3A6NKT7 1758 aaPredicted RBP18.61■□□□□ 0.57
APP-210ENST00000448850 RGPD4Q7Z3J3 1758 aa18.61■□□□□ 0.57
APP-210ENST00000448850 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
APP-210ENST00000448850 STARD3NLO95772 234 aa18.61■□□□□ 0.57
APP-210ENST00000448850 PDIA6Q15084 440 aa18.61■□□□□ 0.57
APP-210ENST00000448850 G2E3Q7L622 706 aa18.6■□□□□ 0.57
APP-210ENST00000448850 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
APP-210ENST00000448850 ANXA1P04083 346 aa18.6■□□□□ 0.57
APP-210ENST00000448850 CYP19A1P11511 503 aaPredicted RBP18.6■□□□□ 0.57
APP-210ENST00000448850 ITPK1Q13572 414 aa18.6■□□□□ 0.57
APP-210ENST00000448850 PROSER3Q2NL68 480 aa18.6■□□□□ 0.57
APP-210ENST00000448850 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
APP-210ENST00000448850 A1BGP04217 495 aa18.59■□□□□ 0.57
APP-210ENST00000448850 PTPRCP08575 1304 aa18.59■□□□□ 0.57
APP-210ENST00000448850 FLIIQ13045 1269 aa18.58■□□□□ 0.57
APP-210ENST00000448850 ATF7IPQ6VMQ6 1270 aa18.58■□□□□ 0.57
APP-210ENST00000448850 PHAXQ9H814 394 aaKnown RBP18.58■□□□□ 0.57
APP-210ENST00000448850 CCNL1Q9UK58 526 aaPredicted RBP18.58■□□□□ 0.57
APP-210ENST00000448850 N4BP2Q86UW6 1770 aaPredicted RBP18.58■□□□□ 0.56
APP-210ENST00000448850 NBPF26B4DH59 902 aa18.58■□□□□ 0.56
APP-210ENST00000448850 MYL6BP14649 208 aa18.58■□□□□ 0.56
APP-210ENST00000448850 NBPF14Q5TI25 921 aa18.58■□□□□ 0.56
APP-210ENST00000448850 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.56
APP-210ENST00000448850 NBPF15Q8N660 670 aa18.58■□□□□ 0.56
APP-210ENST00000448850 PLSCR1O15162 318 aa18.57■□□□□ 0.56
APP-210ENST00000448850 APBA3O96018 575 aa18.57■□□□□ 0.56
APP-210ENST00000448850 NEFLP07196 543 aa18.57■□□□□ 0.56
APP-210ENST00000448850 TRIM27P14373 513 aa18.57■□□□□ 0.56
APP-210ENST00000448850 PIP4K2AP48426 406 aaPredicted RBP18.57■□□□□ 0.56
APP-210ENST00000448850 KCNQ4P56696 695 aa18.56■□□□□ 0.56
APP-210ENST00000448850 PDE3AQ14432 1141 aa18.56■□□□□ 0.56
APP-210ENST00000448850 LRP10Q7Z4F1 713 aa18.56■□□□□ 0.56
APP-210ENST00000448850 API5Q9BZZ5 524 aaKnown RBP18.56■□□□□ 0.56
APP-210ENST00000448850 TNNQ9UQP3 1299 aa18.56■□□□□ 0.56
APP-210ENST00000448850 C4BP0C0L5 1744 aa18.56■□□□□ 0.56
APP-210ENST00000448850 MS4A1P11836 297 aa18.56■□□□□ 0.56
APP-210ENST00000448850 IRX6P78412 446 aaPredicted RBP18.56■□□□□ 0.56
APP-210ENST00000448850 ARFGEF2Q9Y6D5 1785 aa18.55■□□□□ 0.56
APP-210ENST00000448850 CRKLP46109 303 aaKnown RBP18.55■□□□□ 0.56
APP-210ENST00000448850 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
APP-210ENST00000448850 C20orf194Q5TEA3 1177 aa18.55■□□□□ 0.56
APP-210ENST00000448850 LINC00116Q8NCU8 138 aa18.55■□□□□ 0.56
APP-210ENST00000448850 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
APP-210ENST00000448850 CCDC87Q9NVE4 849 aa18.55■□□□□ 0.56
APP-210ENST00000448850 NUP188Q5SRE5 1749 aa18.54■□□□□ 0.56
APP-210ENST00000448850 SLC27A3Q5K4L6 730 aa18.54■□□□□ 0.56
APP-210ENST00000448850 DZIP1LQ8IYY4 767 aaKnown RBP18.54■□□□□ 0.56
APP-210ENST00000448850 ZBTB1Q9Y2K1 713 aa18.54■□□□□ 0.56
APP-210ENST00000448850 INTS5Q6P9B9 1019 aaKnown RBP18.53■□□□□ 0.56
APP-210ENST00000448850 FTSJ3Q8IY81 847 aaKnown RBP18.53■□□□□ 0.56
APP-210ENST00000448850 COPS6Q7L5N1 327 aa18.53■□□□□ 0.56
APP-210ENST00000448850 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
APP-210ENST00000448850 XAGE3Q8WTP9 111 aa18.53■□□□□ 0.56
APP-210ENST00000448850 CNTNAP4Q9C0A0 1308 aa18.53■□□□□ 0.56
APP-210ENST00000448850 LRRC4BQ9NT99 713 aa18.53■□□□□ 0.56
APP-210ENST00000448850 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.56
APP-210ENST00000448850 NUP98P52948 1817 aa18.52■□□□□ 0.56
APP-210ENST00000448850 RLBP1P12271 317 aa18.52■□□□□ 0.56
APP-210ENST00000448850 AIMP1Q12904 312 aaKnown RBP18.52■□□□□ 0.56
APP-210ENST00000448850 TXNRD1Q16881 649 aa18.52■□□□□ 0.56
APP-210ENST00000448850 ABCC4O15439 1325 aa18.51■□□□□ 0.55
APP-210ENST00000448850 DDX58O95786 925 aaKnown RBP18.51■□□□□ 0.55
APP-210ENST00000448850 IL6STP40189 918 aaPredicted RBP18.51■□□□□ 0.55
APP-210ENST00000448850 RC3H1Q5TC82 1133 aaKnown RBP18.51■□□□□ 0.55
APP-210ENST00000448850 PROM2Q8N271 834 aa18.51■□□□□ 0.55
APP-210ENST00000448850 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
APP-210ENST00000448850 PI4KAP2A4QPH2 592 aa18.5■□□□□ 0.55
APP-210ENST00000448850 F6X3S4 739 aa18.5■□□□□ 0.55
APP-210ENST00000448850 HMGB2P26583 209 aaKnown RBP18.5■□□□□ 0.55
APP-210ENST00000448850 FKBP8Q14318 412 aa18.5■□□□□ 0.55
APP-210ENST00000448850 KSR2Q6VAB6 950 aa18.5■□□□□ 0.55
APP-210ENST00000448850 PI4KAP1Q8N8J0 262 aa18.5■□□□□ 0.55
APP-210ENST00000448850 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
APP-210ENST00000448850 ADCY9O60503 1353 aa18.5■□□□□ 0.55
APP-210ENST00000448850 EIF5P55010 431 aaKnown RBP18.49■□□□□ 0.55
APP-210ENST00000448850 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
APP-210ENST00000448850 PXDNLA1KZ92 1463 aa18.49■□□□□ 0.55
APP-210ENST00000448850 ANKRD36CQ5JPF3 1778 aa18.49■□□□□ 0.55
APP-210ENST00000448850 ANKRD13DQ6ZTN6 518 aa18.49■□□□□ 0.55
APP-210ENST00000448850 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
APP-210ENST00000448850 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
APP-210ENST00000448850 COG6Q9Y2V7 657 aa18.49■□□□□ 0.55
APP-210ENST00000448850 TTLL7Q6ZT98 887 aa18.48■□□□□ 0.55
APP-210ENST00000448850 NPM2Q86SE8 214 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms