RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 LTBP4Q8N2S1 1624 aa8.83□□□□□ -1
RFC4-209ENST00000448497 RLBP1P12271 317 aa8.83□□□□□ -1
RFC4-209ENST00000448497 TRIM27P14373 513 aa8.83□□□□□ -1
RFC4-209ENST00000448497 MRPL50Q8N5N7 158 aaKnown RBP8.83□□□□□ -1
RFC4-209ENST00000448497 PANK1Q8TE04 598 aa8.83□□□□□ -1
RFC4-209ENST00000448497 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
RFC4-209ENST00000448497 FRAT1Q92837 279 aaPredicted RBP8.83□□□□□ -1
RFC4-209ENST00000448497 CHMP4BQ9H444 224 aaKnown RBP8.83□□□□□ -1
RFC4-209ENST00000448497 COL22A1Q8NFW1 1626 aaPredicted RBP8.83□□□□□ -1
RFC4-209ENST00000448497 PARP4Q9UKK3 1724 aaKnown RBP8.83□□□□□ -1
RFC4-209ENST00000448497 TCERG1O14776 1098 aaKnown RBP8.82□□□□□ -1
RFC4-209ENST00000448497 DCTN1Q14203 1278 aa8.82□□□□□ -1
RFC4-209ENST00000448497 PLEKHO1Q53GL0 409 aaPredicted RBP8.82□□□□□ -1
RFC4-209ENST00000448497 MCM10Q7L590 875 aa8.82□□□□□ -1
RFC4-209ENST00000448497 TSPYL6Q8N831 410 aa8.82□□□□□ -1
RFC4-209ENST00000448497 C8orf58Q8NAV2 365 aa8.82□□□□□ -1
RFC4-209ENST00000448497 DDX19BQ9UMR2 479 aa8.82□□□□□ -1
RFC4-209ENST00000448497 AXIN2Q9Y2T1 843 aa8.82□□□□□ -1
RFC4-209ENST00000448497 COG6Q9Y2V7 657 aa8.82□□□□□ -1
RFC4-209ENST00000448497 LAS1LQ9Y4W2 734 aaKnown RBP8.82□□□□□ -1
RFC4-209ENST00000448497 ARIH1Q9Y4X5 557 aaPredicted RBP8.82□□□□□ -1
RFC4-209ENST00000448497 TAF7Q15545 349 aaPredicted RBP8.81□□□□□ -1
RFC4-209ENST00000448497 AKAP4Q5JQC9 854 aa8.81□□□□□ -1
RFC4-209ENST00000448497 LMOD2Q6P5Q4 547 aa8.81□□□□□ -1
RFC4-209ENST00000448497 IL17REQ8NFR9 667 aa8.81□□□□□ -1
RFC4-209ENST00000448497 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
RFC4-209ENST00000448497 ARHGEF1Q92888 912 aaKnown RBP8.81□□□□□ -1
RFC4-209ENST00000448497 LTV1Q96GA3 475 aaPredicted RBP8.81□□□□□ -1
RFC4-209ENST00000448497 BCL2L13Q9BXK5 485 aa8.81□□□□□ -1
RFC4-209ENST00000448497 CHMP4AQ9BY43 222 aa8.81□□□□□ -1
RFC4-209ENST00000448497 NOB1Q9ULX3 412 aaKnown RBP8.81□□□□□ -1
RFC4-209ENST00000448497 ABCC4O15439 1325 aa8.8□□□□□ -1
RFC4-209ENST00000448497 PTPRCP08575 1304 aa8.8□□□□□ -1
RFC4-209ENST00000448497 HOXB7P09629 217 aa8.8□□□□□ -1
RFC4-209ENST00000448497 FTSJ3Q8IY81 847 aaKnown RBP8.8□□□□□ -1
RFC4-209ENST00000448497 API5Q9BZZ5 524 aaKnown RBP8.8□□□□□ -1
RFC4-209ENST00000448497 ROBO1Q9Y6N7 1651 aa8.8□□□□□ -1
RFC4-209ENST00000448497 SNPHO15079 494 aa8.79□□□□□ -1
RFC4-209ENST00000448497 SLC34A2O95436 690 aa8.79□□□□□ -1
RFC4-209ENST00000448497 DDX17Q92841 729 aaKnown RBP8.79□□□□□ -1
RFC4-209ENST00000448497 LRRC59Q96AG4 307 aaKnown RBP8.79□□□□□ -1
RFC4-209ENST00000448497 OTUD5Q96G74 571 aa8.79□□□□□ -1
RFC4-209ENST00000448497 ZBTB40Q9NUA8 1239 aa8.79□□□□□ -1
RFC4-209ENST00000448497 TSPYL4Q9UJ04 414 aa8.79□□□□□ -1
RFC4-209ENST00000448497 RGS12O14924 1447 aa8.79□□□□□ -1
RFC4-209ENST00000448497 MRC1P22897 1456 aa8.78□□□□□ -1
RFC4-209ENST00000448497 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
RFC4-209ENST00000448497 HDAC1Q13547 482 aaPredicted RBP8.78□□□□□ -1
RFC4-209ENST00000448497 ZNF530Q6P9A1 599 aaPredicted RBP8.78□□□□□ -1
RFC4-209ENST00000448497 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
RFC4-209ENST00000448497 TNNQ9UQP3 1299 aa8.78□□□□□ -1
RFC4-209ENST00000448497 COL14A1Q05707 1796 aaKnown RBP8.78□□□□□ -1
RFC4-209ENST00000448497 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1
RFC4-209ENST00000448497 HEG1Q9ULI3 1381 aa8.77□□□□□ -1.01
RFC4-209ENST00000448497 RNMTO43148 476 aaKnown RBP8.77□□□□□ -1.01
RFC4-209ENST00000448497 DOK7Q18PE1 504 aa8.77□□□□□ -1.01
RFC4-209ENST00000448497 INTS3Q68E01 1043 aaKnown RBP8.77□□□□□ -1.01
RFC4-209ENST00000448497 TMEM57Q8N5G2 664 aa8.77□□□□□ -1.01
RFC4-209ENST00000448497 RWDD1Q9H446 243 aaPredicted RBP8.77□□□□□ -1.01
RFC4-209ENST00000448497 RBM19Q9Y4C8 960 aaKnown RBP8.77□□□□□ -1.01
RFC4-209ENST00000448497 PCDHB15Q9Y5E8 787 aa8.77□□□□□ -1.01
RFC4-209ENST00000448497 WDR17Q8IZU2 1322 aa8.77□□□□□ -1.01
RFC4-209ENST00000448497 PXDNLA1KZ92 1463 aa8.77□□□□□ -1.01
RFC4-209ENST00000448497 MEGF6O75095 1541 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 RIMBP2O15034 1052 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 ZBTB7BO15156 539 aaPredicted RBP8.76□□□□□ -1.01
RFC4-209ENST00000448497 TBC1D12O60347 775 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 IGHDP01880 384 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 TATP17735 454 aaPredicted RBP8.76□□□□□ -1.01
RFC4-209ENST00000448497 C1orf141Q5JVX7 400 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 CCDC30Q5VVM6 783 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 RAPGEF4Q8WZA2 1011 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 SPG7Q9UQ90 795 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 SHANK3Q9BYB0 1731 aa8.76□□□□□ -1.01
RFC4-209ENST00000448497 PLCH1Q4KWH8 1693 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 ZBTB7CA1YPR0 619 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 ELL2O00472 640 aaPredicted RBP8.75□□□□□ -1.01
RFC4-209ENST00000448497 NBR1Q14596 966 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 ITPRIPQ8IWB1 547 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 CABLES1Q8TDN4 633 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 PTCD2Q8WV60 388 aaKnown RBP8.75□□□□□ -1.01
RFC4-209ENST00000448497 ZSWIM6Q9HCJ5 1215 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 PRDM11Q9NQV5 511 aa8.75□□□□□ -1.01
RFC4-209ENST00000448497 COL16A1Q07092 1604 aaPredicted RBP8.75□□□□□ -1.01
RFC4-209ENST00000448497 HSP90AB1P08238 724 aaKnown RBP8.74□□□□□ -1.01
RFC4-209ENST00000448497 EIF4A1P60842 406 aaKnown RBP8.74□□□□□ -1.01
RFC4-209ENST00000448497 TEFQ10587 303 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 KRT24Q2M2I5 525 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 SMC5Q8IY18 1101 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 OXER1Q8TDS5 423 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 LGR6Q9HBX8 967 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 EMILIN3Q9NT22 766 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 NLRP2Q9NX02 1062 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 WNK3Q9BYP7 1800 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 PHLPP1O60346 1717 aa8.74□□□□□ -1.01
RFC4-209ENST00000448497 UBR2Q8IWV8 1755 aa8.73□□□□□ -1.01
RFC4-209ENST00000448497 KDM6AO15550 1401 aaPredicted RBP8.73□□□□□ -1.01
RFC4-209ENST00000448497 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
RFC4-209ENST00000448497 PHKG2P15735 406 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms