RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 KCPQ6ZWJ8 1503 aa23.04■■□□□ 1.28
HLCS-205ENST00000448340 SMIM5Q71RC9 77 aa23.04■■□□□ 1.28
HLCS-205ENST00000448340 CFAP44Q96MT7 982 aa23.04■■□□□ 1.28
HLCS-205ENST00000448340 KDM3BQ7LBC6 1761 aa23.04■■□□□ 1.28
HLCS-205ENST00000448340 CHL1O00533 1208 aa23.03■■□□□ 1.28
HLCS-205ENST00000448340 KCNQ3O43525 872 aa23.03■■□□□ 1.28
HLCS-205ENST00000448340 ATP6V1AP38606 617 aa23.03■■□□□ 1.28
HLCS-205ENST00000448340 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
HLCS-205ENST00000448340 SLC4A9Q96Q91 983 aa23.03■■□□□ 1.28
HLCS-205ENST00000448340 TSPYL4Q9UJ04 414 aa23.03■■□□□ 1.28
HLCS-205ENST00000448340 VSIG10Q8N0Z9 540 aa23.02■■□□□ 1.28
HLCS-205ENST00000448340 ZNF496Q96IT1 587 aaPredicted RBP23.02■■□□□ 1.28
HLCS-205ENST00000448340 FMNL2Q96PY5 1086 aa23.02■■□□□ 1.28
HLCS-205ENST00000448340 GPBP1L1Q9HC44 474 aaPredicted RBP23.02■■□□□ 1.28
HLCS-205ENST00000448340 IFT57Q9NWB7 429 aa23.02■■□□□ 1.28
HLCS-205ENST00000448340 IL16Q14005 1332 aa23.02■■□□□ 1.28
HLCS-205ENST00000448340 ZNF853P0CG23 659 aa23.01■■□□□ 1.27
HLCS-205ENST00000448340 GNAI1P63096 354 aa23.01■■□□□ 1.27
HLCS-205ENST00000448340 LAS1LQ9Y4W2 734 aaKnown RBP23.01■■□□□ 1.27
HLCS-205ENST00000448340 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
HLCS-205ENST00000448340 C4BP0C0L5 1744 aa23■■□□□ 1.27
HLCS-205ENST00000448340 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23■■□□□ 1.27
HLCS-205ENST00000448340 HEG1Q9ULI3 1381 aa23■■□□□ 1.27
HLCS-205ENST00000448340 ITPK1Q13572 414 aa22.99■■□□□ 1.27
HLCS-205ENST00000448340 AK7Q96M32 723 aa22.99■■□□□ 1.27
HLCS-205ENST00000448340 CICQ96RK0 1608 aaPredicted RBP22.99■■□□□ 1.27
HLCS-205ENST00000448340 ZNF521Q96K83 1311 aa22.99■■□□□ 1.27
HLCS-205ENST00000448340 EIF4A1P60842 406 aaKnown RBP22.98■■□□□ 1.27
HLCS-205ENST00000448340 HSPA6P17066 643 aa22.97■■□□□ 1.27
HLCS-205ENST00000448340 SSFA2P28290 1259 aa22.97■■□□□ 1.27
HLCS-205ENST00000448340 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
HLCS-205ENST00000448340 PHF14O94880 888 aa22.96■■□□□ 1.27
HLCS-205ENST00000448340 TEX13AQ9BXU3 409 aaPredicted RBP22.96■■□□□ 1.27
HLCS-205ENST00000448340 MBIPQ9NS73 344 aa22.96■■□□□ 1.27
HLCS-205ENST00000448340 TJP1Q07157 1748 aa22.96■■□□□ 1.27
HLCS-205ENST00000448340 SNRPA1P09661 255 aaKnown RBP22.95■■□□□ 1.26
HLCS-205ENST00000448340 HNRNPUQ00839 825 aaKnown RBP eCLIP22.95■■□□□ 1.26
HLCS-205ENST00000448340 DNAJC10Q8IXB1 793 aa22.95■■□□□ 1.26
HLCS-205ENST00000448340 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.26
HLCS-205ENST00000448340 COL5A3P25940 1745 aaPredicted RBP22.94■■□□□ 1.26
HLCS-205ENST00000448340 UBR3Q6ZT12 1888 aa22.94■■□□□ 1.26
HLCS-205ENST00000448340 KIF3CO14782 793 aa22.93■■□□□ 1.26
HLCS-205ENST00000448340 WWC3Q9ULE0 1092 aa22.93■■□□□ 1.26
HLCS-205ENST00000448340 CNTNAP4Q9C0A0 1308 aa22.92■■□□□ 1.26
HLCS-205ENST00000448340 STARD3NLO95772 234 aa22.92■■□□□ 1.26
HLCS-205ENST00000448340 RC3H1Q5TC82 1133 aaKnown RBP22.92■■□□□ 1.26
HLCS-205ENST00000448340 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
HLCS-205ENST00000448340 GOLGA2Q08379 1002 aa22.91■■□□□ 1.26
HLCS-205ENST00000448340 TSR2Q969E8 191 aaKnown RBP22.9■■□□□ 1.26
HLCS-205ENST00000448340 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
HLCS-205ENST00000448340 PRAMEF22A3QJZ6 481 aa22.89■■□□□ 1.25
HLCS-205ENST00000448340 CRKLP46109 303 aaKnown RBP22.89■■□□□ 1.25
HLCS-205ENST00000448340 SPINK5Q9NQ38 1064 aaPredicted RBP22.89■■□□□ 1.25
HLCS-205ENST00000448340 USP16Q9Y5T5 823 aa22.89■■□□□ 1.25
HLCS-205ENST00000448340 GNPATO15228 680 aa22.88■■□□□ 1.25
HLCS-205ENST00000448340 MYH14Q7Z406 1995 aaKnown RBP22.88■■□□□ 1.25
HLCS-205ENST00000448340 FANCIQ9NVI1 1328 aa22.87■■□□□ 1.25
HLCS-205ENST00000448340 E9PSI1 815 aa22.87■■□□□ 1.25
HLCS-205ENST00000448340 INTS5Q6P9B9 1019 aaKnown RBP22.87■■□□□ 1.25
HLCS-205ENST00000448340 CCDC87Q9NVE4 849 aa22.87■■□□□ 1.25
HLCS-205ENST00000448340 LAMB4A4D0S4 1761 aa22.86■■□□□ 1.25
HLCS-205ENST00000448340 MMP10P09238 476 aa22.86■■□□□ 1.25
HLCS-205ENST00000448340 HOXB7P09629 217 aa22.86■■□□□ 1.25
HLCS-205ENST00000448340 KRT24Q2M2I5 525 aa22.86■■□□□ 1.25
HLCS-205ENST00000448340 ZBED9Q6R2W3 1325 aa22.85■■□□□ 1.25
HLCS-205ENST00000448340 RPS6KA4O75676 772 aa22.85■■□□□ 1.25
HLCS-205ENST00000448340 SLFN5Q08AF3 891 aa22.85■■□□□ 1.25
HLCS-205ENST00000448340 PXDNLA1KZ92 1463 aa22.85■■□□□ 1.25
HLCS-205ENST00000448340 DUSP27Q5VZP5 1158 aa22.84■■□□□ 1.25
HLCS-205ENST00000448340 C8orf58Q8NAV2 365 aa22.84■■□□□ 1.25
HLCS-205ENST00000448340 RTCBQ9Y3I0 505 aaKnown RBP22.84■■□□□ 1.25
HLCS-205ENST00000448340 SOS1Q07889 1333 aaPredicted RBP22.83■■□□□ 1.25
HLCS-205ENST00000448340 TGFB2P61812 414 aa22.83■■□□□ 1.25
HLCS-205ENST00000448340 CDCA7LQ96GN5 454 aa22.83■■□□□ 1.25
HLCS-205ENST00000448340 ZBTB1Q9Y2K1 713 aa22.83■■□□□ 1.25
HLCS-205ENST00000448340 A1BGP04217 495 aa22.82■■□□□ 1.24
HLCS-205ENST00000448340 ADRA2BP18089 450 aa22.81■■□□□ 1.24
HLCS-205ENST00000448340 EIF2S2P20042 333 aaKnown RBP22.81■■□□□ 1.24
HLCS-205ENST00000448340 CANXP27824 592 aaKnown RBP22.81■■□□□ 1.24
HLCS-205ENST00000448340 TRMT2AQ8IZ69 625 aaKnown RBP22.81■■□□□ 1.24
HLCS-205ENST00000448340 ERBB4Q15303 1308 aa22.81■■□□□ 1.24
HLCS-205ENST00000448340 A0A0G2JLW4 131 aa22.8■■□□□ 1.24
HLCS-205ENST00000448340 ELL2O00472 640 aaPredicted RBP22.8■■□□□ 1.24
HLCS-205ENST00000448340 IL6STP40189 918 aaPredicted RBP22.8■■□□□ 1.24
HLCS-205ENST00000448340 EXOSC9Q06265 439 aaKnown RBP22.8■■□□□ 1.24
HLCS-205ENST00000448340 TRAPPC3LQ5T215 181 aa22.8■■□□□ 1.24
HLCS-205ENST00000448340 NLGN1Q8N2Q7 840 aa22.8■■□□□ 1.24
HLCS-205ENST00000448340 DNAJC5GQ8N7S2 189 aa22.8■■□□□ 1.24
HLCS-205ENST00000448340 TSPYL6Q8N831 410 aa22.8■■□□□ 1.24
HLCS-205ENST00000448340 CHMP4AQ9BY43 222 aa22.8■■□□□ 1.24
HLCS-205ENST00000448340 KIAA1551Q9HCM1 1747 aa22.79■■□□□ 1.24
HLCS-205ENST00000448340 TWISTNBQ3B726 338 aaPredicted RBP22.79■■□□□ 1.24
HLCS-205ENST00000448340 C10orf71Q711Q0 1435 aa22.79■■□□□ 1.24
HLCS-205ENST00000448340 KIF13BQ9NQT8 1826 aa22.78■■□□□ 1.24
HLCS-205ENST00000448340 NBPF26B4DH59 902 aa22.78■■□□□ 1.24
HLCS-205ENST00000448340 EIF5P55010 431 aaKnown RBP22.78■■□□□ 1.24
HLCS-205ENST00000448340 HDGFL1Q5TGJ6 251 aa22.78■■□□□ 1.24
HLCS-205ENST00000448340 NBPF10Q6P3W6 841 aaKnown RBP22.78■■□□□ 1.24
HLCS-205ENST00000448340 NBPF15Q8N660 670 aa22.78■■□□□ 1.24
HLCS-205ENST00000448340 ARHGEF1Q92888 912 aaKnown RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms