RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 DBF4Q9UBU7 674 aaPredicted RBP24.97■■□□□ 1.59
SGCE-207ENST00000447873 IPO8O15397 1037 aaKnown RBP24.96■■□□□ 1.59
SGCE-207ENST00000447873 NEFLP07196 543 aa24.96■■□□□ 1.59
SGCE-207ENST00000447873 ZKSCAN2Q63HK3 967 aa24.96■■□□□ 1.59
SGCE-207ENST00000447873 DNAJC10Q8IXB1 793 aa24.96■■□□□ 1.59
SGCE-207ENST00000447873 ATP6V1AP38606 617 aa24.95■■□□□ 1.58
SGCE-207ENST00000447873 STARD3NLO95772 234 aa24.94■■□□□ 1.58
SGCE-207ENST00000447873 TJP1Q07157 1748 aa24.94■■□□□ 1.58
SGCE-207ENST00000447873 ZNF831Q5JPB2 1677 aa24.93■■□□□ 1.58
SGCE-207ENST00000447873 DDX21Q9NR30 783 aaKnown RBP eCLIP24.93■■□□□ 1.58
SGCE-207ENST00000447873 ERBB4Q15303 1308 aa24.92■■□□□ 1.58
SGCE-207ENST00000447873 ANXA1P04083 346 aa24.92■■□□□ 1.58
SGCE-207ENST00000447873 ARHGAP45Q92619 1136 aa24.92■■□□□ 1.58
SGCE-207ENST00000447873 LY75O60449 1722 aa24.92■■□□□ 1.58
SGCE-207ENST00000447873 CICQ96RK0 1608 aaPredicted RBP24.91■■□□□ 1.58
SGCE-207ENST00000447873 IRX6P78412 446 aaPredicted RBP24.91■■□□□ 1.58
SGCE-207ENST00000447873 ATF7IPQ6VMQ6 1270 aa24.91■■□□□ 1.58
SGCE-207ENST00000447873 G2E3Q7L622 706 aa24.91■■□□□ 1.58
SGCE-207ENST00000447873 HYPKQ9NX55 129 aa24.91■■□□□ 1.58
SGCE-207ENST00000447873 PTPRCP08575 1304 aa24.9■■□□□ 1.58
SGCE-207ENST00000447873 PDIA6Q15084 440 aa24.9■■□□□ 1.58
SGCE-207ENST00000447873 PROSER3Q2NL68 480 aa24.9■■□□□ 1.58
SGCE-207ENST00000447873 CYP19A1P11511 503 aaPredicted RBP24.89■■□□□ 1.58
SGCE-207ENST00000447873 MYL6BP14649 208 aa24.89■■□□□ 1.58
SGCE-207ENST00000447873 FLIIQ13045 1269 aa24.89■■□□□ 1.58
SGCE-207ENST00000447873 A1BGP04217 495 aa24.88■■□□□ 1.57
SGCE-207ENST00000447873 MS4A1P11836 297 aa24.88■■□□□ 1.57
SGCE-207ENST00000447873 TRIM27P14373 513 aa24.88■■□□□ 1.57
SGCE-207ENST00000447873 ITPK1Q13572 414 aa24.88■■□□□ 1.57
SGCE-207ENST00000447873 API5Q9BZZ5 524 aaKnown RBP24.88■■□□□ 1.57
SGCE-207ENST00000447873 PHAXQ9H814 394 aaKnown RBP24.88■■□□□ 1.57
SGCE-207ENST00000447873 CCNL1Q9UK58 526 aaPredicted RBP24.88■■□□□ 1.57
SGCE-207ENST00000447873 PIP4K2AP48426 406 aaPredicted RBP24.88■■□□□ 1.57
SGCE-207ENST00000447873 PDE3AQ14432 1141 aa24.88■■□□□ 1.57
SGCE-207ENST00000447873 C20orf194Q5TEA3 1177 aa24.88■■□□□ 1.57
SGCE-207ENST00000447873 FTSJ3Q8IY81 847 aaKnown RBP24.88■■□□□ 1.57
SGCE-207ENST00000447873 FKBP5Q13451 457 aaPredicted RBP24.87■■□□□ 1.57
SGCE-207ENST00000447873 CLUAP1Q96AJ1 413 aa24.87■■□□□ 1.57
SGCE-207ENST00000447873 COL5A3P25940 1745 aaPredicted RBP24.86■■□□□ 1.57
SGCE-207ENST00000447873 NBPF26B4DH59 902 aa24.86■■□□□ 1.57
SGCE-207ENST00000447873 NBPF14Q5TI25 921 aa24.86■■□□□ 1.57
SGCE-207ENST00000447873 NBPF10Q6P3W6 841 aaKnown RBP24.86■■□□□ 1.57
SGCE-207ENST00000447873 DZIP1LQ8IYY4 767 aaKnown RBP24.86■■□□□ 1.57
SGCE-207ENST00000447873 NBPF15Q8N660 670 aa24.86■■□□□ 1.57
SGCE-207ENST00000447873 APBA3O96018 575 aa24.85■■□□□ 1.57
SGCE-207ENST00000447873 TNNQ9UQP3 1299 aa24.85■■□□□ 1.57
SGCE-207ENST00000447873 TNS1Q9HBL0 1735 aaKnown RBP24.85■■□□□ 1.57
SGCE-207ENST00000447873 KCNQ4P56696 695 aa24.84■■□□□ 1.57
SGCE-207ENST00000447873 FKBP8Q14318 412 aa24.84■■□□□ 1.57
SGCE-207ENST00000447873 PANK1Q8TE04 598 aa24.84■■□□□ 1.57
SGCE-207ENST00000447873 AIMP1Q12904 312 aaKnown RBP24.83■■□□□ 1.57
SGCE-207ENST00000447873 LRP10Q7Z4F1 713 aa24.83■■□□□ 1.57
SGCE-207ENST00000447873 TAF1LQ8IZX4 1826 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 PLSCR1O15162 318 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 RLBP1P12271 317 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 CRKLP46109 303 aaKnown RBP24.82■■□□□ 1.56
SGCE-207ENST00000447873 COPS6Q7L5N1 327 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 LINC00116Q8NCU8 138 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 XAGE3Q8WTP9 111 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 CCDC87Q9NVE4 849 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 ZBTB1Q9Y2K1 713 aa24.82■■□□□ 1.56
SGCE-207ENST00000447873 DDX58O95786 925 aaKnown RBP24.81■■□□□ 1.56
SGCE-207ENST00000447873 ZNF330Q9Y3S2 320 aaPredicted RBP24.81■■□□□ 1.56
SGCE-207ENST00000447873 SLC27A3Q5K4L6 730 aa24.8■■□□□ 1.56
SGCE-207ENST00000447873 MYH14Q7Z406 1995 aaKnown RBP24.8■■□□□ 1.56
SGCE-207ENST00000447873 ABCC4O15439 1325 aa24.8■■□□□ 1.56
SGCE-207ENST00000447873 INTS5Q6P9B9 1019 aaKnown RBP24.8■■□□□ 1.56
SGCE-207ENST00000447873 RREB1Q92766 1687 aa24.79■■□□□ 1.56
SGCE-207ENST00000447873 F6X3S4 739 aa24.79■■□□□ 1.56
SGCE-207ENST00000447873 NPM2Q86SE8 214 aaKnown RBP24.79■■□□□ 1.56
SGCE-207ENST00000447873 CRBNQ96SW2 442 aa24.79■■□□□ 1.56
SGCE-207ENST00000447873 COG6Q9Y2V7 657 aa24.79■■□□□ 1.56
SGCE-207ENST00000447873 PI4KAP2A4QPH2 592 aa24.78■■□□□ 1.56
SGCE-207ENST00000447873 IL6STP40189 918 aaPredicted RBP24.78■■□□□ 1.56
SGCE-207ENST00000447873 TXNRD1Q16881 649 aa24.78■■□□□ 1.56
SGCE-207ENST00000447873 TMEM57Q8N5G2 664 aa24.78■■□□□ 1.56
SGCE-207ENST00000447873 PI4KAP1Q8N8J0 262 aa24.78■■□□□ 1.56
SGCE-207ENST00000447873 GTF3C3Q9Y5Q9 886 aa24.78■■□□□ 1.56
SGCE-207ENST00000447873 CNTNAP4Q9C0A0 1308 aa24.78■■□□□ 1.56
SGCE-207ENST00000447873 SLC4A10Q6U841 1118 aa24.77■■□□□ 1.56
SGCE-207ENST00000447873 KSR2Q6VAB6 950 aa24.77■■□□□ 1.56
SGCE-207ENST00000447873 LRRC4BQ9NT99 713 aa24.77■■□□□ 1.56
SGCE-207ENST00000447873 RGPD3A6NKT7 1758 aaPredicted RBP24.77■■□□□ 1.56
SGCE-207ENST00000447873 RGPD4Q7Z3J3 1758 aa24.77■■□□□ 1.56
SGCE-207ENST00000447873 HMGB2P26583 209 aaKnown RBP24.76■■□□□ 1.55
SGCE-207ENST00000447873 SF3B2Q13435 895 aaKnown RBP24.76■■□□□ 1.55
SGCE-207ENST00000447873 ANKRD13DQ6ZTN6 518 aa24.76■■□□□ 1.55
SGCE-207ENST00000447873 ITPRIPQ8IWB1 547 aa24.76■■□□□ 1.55
SGCE-207ENST00000447873 ADCY9O60503 1353 aa24.76■■□□□ 1.55
SGCE-207ENST00000447873 MVPQ14764 893 aaKnown RBP24.76■■□□□ 1.55
SGCE-207ENST00000447873 RC3H1Q5TC82 1133 aaKnown RBP24.76■■□□□ 1.55
SGCE-207ENST00000447873 RIC3Q7Z5B4 369 aa24.76■■□□□ 1.55
SGCE-207ENST00000447873 DNAAF4Q8WXU2 420 aa24.76■■□□□ 1.55
SGCE-207ENST00000447873 MAP3K2Q9Y2U5 619 aa24.76■■□□□ 1.55
SGCE-207ENST00000447873 C4BP0C0L5 1744 aa24.75■■□□□ 1.55
SGCE-207ENST00000447873 PROM2Q8N271 834 aa24.75■■□□□ 1.55
SGCE-207ENST00000447873 EXOC6Q8TAG9 804 aa24.75■■□□□ 1.55
SGCE-207ENST00000447873 EIF5P55010 431 aaKnown RBP24.74■■□□□ 1.55
SGCE-207ENST00000447873 TTLL7Q6ZT98 887 aa24.74■■□□□ 1.55
SGCE-207ENST00000447873 ARXQ96QS3 562 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms