RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 GOLGA2Q08379 1002 aa15.05■□□□□ -0
LINC00408-201ENST00000447784 SLC39A6Q13433 755 aa15.05■□□□□ -0
LINC00408-201ENST00000447784 VSIG10Q8N0Z9 540 aa15.05■□□□□ -0
LINC00408-201ENST00000447784 MYH16Q9H6N6 1097 aa15.05■□□□□ -0
LINC00408-201ENST00000447784 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
LINC00408-201ENST00000447784 IL16Q14005 1332 aa15.05■□□□□ -0
LINC00408-201ENST00000447784 TAF1LQ8IZX4 1826 aa15.05■□□□□ -0
LINC00408-201ENST00000447784 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
LINC00408-201ENST00000447784 CHL1O00533 1208 aa15.04■□□□□ -0
LINC00408-201ENST00000447784 ZNF790Q6PG37 636 aa15.04■□□□□ -0
LINC00408-201ENST00000447784 DCAF8L1A6NGE4 600 aa15.03■□□□□ -0
LINC00408-201ENST00000447784 CRKLP46109 303 aaKnown RBP15.03■□□□□ -0
LINC00408-201ENST00000447784 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
LINC00408-201ENST00000447784 SMIM5Q71RC9 77 aa15.03■□□□□ -0
LINC00408-201ENST00000447784 FMNL2Q96PY5 1086 aa15.03■□□□□ -0
LINC00408-201ENST00000447784 TUBGCP6Q96RT7 1819 aa15.03■□□□□ -0
LINC00408-201ENST00000447784 COL24A1Q17RW2 1714 aa15.03■□□□□ -0
LINC00408-201ENST00000447784 MSL1Q68DK7 614 aa15.02■□□□□ -0
LINC00408-201ENST00000447784 ZBED9Q6R2W3 1325 aa15.01□□□□□ -0.01
LINC00408-201ENST00000447784 E9PSI1 815 aa15.01□□□□□ -0.01
LINC00408-201ENST00000447784 CYP19A1P11511 503 aaPredicted RBP15.01□□□□□ -0.01
LINC00408-201ENST00000447784 INTS5Q6P9B9 1019 aaKnown RBP15.01□□□□□ -0.01
LINC00408-201ENST00000447784 DNAJC10Q8IXB1 793 aa15.01□□□□□ -0.01
LINC00408-201ENST00000447784 ARHGEF1Q92888 912 aaKnown RBP15.01□□□□□ -0.01
LINC00408-201ENST00000447784 MBIPQ9NS73 344 aa15.01□□□□□ -0.01
LINC00408-201ENST00000447784 CICQ96RK0 1608 aaPredicted RBP15.01□□□□□ -0.01
LINC00408-201ENST00000447784 KCPQ6ZWJ8 1503 aa15.01□□□□□ -0.01
LINC00408-201ENST00000447784 ZNF521Q96K83 1311 aa15□□□□□ -0.01
LINC00408-201ENST00000447784 KCNQ3O43525 872 aa15□□□□□ -0.01
LINC00408-201ENST00000447784 ZNF853P0CG23 659 aa15□□□□□ -0.01
LINC00408-201ENST00000447784 NLGN1Q8N2Q7 840 aa15□□□□□ -0.01
LINC00408-201ENST00000447784 ZNF496Q96IT1 587 aaPredicted RBP15□□□□□ -0.01
LINC00408-201ENST00000447784 UBR3Q6ZT12 1888 aa14.99□□□□□ -0.01
LINC00408-201ENST00000447784 SNRPA1P09661 255 aaKnown RBP14.99□□□□□ -0.01
LINC00408-201ENST00000447784 RFC4P35249 363 aa14.99□□□□□ -0.01
LINC00408-201ENST00000447784 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
LINC00408-201ENST00000447784 TSR2Q969E8 191 aaKnown RBP14.99□□□□□ -0.01
LINC00408-201ENST00000447784 TEX13AQ9BXU3 409 aaPredicted RBP14.99□□□□□ -0.01
LINC00408-201ENST00000447784 CCDC87Q9NVE4 849 aa14.99□□□□□ -0.01
LINC00408-201ENST00000447784 STARD3NLO95772 234 aa14.98□□□□□ -0.01
LINC00408-201ENST00000447784 CD2APQ9Y5K6 639 aa14.98□□□□□ -0.01
LINC00408-201ENST00000447784 HEG1Q9ULI3 1381 aa14.98□□□□□ -0.01
LINC00408-201ENST00000447784 COL5A3P25940 1745 aaPredicted RBP14.97□□□□□ -0.01
LINC00408-201ENST00000447784 GYS1P13807 737 aa14.97□□□□□ -0.01
LINC00408-201ENST00000447784 SLFN5Q08AF3 891 aa14.97□□□□□ -0.01
LINC00408-201ENST00000447784 CHMP4AQ9BY43 222 aa14.97□□□□□ -0.01
LINC00408-201ENST00000447784 SOS1Q07889 1333 aaPredicted RBP14.96□□□□□ -0.01
LINC00408-201ENST00000447784 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.01
LINC00408-201ENST00000447784 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
LINC00408-201ENST00000447784 CDCA7LQ96GN5 454 aa14.96□□□□□ -0.01
LINC00408-201ENST00000447784 USP42Q9H9J4 1324 aaKnown RBP14.95□□□□□ -0.02
LINC00408-201ENST00000447784 TJP1Q07157 1748 aa14.95□□□□□ -0.02
LINC00408-201ENST00000447784 GIGYF1O75420 1035 aaPredicted RBP14.95□□□□□ -0.02
LINC00408-201ENST00000447784 MMP10P09238 476 aa14.95□□□□□ -0.02
LINC00408-201ENST00000447784 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
LINC00408-201ENST00000447784 ELL2O00472 640 aaPredicted RBP14.94□□□□□ -0.02
LINC00408-201ENST00000447784 DUSP27Q5VZP5 1158 aa14.94□□□□□ -0.02
LINC00408-201ENST00000447784 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
LINC00408-201ENST00000447784 ZBTB1Q9Y2K1 713 aa14.94□□□□□ -0.02
LINC00408-201ENST00000447784 HOXB7P09629 217 aa14.93□□□□□ -0.02
LINC00408-201ENST00000447784 EXOSC9Q06265 439 aaKnown RBP14.93□□□□□ -0.02
LINC00408-201ENST00000447784 NPM2Q86SE8 214 aaKnown RBP14.93□□□□□ -0.02
LINC00408-201ENST00000447784 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
LINC00408-201ENST00000447784 ZPR1O75312 459 aa14.92□□□□□ -0.02
LINC00408-201ENST00000447784 EIF2S2P20042 333 aaKnown RBP14.92□□□□□ -0.02
LINC00408-201ENST00000447784 EIF5P55010 431 aaKnown RBP14.92□□□□□ -0.02
LINC00408-201ENST00000447784 KRT24Q2M2I5 525 aa14.92□□□□□ -0.02
LINC00408-201ENST00000447784 TWISTNBQ3B726 338 aaPredicted RBP14.92□□□□□ -0.02
LINC00408-201ENST00000447784 C8orf58Q8NAV2 365 aa14.92□□□□□ -0.02
LINC00408-201ENST00000447784 SRP68Q9UHB9 627 aaKnown RBP14.92□□□□□ -0.02
LINC00408-201ENST00000447784 NARFQ9UHQ1 456 aa14.92□□□□□ -0.02
LINC00408-201ENST00000447784 SIPA1L3O60292 1781 aaPredicted RBP14.91□□□□□ -0.02
LINC00408-201ENST00000447784 COL15A1P39059 1388 aa14.91□□□□□ -0.02
LINC00408-201ENST00000447784 A0A087WZG4 1122 aa14.91□□□□□ -0.02
LINC00408-201ENST00000447784 CANXP27824 592 aaKnown RBP14.91□□□□□ -0.02
LINC00408-201ENST00000447784 IL6STP40189 918 aaPredicted RBP14.91□□□□□ -0.02
LINC00408-201ENST00000447784 FKBP8Q14318 412 aa14.91□□□□□ -0.02
LINC00408-201ENST00000447784 HDGFL1Q5TGJ6 251 aa14.91□□□□□ -0.02
LINC00408-201ENST00000447784 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
LINC00408-201ENST00000447784 PARP3Q9Y6F1 533 aa14.91□□□□□ -0.02
LINC00408-201ENST00000447784 PRAMEF22A3QJZ6 481 aa14.9□□□□□ -0.02
LINC00408-201ENST00000447784 TM4SF1P30408 202 aa14.9□□□□□ -0.02
LINC00408-201ENST00000447784 GPR162Q16538 588 aa14.9□□□□□ -0.02
LINC00408-201ENST00000447784 USPL1Q5W0Q7 1092 aa14.9□□□□□ -0.02
LINC00408-201ENST00000447784 TRMT2AQ8IZ69 625 aaKnown RBP14.9□□□□□ -0.02
LINC00408-201ENST00000447784 MYH14Q7Z406 1995 aaKnown RBP14.9□□□□□ -0.02
LINC00408-201ENST00000447784 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
LINC00408-201ENST00000447784 TSPYL6Q8N831 410 aa14.89□□□□□ -0.03
LINC00408-201ENST00000447784 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
LINC00408-201ENST00000447784 STK31Q9BXU1 1019 aa14.89□□□□□ -0.03
LINC00408-201ENST00000447784 GRIN3BO60391 1043 aa14.88□□□□□ -0.03
LINC00408-201ENST00000447784 A1BGP04217 495 aa14.88□□□□□ -0.03
LINC00408-201ENST00000447784 CT47B1P0C2W7 299 aaPredicted RBP14.88□□□□□ -0.03
LINC00408-201ENST00000447784 TGFB2P61812 414 aa14.88□□□□□ -0.03
LINC00408-201ENST00000447784 ZNF330Q9Y3S2 320 aaPredicted RBP14.88□□□□□ -0.03
LINC00408-201ENST00000447784 VIRMAQ69YN4 1812 aaKnown RBP14.87□□□□□ -0.03
LINC00408-201ENST00000447784 VAMP4O75379 141 aa14.87□□□□□ -0.03
LINC00408-201ENST00000447784 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
LINC00408-201ENST00000447784 YY1P25490 414 aa14.87□□□□□ -0.03
LINC00408-201ENST00000447784 BCL2L12Q9HB09 334 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms