RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
SREBF1-207ENST00000447641 VSIG10Q8N0Z9 540 aa18.59■□□□□ 0.57
SREBF1-207ENST00000447641 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
SREBF1-207ENST00000447641 MYH14Q7Z406 1995 aaKnown RBP18.59■□□□□ 0.57
SREBF1-207ENST00000447641 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
SREBF1-207ENST00000447641 KCNQ3O43525 872 aa18.58■□□□□ 0.56
SREBF1-207ENST00000447641 RC3H1Q5TC82 1133 aaKnown RBP18.58■□□□□ 0.56
SREBF1-207ENST00000447641 ZNF496Q96IT1 587 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-207ENST00000447641 WWC3Q9ULE0 1092 aa18.58■□□□□ 0.56
SREBF1-207ENST00000447641 ZNF526Q8TF50 670 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-207ENST00000447641 GPBP1L1Q9HC44 474 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-207ENST00000447641 KDM3BQ7LBC6 1761 aa18.56■□□□□ 0.56
SREBF1-207ENST00000447641 NEUROD2Q15784 382 aa18.56■□□□□ 0.56
SREBF1-207ENST00000447641 NCBP3Q53F19 620 aaKnown RBP18.56■□□□□ 0.56
SREBF1-207ENST00000447641 TTC5Q8N0Z6 440 aa18.56■□□□□ 0.56
SREBF1-207ENST00000447641 C4AP0C0L4 1744 aa18.56■□□□□ 0.56
SREBF1-207ENST00000447641 HEG1Q9ULI3 1381 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 CNTNAP4Q9C0A0 1308 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 PXDNLA1KZ92 1463 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 PHF14O94880 888 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 HSPA6P17066 643 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 FLAD1Q8NFF5 587 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 BABAM1Q9NWV8 329 aa18.55■□□□□ 0.56
SREBF1-207ENST00000447641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.54■□□□□ 0.56
SREBF1-207ENST00000447641 KIF3CO14782 793 aa18.54■□□□□ 0.56
SREBF1-207ENST00000447641 CYP19A1P11511 503 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-207ENST00000447641 DNAJC10Q8IXB1 793 aa18.54■□□□□ 0.56
SREBF1-207ENST00000447641 FMNL2Q96PY5 1086 aa18.54■□□□□ 0.56
SREBF1-207ENST00000447641 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
SREBF1-207ENST00000447641 INTS5Q6P9B9 1019 aaKnown RBP18.53■□□□□ 0.56
SREBF1-207ENST00000447641 AK7Q96M32 723 aa18.53■□□□□ 0.56
SREBF1-207ENST00000447641 PCNTO95613 3336 aa18.53■□□□□ 0.56
SREBF1-207ENST00000447641 CRKLP46109 303 aaKnown RBP18.52■□□□□ 0.56
SREBF1-207ENST00000447641 CCDC27Q2M243 656 aa18.52■□□□□ 0.56
SREBF1-207ENST00000447641 FAM9BQ8IZU0 186 aa18.52■□□□□ 0.56
SREBF1-207ENST00000447641 MIER1Q8N108 512 aa18.52■□□□□ 0.56
SREBF1-207ENST00000447641 TEX13AQ9BXU3 409 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-207ENST00000447641 CHL1O00533 1208 aa18.51■□□□□ 0.55
SREBF1-207ENST00000447641 RPS6KA4O75676 772 aa18.51■□□□□ 0.55
SREBF1-207ENST00000447641 SSFA2P28290 1259 aa18.51■□□□□ 0.55
SREBF1-207ENST00000447641 ARFGEF1Q9Y6D6 1849 aa18.51■□□□□ 0.55
SREBF1-207ENST00000447641 WDR90Q96KV7 1748 aa18.5■□□□□ 0.55
SREBF1-207ENST00000447641 GNPATO15228 680 aa18.5■□□□□ 0.55
SREBF1-207ENST00000447641 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
SREBF1-207ENST00000447641 SNRPA1P09661 255 aaKnown RBP18.49■□□□□ 0.55
SREBF1-207ENST00000447641 ZNF853P0CG23 659 aa18.49■□□□□ 0.55
SREBF1-207ENST00000447641 CCDC87Q9NVE4 849 aa18.49■□□□□ 0.55
SREBF1-207ENST00000447641 C10orf71Q711Q0 1435 aa18.49■□□□□ 0.55
SREBF1-207ENST00000447641 STARD3NLO95772 234 aa18.48■□□□□ 0.55
SREBF1-207ENST00000447641 ADRA2BP18089 450 aa18.48■□□□□ 0.55
SREBF1-207ENST00000447641 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
SREBF1-207ENST00000447641 PRAMEF22A3QJZ6 481 aa18.47■□□□□ 0.55
SREBF1-207ENST00000447641 WWC1Q8IX03 1113 aa18.47■□□□□ 0.55
SREBF1-207ENST00000447641 NGEFQ8N5V2 710 aa18.47■□□□□ 0.55
SREBF1-207ENST00000447641 CFAP44Q96MT7 982 aa18.47■□□□□ 0.55
SREBF1-207ENST00000447641 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
SREBF1-207ENST00000447641 USP16Q9Y5T5 823 aa18.47■□□□□ 0.55
SREBF1-207ENST00000447641 CALD1Q05682 793 aaKnown RBP18.46■□□□□ 0.55
SREBF1-207ENST00000447641 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
SREBF1-207ENST00000447641 SOS1Q07889 1333 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-207ENST00000447641 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
SREBF1-207ENST00000447641 IFT57Q9NWB7 429 aa18.45■□□□□ 0.54
SREBF1-207ENST00000447641 ZBTB1Q9Y2K1 713 aa18.44■□□□□ 0.54
SREBF1-207ENST00000447641 LAMB4A4D0S4 1761 aa18.43■□□□□ 0.54
SREBF1-207ENST00000447641 MMP10P09238 476 aa18.43■□□□□ 0.54
SREBF1-207ENST00000447641 EIF5P55010 431 aaKnown RBP18.43■□□□□ 0.54
SREBF1-207ENST00000447641 SBF1O95248 1867 aa18.42■□□□□ 0.54
SREBF1-207ENST00000447641 A1BGP04217 495 aa18.42■□□□□ 0.54
SREBF1-207ENST00000447641 GNAI1P63096 354 aa18.42■□□□□ 0.54
SREBF1-207ENST00000447641 MBIPQ9NS73 344 aa18.42■□□□□ 0.54
SREBF1-207ENST00000447641 IL16Q14005 1332 aa18.42■□□□□ 0.54
SREBF1-207ENST00000447641 IL6STP40189 918 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-207ENST00000447641 WDR63Q8IWG1 891 aa18.41■□□□□ 0.54
SREBF1-207ENST00000447641 LAS1LQ9Y4W2 734 aaKnown RBP18.41■□□□□ 0.54
SREBF1-207ENST00000447641 NBPF26B4DH59 902 aa18.4■□□□□ 0.54
SREBF1-207ENST00000447641 CANXP27824 592 aaKnown RBP18.4■□□□□ 0.54
SREBF1-207ENST00000447641 NBPF10Q6P3W6 841 aaKnown RBP18.4■□□□□ 0.54
SREBF1-207ENST00000447641 NBPF15Q8N660 670 aa18.4■□□□□ 0.54
SREBF1-207ENST00000447641 ZNF521Q96K83 1311 aa18.4■□□□□ 0.54
SREBF1-207ENST00000447641 RFC4P35249 363 aa18.39■□□□□ 0.53
SREBF1-207ENST00000447641 DNAJC5GQ8N7S2 189 aa18.39■□□□□ 0.53
SREBF1-207ENST00000447641 USP42Q9H9J4 1324 aaKnown RBP18.39■□□□□ 0.53
SREBF1-207ENST00000447641 COL15A1P39059 1388 aa18.39■□□□□ 0.53
SREBF1-207ENST00000447641 GYS1P13807 737 aa18.38■□□□□ 0.53
SREBF1-207ENST00000447641 KRT24Q2M2I5 525 aa18.38■□□□□ 0.53
SREBF1-207ENST00000447641 TNRC6CQ9HCJ0 1690 aaKnown RBP18.38■□□□□ 0.53
SREBF1-207ENST00000447641 A0A0G2JLW4 131 aa18.37■□□□□ 0.53
SREBF1-207ENST00000447641 HOXB7P09629 217 aa18.37■□□□□ 0.53
SREBF1-207ENST00000447641 NMRK2Q9NPI5 230 aa18.37■□□□□ 0.53
SREBF1-207ENST00000447641 NARFQ9UHQ1 456 aa18.37■□□□□ 0.53
SREBF1-207ENST00000447641 A0A087WZG4 1122 aa18.36■□□□□ 0.53
SREBF1-207ENST00000447641 ERBB4Q15303 1308 aa18.36■□□□□ 0.53
SREBF1-207ENST00000447641 NLGN1Q8N2Q7 840 aa18.36■□□□□ 0.53
SREBF1-207ENST00000447641 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
SREBF1-207ENST00000447641 BCS1LQ9Y276 419 aa18.36■□□□□ 0.53
SREBF1-207ENST00000447641 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-207ENST00000447641 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
SREBF1-207ENST00000447641 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
SREBF1-207ENST00000447641 KCNA3P22001 575 aa18.35■□□□□ 0.53
SREBF1-207ENST00000447641 PIP4K2AP48426 406 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms