RNA–Protein interactions for RNA: ENST00000446613.6

HDAC11-214, Transcript of histone deacetylase 11, humanhuman

TSL 5 BASIC

Gene HDAC11, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-214ENST00000446613 KCNF1Q9H3M0 494 aa19.73■□□□□ 0.75
HDAC11-214ENST00000446613 ACEP12821 1306 aa19.73■□□□□ 0.75
HDAC11-214ENST00000446613 KDM4AO75164 1064 aa19.73■□□□□ 0.75
HDAC11-214ENST00000446613 ATP2B3Q16720 1220 aa19.73■□□□□ 0.75
HDAC11-214ENST00000446613 FAM184AQ8NB25 1140 aa19.73■□□□□ 0.75
HDAC11-214ENST00000446613 GNAI3P08754 354 aa19.72■□□□□ 0.75
HDAC11-214ENST00000446613 SMAP1Q8IYB5 467 aaPredicted RBP19.72■□□□□ 0.75
HDAC11-214ENST00000446613 CCDC83Q8IWF9 413 aa19.72■□□□□ 0.75
HDAC11-214ENST00000446613 TTC14Q96N46 770 aa19.72■□□□□ 0.75
HDAC11-214ENST00000446613 PHAXQ9H814 394 aaKnown RBP19.72■□□□□ 0.75
HDAC11-214ENST00000446613 PEAK1Q9H792 1746 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 COL9A3Q14050 684 aaPredicted RBP19.71■□□□□ 0.75
HDAC11-214ENST00000446613 C3P01024 1663 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 SPDYE4A6NLX3 237 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 F13A1P00488 732 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 UBE2HP62256 183 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 UVSSAQ2YD98 709 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 MON2Q7Z3U7 1717 aa19.71■□□□□ 0.75
HDAC11-214ENST00000446613 CASTP20810 708 aaKnown RBP19.7■□□□□ 0.74
HDAC11-214ENST00000446613 PPP4R3BQ5MIZ7 849 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 FAM173BQ6P4H8 233 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 TMEM87AQ8NBN3 555 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 PI4K2BQ8TCG2 481 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 BCL2L12Q9HB09 334 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 SETD1AO15047 1707 aaKnown RBP19.7■□□□□ 0.74
HDAC11-214ENST00000446613 RICTORQ6R327 1708 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 SGSM2O43147 1006 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 ADCK5Q3MIX3 580 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 SMC3Q9UQE7 1217 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 RAD50Q92878 1312 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 NEO1Q92859 1461 aa19.7■□□□□ 0.74
HDAC11-214ENST00000446613 PLEKHG5O94827 1062 aa19.69■□□□□ 0.74
HDAC11-214ENST00000446613 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
HDAC11-214ENST00000446613 ZSCAN20P17040 1043 aaPredicted RBP19.69■□□□□ 0.74
HDAC11-214ENST00000446613 PRIMPOLQ96LW4 560 aa19.69■□□□□ 0.74
HDAC11-214ENST00000446613 FUCA2Q9BTY2 467 aa19.69■□□□□ 0.74
HDAC11-214ENST00000446613 LSG1Q9H089 658 aaKnown RBP19.69■□□□□ 0.74
HDAC11-214ENST00000446613 SSH2Q76I76 1423 aa19.69■□□□□ 0.74
HDAC11-214ENST00000446613 KIF3AQ9Y496 699 aa19.69■□□□□ 0.74
HDAC11-214ENST00000446613 NRKQ7Z2Y5 1582 aa19.69■□□□□ 0.74
HDAC11-214ENST00000446613 BCL11BQ9C0K0 894 aaPredicted RBP19.69■□□□□ 0.74
HDAC11-214ENST00000446613 GJB2P29033 226 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 CAMK4Q16566 473 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 NECAB1Q8N987 351 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 LIMCH1Q9UPQ0 1083 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 SOS1Q07889 1333 aaPredicted RBP19.68■□□□□ 0.74
HDAC11-214ENST00000446613 VPS37CA5D8V6 355 aaPredicted RBP19.68■□□□□ 0.74
HDAC11-214ENST00000446613 HMGN5P82970 282 aaKnown RBP19.68■□□□□ 0.74
HDAC11-214ENST00000446613 FERMT3Q86UX7 667 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 EYA1Q99502 592 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 SPTLC3Q9NUV7 552 aa19.68■□□□□ 0.74
HDAC11-214ENST00000446613 NBPF7P0C2Y1 421 aaPredicted RBP19.67■□□□□ 0.74
HDAC11-214ENST00000446613 PTH1RQ03431 593 aa19.67■□□□□ 0.74
HDAC11-214ENST00000446613 CCDC30Q5VVM6 783 aa19.67■□□□□ 0.74
HDAC11-214ENST00000446613 RHPN1Q8TCX5 695 aa19.67■□□□□ 0.74
HDAC11-214ENST00000446613 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
HDAC11-214ENST00000446613 SRGAP3O43295 1099 aa19.66■□□□□ 0.74
HDAC11-214ENST00000446613 IGSF3O75054 1194 aa19.66■□□□□ 0.74
HDAC11-214ENST00000446613 KIAA1524Q8TCG1 905 aa19.66■□□□□ 0.74
HDAC11-214ENST00000446613 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
HDAC11-214ENST00000446613 GTF2F1P35269 517 aaKnown RBP eCLIP19.66■□□□□ 0.74
HDAC11-214ENST00000446613 ST3GAL1Q11201 340 aa19.66■□□□□ 0.74
HDAC11-214ENST00000446613 MTMR6Q9Y217 621 aa19.66■□□□□ 0.74
HDAC11-214ENST00000446613 HYPKQ9NX55 129 aa19.65■□□□□ 0.74
HDAC11-214ENST00000446613 SSH3Q8TE77 659 aa19.65■□□□□ 0.74
HDAC11-214ENST00000446613 OVOS2A0A0J9YW53 1432 aa19.65■□□□□ 0.74
HDAC11-214ENST00000446613 OVOS2Q6IE36 1432 aa19.65■□□□□ 0.74
HDAC11-214ENST00000446613 PRPF40BQ6NWY9 871 aaKnown RBP19.64■□□□□ 0.73
HDAC11-214ENST00000446613 TCEANC2Q96MN5 208 aa19.64■□□□□ 0.73
HDAC11-214ENST00000446613 JAKMIP1Q96N16 626 aaKnown RBP19.64■□□□□ 0.73
HDAC11-214ENST00000446613 ROBO2Q9HCK4 1378 aa19.64■□□□□ 0.73
HDAC11-214ENST00000446613 NRXN3Q9Y4C0 1643 aa19.64■□□□□ 0.73
HDAC11-214ENST00000446613 ITSN1Q15811 1721 aa19.64■□□□□ 0.73
HDAC11-214ENST00000446613 CEP170BQ9Y4F5 1589 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-214ENST00000446613 ANXA1P04083 346 aa19.64■□□□□ 0.73
HDAC11-214ENST00000446613 EIF2S2P20042 333 aaKnown RBP19.64■□□□□ 0.73
HDAC11-214ENST00000446613 PTGS1P23219 599 aa19.64■□□□□ 0.73
HDAC11-214ENST00000446613 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-214ENST00000446613 NUTM2GQ5VZR2 741 aa19.63■□□□□ 0.73
HDAC11-214ENST00000446613 LUZP1Q86V48 1076 aa19.63■□□□□ 0.73
HDAC11-214ENST00000446613 AKAP12Q02952 1782 aa19.63■□□□□ 0.73
HDAC11-214ENST00000446613 U2AF2P26368 475 aaKnown RBP eCLIP19.63■□□□□ 0.73
HDAC11-214ENST00000446613 CKAP2LQ8IYA6 745 aa19.63■□□□□ 0.73
HDAC11-214ENST00000446613 LTV1Q96GA3 475 aaPredicted RBP19.63■□□□□ 0.73
HDAC11-214ENST00000446613 DMTNQ08495 405 aa19.62■□□□□ 0.73
HDAC11-214ENST00000446613 LRMPQ12912 555 aa19.62■□□□□ 0.73
HDAC11-214ENST00000446613 IL17REQ8NFR9 667 aa19.62■□□□□ 0.73
HDAC11-214ENST00000446613 LIG1P18858 919 aa19.62■□□□□ 0.73
HDAC11-214ENST00000446613 XRN1Q8IZH2 1706 aaKnown RBP19.62■□□□□ 0.73
HDAC11-214ENST00000446613 AMPHP49418 695 aa19.62■□□□□ 0.73
HDAC11-214ENST00000446613 ME3Q16798 604 aa19.62■□□□□ 0.73
HDAC11-214ENST00000446613 RGPD1P0DJD0 1748 aa19.61■□□□□ 0.73
HDAC11-214ENST00000446613 LETM1O95202 739 aaPredicted RBP19.61■□□□□ 0.73
HDAC11-214ENST00000446613 TTC6Q86TZ1 520 aa19.61■□□□□ 0.73
HDAC11-214ENST00000446613 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
HDAC11-214ENST00000446613 HDGFL1Q5TGJ6 251 aa19.61■□□□□ 0.73
HDAC11-214ENST00000446613 CNTROBQ8N137 903 aa19.61■□□□□ 0.73
HDAC11-214ENST00000446613 PDRG1Q9NUG6 133 aa19.61■□□□□ 0.73
HDAC11-214ENST00000446613 CDC37L1Q7L3B6 337 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms