RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 MORN1Q5T089 497 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 GMLQ99445 158 aa8.68□□□□□ -1.02
MCF2-206ENST00000446225 CTHP32929 405 aa8.67□□□□□ -1.02
MCF2-206ENST00000446225 PDXDC2PQ6P474 469 aa8.67□□□□□ -1.02
MCF2-206ENST00000446225 AFAP1Q8N556 730 aa8.67□□□□□ -1.02
MCF2-206ENST00000446225 SPACA7Q96KW9 195 aa8.67□□□□□ -1.02
MCF2-206ENST00000446225 PURBQ96QR8 312 aaKnown RBP8.67□□□□□ -1.02
MCF2-206ENST00000446225 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
MCF2-206ENST00000446225 MYO5CQ9NQX4 1742 aa8.67□□□□□ -1.02
MCF2-206ENST00000446225 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
MCF2-206ENST00000446225 NLGN1Q8N2Q7 840 aa8.66□□□□□ -1.02
MCF2-206ENST00000446225 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
MCF2-206ENST00000446225 DENND4BO75064 1496 aaPredicted RBP8.66□□□□□ -1.02
MCF2-206ENST00000446225 ADGRL1O94910 1474 aa8.66□□□□□ -1.02
MCF2-206ENST00000446225 PSMD2Q13200 908 aa8.66□□□□□ -1.02
MCF2-206ENST00000446225 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
MCF2-206ENST00000446225 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
MCF2-206ENST00000446225 CDC42BPAQ5VT25 1732 aa8.65□□□□□ -1.02
MCF2-206ENST00000446225 SUPT6HQ7KZ85 1726 aaKnown RBP8.65□□□□□ -1.02
MCF2-206ENST00000446225 DAB2P98082 770 aa8.65□□□□□ -1.02
MCF2-206ENST00000446225 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
MCF2-206ENST00000446225 TSEN2Q8NCE0 465 aaKnown RBP8.65□□□□□ -1.02
MCF2-206ENST00000446225 USB1Q9BQ65 265 aaKnown RBP8.65□□□□□ -1.02
MCF2-206ENST00000446225 SEPT9Q9UHD8 586 aaPredicted RBP8.65□□□□□ -1.02
MCF2-206ENST00000446225 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.65□□□□□ -1.02
MCF2-206ENST00000446225 ARHGEF12Q9NZN5 1544 aa8.65□□□□□ -1.02
MCF2-206ENST00000446225 hCG_2014768A0A024R1R8 64 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 RNF40O75150 1001 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 NPR3P17342 541 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 RBL2Q08999 1139 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 PTPRNQ16849 979 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 GPR153Q6NV75 609 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 SLC39A7Q92504 469 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 PCDHGA11Q9Y5H2 935 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 PREX2Q70Z35 1606 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 TRAPPC8Q9Y2L5 1435 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 IGBP1P78318 339 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 EHHADHQ08426 723 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 DSC3Q14574 896 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 PTPROQ16827 1216 aa8.64□□□□□ -1.03
MCF2-206ENST00000446225 CFAP74Q9C0B2 1584 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 MPSTP25325 297 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 ARID5AQ03989 594 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 PPP1R18Q6NYC8 613 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
MCF2-206ENST00000446225 KCNK17Q96T54 332 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 PRKD2Q9BZL6 878 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 PPME1Q9Y570 386 aa8.63□□□□□ -1.03
MCF2-206ENST00000446225 PDE3BQ13370 1112 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 ARMC2Q8NEN0 867 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 KCNB2Q92953 911 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 COL26A1Q96A83 441 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 INPP5FQ9Y2H2 1132 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 MYOM3Q5VTT5 1437 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 POGZQ7Z3K3 1410 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 TCEAL1Q15170 157 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 SOGA3Q5TF21 947 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 NBPF14Q5TI25 921 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 BLOC1S3Q6QNY0 202 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 CITED4Q96RK1 184 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 METTL14Q9HCE5 456 aaKnown RBP8.62□□□□□ -1.03
MCF2-206ENST00000446225 ZSWIM6Q9HCJ5 1215 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 KIAA1107Q9UPP5 1409 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 FRMPD1Q5SYB0 1578 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
MCF2-206ENST00000446225 ATP2B2Q01814 1243 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 SAMD7Q7Z3H4 446 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 DMRTB1Q96MA1 342 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 OSBPL2Q9H1P3 480 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 ABCC1P33527 1531 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 PLEKHH2Q8IVE3 1493 aa8.61□□□□□ -1.03
MCF2-206ENST00000446225 IBSPP21815 317 aaPredicted RBP8.6□□□□□ -1.03
MCF2-206ENST00000446225 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 PSMD1Q99460 953 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 MBD5Q9P267 1494 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 MIA2Q96PC5 1412 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 YEATS2Q9ULM3 1422 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
MCF2-206ENST00000446225 BMS1Q14692 1282 aaKnown RBP8.6□□□□□ -1.03
MCF2-206ENST00000446225 ZNF746Q6NUN9 644 aaPredicted RBP8.6□□□□□ -1.03
MCF2-206ENST00000446225 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
MCF2-206ENST00000446225 KLHL42Q9P2K6 505 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 EMILIN1Q9Y6C2 1016 aa8.6□□□□□ -1.03
MCF2-206ENST00000446225 SYCP2Q9BX26 1530 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 CAMSAP2Q08AD1 1489 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 ZNF518AQ6AHZ1 1483 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 RICTORQ6R327 1708 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 AAMPQ13685 434 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 CC2D2BQ6DHV5 1058 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 JAZF1Q86VZ6 243 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 SETDB2Q96T68 719 aa8.59□□□□□ -1.03
MCF2-206ENST00000446225 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms