RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 NBPF3Q9H094 633 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 RANBP17Q9H2T7 1088 aaKnown RBP3.39□□□□□ -1.87
UBBP3-201ENST00000445497 ARNT2Q9HBZ2 717 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 HOMER2Q9NSB8 354 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 FAM13BQ9NYF5 915 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 DCTN4Q9UJW0 460 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 SMC3Q9UQE7 1217 aa3.39□□□□□ -1.87
UBBP3-201ENST00000445497 TCEA3O75764 348 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 CCDC159P0C7I6 412 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 RPL17P18621 184 aaKnown RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 MAPK1P28482 360 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 SSTR3P32745 418 aaPredicted RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 DDIT3P35638 169 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 PIK3CAP42336 1068 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 CD151P48509 253 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 TDO2P48775 406 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF131P52739 623 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 EPHB1P54762 984 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 EIF5P55010 431 aaKnown RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 MDM2Q00987 491 aaPredicted RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 AMPD3Q01432 767 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 SATB1Q01826 763 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 WASHC5Q12768 1159 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 PDE1CQ14123 709 aaPredicted RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 TRIM29Q14134 588 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 KIF22Q14807 665 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 GRAMD1BQ3KR37 738 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 INO80DQ53TQ3 878 aaPredicted RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 LARP1BQ659C4 914 aaKnown RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 IQCEQ6IPM2 695 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 DAAM2Q86T65 1068 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 WDR75Q8IWA0 830 aaKnown RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 CKAP2LQ8IYA6 745 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 REM2Q8IYK8 340 aaPredicted RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 IFNL3Q8IZI9 196 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 MIGA1Q8NAN2 632 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 TMEM87AQ8NBN3 555 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 ITFG2Q969R8 447 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 L3MBTL3Q96JM7 780 aaPredicted RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 LRRC27Q9C0I9 530 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 CRISPLD2Q9H0B8 497 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 CSRNP2Q9H175 543 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 AS3MTQ9HBK9 375 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 MKRN1Q9UHC7 482 aaKnown RBP3.38□□□□□ -1.87
UBBP3-201ENST00000445497 PRDM4Q9UKN5 801 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 MKL2Q9ULH7 1088 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 INPP5FQ9Y2H2 1132 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 IKBKGQ9Y6K9 419 aa3.38□□□□□ -1.87
UBBP3-201ENST00000445497 K7ELQ4 463 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 PES1O00541 588 aaKnown RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 KIF5CO60282 957 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 DIAPH1O60610 1272 aaKnown RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 PPFIA3O75145 1194 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 CDC45O75419 566 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 RBP3P10745 1247 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 PSMA3P25788 255 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 CDC27P30260 824 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 SERPINB4P48594 390 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 MORC3Q14149 939 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 TUSC1Q2TAM9 212 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 TTC31Q49AM3 519 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 HYIQ5T013 277 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 ACBD5Q5T8D3 534 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 NFXL1Q6ZNB6 911 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 RNF135Q8IUD6 432 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 ARL6IP6Q8N6S5 226 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 KIAA1958Q8N8K9 716 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 PPHLN1Q8NEY8 458 aaKnown RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 MYRIPQ8NFW9 859 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 ATRIPQ8WXE1 791 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 SMARCC1Q92922 1105 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 CLP1Q92989 425 aaKnown RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 PAWRQ96IZ0 340 aaKnown RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 CDK5RAP3Q96JB5 506 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 ZNF830Q96NB3 372 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 IER2Q9BTL4 223 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 TMUB1Q9BVT8 246 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 ALDH8A1Q9H2A2 487 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 ALG2Q9H553 416 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 PGAP2Q9UHJ9 254 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 EVLQ9UI08 416 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 TMCC3Q9ULS5 477 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 GTF2A1LQ9UNN4 478 aa3.37□□□□□ -1.87
UBBP3-201ENST00000445497 NOVA2Q9UNW9 492 aaKnown RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.37□□□□□ -1.87
UBBP3-201ENST00000445497 IQCA1LA6NCM1 817 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 IPO5O00410 1097 aaKnown RBP3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CHL1O00533 1208 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 SLC26A4O43511 780 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 ATP9BO43861 1147 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 ORC4O43929 436 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 BPNT1O95861 308 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CCDC175P0C221 793 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 GEMIN4P57678 1058 aaKnown RBP3.36□□□□□ -1.87
UBBP3-201ENST00000445497 FANCCQ00597 558 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 SEPT2Q15019 361 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 CCDC93Q567U6 631 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 SYCP2LQ5T4T6 812 aa3.36□□□□□ -1.87
UBBP3-201ENST00000445497 C1QTNF12Q5T7M4 302 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms