RNA–Protein interactions for RNA: ENST00000445140.6

FXR1-203, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FXR1, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-203ENST00000445140 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
FXR1-203ENST00000445140 TTC5Q8N0Z6 440 aa11.33□□□□□ -0.6
FXR1-203ENST00000445140 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
FXR1-203ENST00000445140 MYH14Q7Z406 1995 aaKnown RBP11.33□□□□□ -0.6
FXR1-203ENST00000445140 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
FXR1-203ENST00000445140 KAT6BQ8WYB5 2073 aa11.32□□□□□ -0.6
FXR1-203ENST00000445140 KLHL34Q8N239 644 aa11.32□□□□□ -0.6
FXR1-203ENST00000445140 ZNF496Q96IT1 587 aaPredicted RBP11.31□□□□□ -0.6
FXR1-203ENST00000445140 TSHZ2Q9NRE2 1034 aa11.31□□□□□ -0.6
FXR1-203ENST00000445140 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
FXR1-203ENST00000445140 TWISTNBQ3B726 338 aaPredicted RBP11.31□□□□□ -0.6
FXR1-203ENST00000445140 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
FXR1-203ENST00000445140 ANP32EQ9BTT0 268 aa11.31□□□□□ -0.6
FXR1-203ENST00000445140 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
FXR1-203ENST00000445140 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
FXR1-203ENST00000445140 C8orf58Q8NAV2 365 aa11.3□□□□□ -0.6
FXR1-203ENST00000445140 ASAP1Q9ULH1 1129 aa11.3□□□□□ -0.6
FXR1-203ENST00000445140 LOC102724428A0A0B4J2F2 783 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 A0A0G2JS52 829 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 SIK1P57059 783 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 CCDC30Q5VVM6 783 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 LRP10Q7Z4F1 713 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 LAMB2P55268 1798 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 PTPRCP08575 1304 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 KIF16BQ96L93 1317 aa11.29□□□□□ -0.6
FXR1-203ENST00000445140 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
FXR1-203ENST00000445140 ATP10DQ9P241 1426 aa11.28□□□□□ -0.6
FXR1-203ENST00000445140 KCNQ3O43525 872 aa11.28□□□□□ -0.6
FXR1-203ENST00000445140 KCNQ2O43526 872 aa11.28□□□□□ -0.6
FXR1-203ENST00000445140 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
FXR1-203ENST00000445140 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
FXR1-203ENST00000445140 CYP19A1P11511 503 aaPredicted RBP11.28□□□□□ -0.6
FXR1-203ENST00000445140 DDX21Q9NR30 783 aaKnown RBP eCLIP11.28□□□□□ -0.6
FXR1-203ENST00000445140 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.6
FXR1-203ENST00000445140 DBF4Q9UBU7 674 aaPredicted RBP11.27□□□□□ -0.6
FXR1-203ENST00000445140 NUP98P52948 1817 aa11.27□□□□□ -0.61
FXR1-203ENST00000445140 STARD3NLO95772 234 aa11.27□□□□□ -0.61
FXR1-203ENST00000445140 PDIA6Q15084 440 aa11.27□□□□□ -0.61
FXR1-203ENST00000445140 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.61
FXR1-203ENST00000445140 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
FXR1-203ENST00000445140 HYPKQ9NX55 129 aa11.27□□□□□ -0.61
FXR1-203ENST00000445140 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
FXR1-203ENST00000445140 SLC39A6Q13433 755 aa11.26□□□□□ -0.61
FXR1-203ENST00000445140 TSPYL6Q8N831 410 aa11.26□□□□□ -0.61
FXR1-203ENST00000445140 ACSBG1Q96GR2 724 aa11.26□□□□□ -0.61
FXR1-203ENST00000445140 CAMKK2Q96RR4 588 aa11.26□□□□□ -0.61
FXR1-203ENST00000445140 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
FXR1-203ENST00000445140 RCAN3Q9UKA8 241 aa11.26□□□□□ -0.61
FXR1-203ENST00000445140 IL6STP40189 918 aaPredicted RBP11.26□□□□□ -0.61
FXR1-203ENST00000445140 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
FXR1-203ENST00000445140 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
FXR1-203ENST00000445140 TRIM37O94972 964 aa11.24□□□□□ -0.61
FXR1-203ENST00000445140 MS4A1P11836 297 aa11.24□□□□□ -0.61
FXR1-203ENST00000445140 ITPK1Q13572 414 aa11.24□□□□□ -0.61
FXR1-203ENST00000445140 HDGFL1Q5TGJ6 251 aa11.24□□□□□ -0.61
FXR1-203ENST00000445140 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
FXR1-203ENST00000445140 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
FXR1-203ENST00000445140 A0A087WZG4 1122 aa11.24□□□□□ -0.61
FXR1-203ENST00000445140 INTS5Q6P9B9 1019 aaKnown RBP11.24□□□□□ -0.61
FXR1-203ENST00000445140 CCDC87Q9NVE4 849 aa11.24□□□□□ -0.61
FXR1-203ENST00000445140 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
FXR1-203ENST00000445140 COL15A1P39059 1388 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 BAG6P46379 1132 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 SSH1Q8WYL5 1049 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 STK31Q9BXU1 1019 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 ABCC4O15439 1325 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 EIF5P55010 431 aaKnown RBP11.23□□□□□ -0.61
FXR1-203ENST00000445140 AAMPQ13685 434 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 PDE3AQ14432 1141 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 PTF1AQ7RTS3 328 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 CCNL1Q9UK58 526 aaPredicted RBP11.23□□□□□ -0.61
FXR1-203ENST00000445140 RIC1Q4ADV7 1423 aa11.23□□□□□ -0.61
FXR1-203ENST00000445140 ERVV-1B6SEH8 477 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 IPO8O15397 1037 aaKnown RBP11.22□□□□□ -0.61
FXR1-203ENST00000445140 RPS6KA4O75676 772 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 TXNRD1Q16881 649 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 DNAJC10Q8IXB1 793 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.22□□□□□ -0.61
FXR1-203ENST00000445140 SYTL4Q96C24 671 aaPredicted RBP11.22□□□□□ -0.61
FXR1-203ENST00000445140 SSFA2P28290 1259 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 KRT24Q2M2I5 525 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 LINC00116Q8NCU8 138 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 API5Q9BZZ5 524 aaKnown RBP11.22□□□□□ -0.61
FXR1-203ENST00000445140 USP16Q9Y5T5 823 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
FXR1-203ENST00000445140 PROM2Q8N271 834 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
FXR1-203ENST00000445140 NBPF26B4DH59 902 aa11.21□□□□□ -0.61
FXR1-203ENST00000445140 CRKLP46109 303 aaKnown RBP11.21□□□□□ -0.61
FXR1-203ENST00000445140 NBR1Q14596 966 aa11.21□□□□□ -0.61
FXR1-203ENST00000445140 NBPF14Q5TI25 921 aa11.21□□□□□ -0.61
FXR1-203ENST00000445140 NBPF10Q6P3W6 841 aaKnown RBP11.21□□□□□ -0.61
FXR1-203ENST00000445140 NBPF15Q8N660 670 aa11.21□□□□□ -0.61
FXR1-203ENST00000445140 APBA3O96018 575 aa11.21□□□□□ -0.62
FXR1-203ENST00000445140 FAM182BQ5T319 152 aa11.21□□□□□ -0.62
FXR1-203ENST00000445140 UPF1Q92900 1129 aaKnown RBP eCLIP11.21□□□□□ -0.62
FXR1-203ENST00000445140 KIF13BQ9NQT8 1826 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms