RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 NFE2L2Q16236 605 aa29.53■■■□□ 2.32
LMBR1-211ENST00000444719 PRKRIP1Q9H875 184 aaPredicted RBP29.53■■■□□ 2.32
LMBR1-211ENST00000444719 USP42Q9H9J4 1324 aaKnown RBP29.52■■■□□ 2.32
LMBR1-211ENST00000444719 ZPR1O75312 459 aa29.5■■■□□ 2.31
LMBR1-211ENST00000444719 FKBP8Q14318 412 aa29.5■■■□□ 2.31
LMBR1-211ENST00000444719 TEX13AQ9BXU3 409 aaPredicted RBP29.5■■■□□ 2.31
LMBR1-211ENST00000444719 MIS18AQ9NYP9 233 aa29.5■■■□□ 2.31
LMBR1-211ENST00000444719 TAF7Q15545 349 aaPredicted RBP29.49■■■□□ 2.31
LMBR1-211ENST00000444719 USPL1Q5W0Q7 1092 aa29.49■■■□□ 2.31
LMBR1-211ENST00000444719 THUMPD2Q9BTF0 503 aaKnown RBP29.49■■■□□ 2.31
LMBR1-211ENST00000444719 COL15A1P39059 1388 aa29.49■■■□□ 2.31
LMBR1-211ENST00000444719 CHD4Q14839 1912 aa29.49■■■□□ 2.31
LMBR1-211ENST00000444719 UTRNP46939 3433 aa29.49■■■□□ 2.31
LMBR1-211ENST00000444719 PARP3Q9Y6F1 533 aa29.48■■■□□ 2.31
LMBR1-211ENST00000444719 WWC3Q9ULE0 1092 aa29.47■■■□□ 2.31
LMBR1-211ENST00000444719 GOLGB1Q14789 3259 aaKnown RBP29.47■■■□□ 2.31
LMBR1-211ENST00000444719 PRAMEF22A3QJZ6 481 aa29.46■■■□□ 2.31
LMBR1-211ENST00000444719 A1BGP04217 495 aa29.46■■■□□ 2.31
LMBR1-211ENST00000444719 YBX3P16989 372 aaKnown RBP eCLIP29.46■■■□□ 2.313e-7■■■□□ 18.7
LMBR1-211ENST00000444719 CCDC146Q8IYE0 955 aa29.46■■■□□ 2.31
LMBR1-211ENST00000444719 ZNF330Q9Y3S2 320 aaPredicted RBP29.46■■■□□ 2.31
LMBR1-211ENST00000444719 WDR43Q15061 677 aaKnown RBP eCLIP29.45■■■□□ 2.31
LMBR1-211ENST00000444719 USP16Q9Y5T5 823 aa29.45■■■□□ 2.31
LMBR1-211ENST00000444719 ZNF316A6NFI3 1004 aaPredicted RBP29.44■■■□□ 2.3
LMBR1-211ENST00000444719 NARFQ9UHQ1 456 aa29.44■■■□□ 2.3
LMBR1-211ENST00000444719 KIF13BQ9NQT8 1826 aa29.43■■■□□ 2.3
LMBR1-211ENST00000444719 EIF5P55010 431 aaKnown RBP29.43■■■□□ 2.3
LMBR1-211ENST00000444719 RIPK4P57078 832 aa29.43■■■□□ 2.3
LMBR1-211ENST00000444719 N4BP2Q86UW6 1770 aaPredicted RBP29.43■■■□□ 2.3
LMBR1-211ENST00000444719 SNRPA1P09661 255 aaKnown RBP29.41■■■□□ 2.3
LMBR1-211ENST00000444719 PIP4K2AP48426 406 aaPredicted RBP29.41■■■□□ 2.3
LMBR1-211ENST00000444719 DDR1Q08345 913 aa29.41■■■□□ 2.3
LMBR1-211ENST00000444719 RRP7AQ9Y3A4 280 aaKnown RBP29.41■■■□□ 2.3
LMBR1-211ENST00000444719 TM4SF1P30408 202 aa29.4■■■□□ 2.3
LMBR1-211ENST00000444719 TMPOP42166 694 aaKnown RBP29.4■■■□□ 2.3
LMBR1-211ENST00000444719 ADAMTS8Q9UP79 889 aa29.4■■■□□ 2.3
LMBR1-211ENST00000444719 KDM3BQ7LBC6 1761 aa29.39■■■□□ 2.3
LMBR1-211ENST00000444719 NEUROD2Q15784 382 aa29.39■■■□□ 2.3
LMBR1-211ENST00000444719 BCL2L12Q9HB09 334 aa29.39■■■□□ 2.3
LMBR1-211ENST00000444719 A0A087WZG4 1122 aa29.38■■■□□ 2.29
LMBR1-211ENST00000444719 PNISRQ8TF01 805 aaKnown RBP29.38■■■□□ 2.29
LMBR1-211ENST00000444719 TBC1D2BQ9UPU7 963 aa29.38■■■□□ 2.29
LMBR1-211ENST00000444719 C10orf71Q711Q0 1435 aa29.37■■■□□ 2.29
LMBR1-211ENST00000444719 IL6STP40189 918 aaPredicted RBP29.37■■■□□ 2.29
LMBR1-211ENST00000444719 KIAA1551Q9HCM1 1747 aa29.37■■■□□ 2.29
LMBR1-211ENST00000444719 AFDNP55196 1824 aaKnown RBP29.36■■■□□ 2.29
LMBR1-211ENST00000444719 A0A0G2JLW4 131 aa29.36■■■□□ 2.29
LMBR1-211ENST00000444719 POLRMTO00411 1230 aaKnown RBP29.36■■■□□ 2.29
LMBR1-211ENST00000444719 GRIN3BO60391 1043 aa29.36■■■□□ 2.29
LMBR1-211ENST00000444719 NFIXQ14938 502 aa29.36■■■□□ 2.29
LMBR1-211ENST00000444719 NPM2Q86SE8 214 aaKnown RBP29.36■■■□□ 2.29
LMBR1-211ENST00000444719 RUNDC1Q96C34 613 aa29.36■■■□□ 2.29
LMBR1-211ENST00000444719 PXDNLA1KZ92 1463 aa29.35■■■□□ 2.29
LMBR1-211ENST00000444719 TGFB2P61812 414 aa29.34■■■□□ 2.29
LMBR1-211ENST00000444719 BICDL1Q6ZP65 573 aa29.34■■■□□ 2.29
LMBR1-211ENST00000444719 EIF4A1P60842 406 aaKnown RBP29.32■■■□□ 2.28
LMBR1-211ENST00000444719 DPEP1P16444 411 aa29.31■■■□□ 2.28
LMBR1-211ENST00000444719 LMOD3Q0VAK6 560 aa29.31■■■□□ 2.28
LMBR1-211ENST00000444719 LAMB4A4D0S4 1761 aa29.31■■■□□ 2.28
LMBR1-211ENST00000444719 SCN7AQ01118 1682 aa29.31■■■□□ 2.28
LMBR1-211ENST00000444719 TSPYL4Q9UJ04 414 aa29.3■■■□□ 2.28
LMBR1-211ENST00000444719 NBPF26B4DH59 902 aa29.29■■■□□ 2.28
LMBR1-211ENST00000444719 GIGYF1O75420 1035 aaPredicted RBP29.29■■■□□ 2.28
LMBR1-211ENST00000444719 TBC1D9BQ66K14 1250 aa29.29■■■□□ 2.28
LMBR1-211ENST00000444719 NBPF10Q6P3W6 841 aaKnown RBP29.29■■■□□ 2.28
LMBR1-211ENST00000444719 DZIP3Q86Y13 1208 aaKnown RBP29.29■■■□□ 2.28
LMBR1-211ENST00000444719 NBPF15Q8N660 670 aa29.29■■■□□ 2.28
LMBR1-211ENST00000444719 SERPINB2P05120 415 aa29.28■■■□□ 2.28
LMBR1-211ENST00000444719 CCDC184Q52MB2 194 aa29.28■■■□□ 2.28
LMBR1-211ENST00000444719 CAMTA2O94983 1202 aa29.27■■■□□ 2.28
LMBR1-211ENST00000444719 BRCA1P38398 1863 aaKnown RBP29.27■■■□□ 2.28
LMBR1-211ENST00000444719 BCORQ6W2J9 1755 aa29.26■■■□□ 2.28
LMBR1-211ENST00000444719 NRXN2Q9P2S2 1712 aa29.26■■■□□ 2.27
LMBR1-211ENST00000444719 TRIM35Q9UPQ4 493 aa29.26■■■□□ 2.27
LMBR1-211ENST00000444719 BCS1LQ9Y276 419 aa29.26■■■□□ 2.27
LMBR1-211ENST00000444719 KCNA3P22001 575 aa29.25■■■□□ 2.27
LMBR1-211ENST00000444719 CHRNA5P30532 468 aa29.24■■■□□ 2.27
LMBR1-211ENST00000444719 NGEFQ8N5V2 710 aa29.24■■■□□ 2.27
LMBR1-211ENST00000444719 ZNF784Q8NCA9 323 aaPredicted RBP29.24■■■□□ 2.27
LMBR1-211ENST00000444719 LAS1LQ9Y4W2 734 aaKnown RBP29.24■■■□□ 2.27
LMBR1-211ENST00000444719 ANP32CO43423 234 aa29.21■■■□□ 2.27
LMBR1-211ENST00000444719 APAF1O14727 1248 aa29.2■■■□□ 2.26
LMBR1-211ENST00000444719 CCDC24Q8N4L8 307 aa29.2■■■□□ 2.26
LMBR1-211ENST00000444719 SETDB2Q96T68 719 aa29.2■■■□□ 2.26
LMBR1-211ENST00000444719 PIM2Q9P1W9 311 aa29.2■■■□□ 2.26
LMBR1-211ENST00000444719 MYL6BP14649 208 aa29.19■■■□□ 2.26
LMBR1-211ENST00000444719 BABAM1Q9NWV8 329 aa29.19■■■□□ 2.26
LMBR1-211ENST00000444719 CARMIL3Q8ND23 1372 aa29.18■■■□□ 2.26
LMBR1-211ENST00000444719 EIF2S2P20042 333 aaKnown RBP29.17■■■□□ 2.26
LMBR1-211ENST00000444719 ARFGEF1Q9Y6D6 1849 aa29.16■■■□□ 2.26
LMBR1-211ENST00000444719 ZNF652Q9Y2D9 606 aa29.16■■■□□ 2.26
LMBR1-211ENST00000444719 ANKRD31Q8N7Z5 1873 aa29.16■■■□□ 2.26
LMBR1-211ENST00000444719 CHL1O00533 1208 aa29.15■■■□□ 2.26
LMBR1-211ENST00000444719 NPHP1O15259 732 aa29.15■■■□□ 2.26
LMBR1-211ENST00000444719 PRR5LQ6MZQ0 368 aa29.15■■■□□ 2.26
LMBR1-211ENST00000444719 CLEC4GQ6UXB4 293 aa29.15■■■□□ 2.26
LMBR1-211ENST00000444719 ARHGAP27Q6ZUM4 889 aa29.15■■■□□ 2.26
LMBR1-211ENST00000444719 SENP3-EIF4A1A0A087X0R7 540 aa29.14■■■□□ 2.26
LMBR1-211ENST00000444719 HLFQ16534 295 aa29.14■■■□□ 2.26
LMBR1-211ENST00000444719 KRT24Q2M2I5 525 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms