RNA–Protein interactions for RNA: ENST00000443796.5

EPHA4-209, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 584 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-209ENST00000443796 IFFO2Q5TF58 517 aa10.51□□□□□ -0.73
EPHA4-209ENST00000443796 DESI1Q6ICB0 168 aa10.51□□□□□ -0.73
EPHA4-209ENST00000443796 UNC5CLQ8IV45 518 aa10.51□□□□□ -0.73
EPHA4-209ENST00000443796 CCDC24Q8N4L8 307 aa10.51□□□□□ -0.73
EPHA4-209ENST00000443796 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.51□□□□□ -0.73
EPHA4-209ENST00000443796 E9PCH4 1651 aa10.5□□□□□ -0.73
EPHA4-209ENST00000443796 SEPT12Q8IYM1 358 aa10.5□□□□□ -0.73
EPHA4-209ENST00000443796 SLIT2O94813 1529 aa10.49□□□□□ -0.73
EPHA4-209ENST00000443796 LYPD8Q6UX82 237 aa10.49□□□□□ -0.73
EPHA4-209ENST00000443796 ADGRL2O95490 1459 aa10.49□□□□□ -0.73
EPHA4-209ENST00000443796 RNF223E7ERA6 249 aa10.48□□□□□ -0.73
EPHA4-209ENST00000443796 PER1O15534 1290 aaPredicted RBP10.48□□□□□ -0.73
EPHA4-209ENST00000443796 R3HDM1Q15032 1099 aaKnown RBP10.48□□□□□ -0.73
EPHA4-209ENST00000443796 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
EPHA4-209ENST00000443796 FCF1Q9Y324 198 aaKnown RBP10.48□□□□□ -0.73
EPHA4-209ENST00000443796 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
EPHA4-209ENST00000443796 VPS8Q8N3P4 1428 aa10.48□□□□□ -0.73
EPHA4-209ENST00000443796 ANKRD50Q9ULJ7 1429 aa10.48□□□□□ -0.73
EPHA4-209ENST00000443796 PXDNQ92626 1479 aa10.48□□□□□ -0.73
EPHA4-209ENST00000443796 USP17L8P0C7I0 530 aa10.47□□□□□ -0.73
EPHA4-209ENST00000443796 CTHP32929 405 aa10.47□□□□□ -0.73
EPHA4-209ENST00000443796 BAG6P46379 1132 aa10.47□□□□□ -0.73
EPHA4-209ENST00000443796 IQGAP3Q86VI3 1631 aa10.47□□□□□ -0.73
EPHA4-209ENST00000443796 UTRNP46939 3433 aa10.46□□□□□ -0.73
EPHA4-209ENST00000443796 XPCQ01831 940 aaPredicted RBP10.46□□□□□ -0.73
EPHA4-209ENST00000443796 PTPRNQ16849 979 aa10.46□□□□□ -0.73
EPHA4-209ENST00000443796 KRT27Q7Z3Y8 459 aa10.46□□□□□ -0.73
EPHA4-209ENST00000443796 BANK1Q8NDB2 785 aa10.46□□□□□ -0.73
EPHA4-209ENST00000443796 LRRN4Q8WUT4 740 aa10.46□□□□□ -0.73
EPHA4-209ENST00000443796 ROBO2Q9HCK4 1378 aa10.46□□□□□ -0.74
EPHA4-209ENST00000443796 NPHP3Q7Z494 1330 aa10.45□□□□□ -0.74
EPHA4-209ENST00000443796 A0A0G2JS52 829 aa10.45□□□□□ -0.74
EPHA4-209ENST00000443796 CCNYL3P0C7X3 344 aa10.45□□□□□ -0.74
EPHA4-209ENST00000443796 VPS72Q15906 364 aa10.44□□□□□ -0.74
EPHA4-209ENST00000443796 ANKLE1Q8NAG6 615 aa10.44□□□□□ -0.74
EPHA4-209ENST00000443796 SNRKQ9NRH2 765 aa10.44□□□□□ -0.74
EPHA4-209ENST00000443796 FOXO3O43524 673 aa10.43□□□□□ -0.74
EPHA4-209ENST00000443796 ESCO1Q5FWF5 840 aa10.43□□□□□ -0.74
EPHA4-209ENST00000443796 EVA1BQ9NVM1 165 aa10.42□□□□□ -0.74
EPHA4-209ENST00000443796 USP32Q8NFA0 1604 aa10.42□□□□□ -0.74
EPHA4-209ENST00000443796 ZBTB24O43167 697 aaPredicted RBP10.41□□□□□ -0.74
EPHA4-209ENST00000443796 KCNH2Q12809 1159 aa10.41□□□□□ -0.74
EPHA4-209ENST00000443796 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
EPHA4-209ENST00000443796 MAP10Q9P2G4 905 aa10.41□□□□□ -0.74
EPHA4-209ENST00000443796 NEXMIFQ5QGS0 1516 aa10.41□□□□□ -0.74
EPHA4-209ENST00000443796 RGPD1P0DJD0 1748 aa10.41□□□□□ -0.74
EPHA4-209ENST00000443796 FLIIQ13045 1269 aa10.4□□□□□ -0.74
EPHA4-209ENST00000443796 HMX1Q9NP08 348 aaPredicted RBP10.4□□□□□ -0.74
EPHA4-209ENST00000443796 PLCH1Q4KWH8 1693 aa10.4□□□□□ -0.74
EPHA4-209ENST00000443796 DISP2A7MBM2 1401 aa10.4□□□□□ -0.75
EPHA4-209ENST00000443796 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.75
EPHA4-209ENST00000443796 CEP350Q5VT06 3117 aa10.4□□□□□ -0.75
EPHA4-209ENST00000443796 SPATA31A3Q5VYP0 1347 aa10.39□□□□□ -0.75
EPHA4-209ENST00000443796 TNS1Q9HBL0 1735 aaKnown RBP10.39□□□□□ -0.75
EPHA4-209ENST00000443796 NWD2Q9ULI1 1742 aa10.39□□□□□ -0.75
EPHA4-209ENST00000443796 NR6A1Q15406 480 aa10.39□□□□□ -0.75
EPHA4-209ENST00000443796 EZH2Q15910 746 aaKnown RBP10.39□□□□□ -0.75
EPHA4-209ENST00000443796 FAM182BQ5T319 152 aa10.39□□□□□ -0.75
EPHA4-209ENST00000443796 PTCRAQ6ISU1 281 aaPredicted RBP10.39□□□□□ -0.75
EPHA4-209ENST00000443796 CCDC9Q9Y3X0 531 aaKnown RBP10.39□□□□□ -0.75
EPHA4-209ENST00000443796 CDC42BPGQ6DT37 1551 aa10.39□□□□□ -0.75
EPHA4-209ENST00000443796 PLA2G2CQ5R387 149 aa10.38□□□□□ -0.75
EPHA4-209ENST00000443796 HFM1A2PYH4 1435 aa10.38□□□□□ -0.75
EPHA4-209ENST00000443796 LRPPRCP42704 1394 aaKnown RBP10.38□□□□□ -0.75
EPHA4-209ENST00000443796 APBB1O00213 710 aa10.37□□□□□ -0.75
EPHA4-209ENST00000443796 F12P00748 615 aaPredicted RBP10.37□□□□□ -0.75
EPHA4-209ENST00000443796 MYT1Q01538 1121 aa10.37□□□□□ -0.75
EPHA4-209ENST00000443796 MTMR14Q8NCE2 650 aa10.37□□□□□ -0.75
EPHA4-209ENST00000443796 CAMKK2Q96RR4 588 aa10.37□□□□□ -0.75
EPHA4-209ENST00000443796 SENP3-EIF4A1A0A087X0R7 540 aa10.36□□□□□ -0.75
EPHA4-209ENST00000443796 MCM6Q14566 821 aa10.36□□□□□ -0.75
EPHA4-209ENST00000443796 EPS8L1Q8TE68 723 aa10.36□□□□□ -0.75
EPHA4-209ENST00000443796 UNC93B1Q9H1C4 597 aa10.36□□□□□ -0.75
EPHA4-209ENST00000443796 NUP155O75694 1391 aa10.36□□□□□ -0.75
EPHA4-209ENST00000443796 FAM83GA6ND36 823 aa10.35□□□□□ -0.75
EPHA4-209ENST00000443796 SLC19A1P41440 591 aa10.35□□□□□ -0.75
EPHA4-209ENST00000443796 ZNF784Q8NCA9 323 aaPredicted RBP10.35□□□□□ -0.75
EPHA4-209ENST00000443796 PRM3Q9NNZ6 103 aa10.35□□□□□ -0.75
EPHA4-209ENST00000443796 CAMTA1Q9Y6Y1 1673 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 NAIPQ13075 1403 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 NRAPQ86VF7 1730 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 ABCA3Q99758 1704 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 CD2BP2O95400 341 aaKnown RBP10.34□□□□□ -0.75
EPHA4-209ENST00000443796 FAM50AQ14320 339 aaKnown RBP10.34□□□□□ -0.75
EPHA4-209ENST00000443796 LIAT1Q6ZQX7 453 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 PRKD2Q9BZL6 878 aa10.34□□□□□ -0.75
EPHA4-209ENST00000443796 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 CLTCL1P53675 1640 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 RPIAP49247 311 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 KRT28Q7Z3Y7 464 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 ARMC2Q8NEN0 867 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 TRIM34Q9BYJ4 488 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 NINLQ9Y2I6 1382 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 TNS3Q68CZ2 1445 aa10.33□□□□□ -0.76
EPHA4-209ENST00000443796 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
EPHA4-209ENST00000443796 BAP1Q92560 729 aa10.32□□□□□ -0.76
EPHA4-209ENST00000443796 PPP1R1BQ9UD71 204 aaPredicted RBP10.32□□□□□ -0.76
EPHA4-209ENST00000443796 KIF1AQ12756 1690 aa10.31□□□□□ -0.76
EPHA4-209ENST00000443796 RREB1Q92766 1687 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms