RNA–Protein interactions for RNA: ENST00000443719.1

LINC01046-201, Transcript of long intergenic non-protein coding RNA 1046, humanhuman

TSL 3 BASIC

Gene LINC01046, Length 405 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01046-201ENST00000443719 TJP1Q07157 1748 aa16.5■□□□□ 0.23
LINC01046-201ENST00000443719 GIGYF1O75420 1035 aaPredicted RBP16.5■□□□□ 0.23
LINC01046-201ENST00000443719 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
LINC01046-201ENST00000443719 EXOSC9Q06265 439 aaKnown RBP16.5■□□□□ 0.23
LINC01046-201ENST00000443719 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
LINC01046-201ENST00000443719 CCDC87Q9NVE4 849 aa16.5■□□□□ 0.23
LINC01046-201ENST00000443719 C4BP0C0L5 1744 aa16.5■□□□□ 0.23
LINC01046-201ENST00000443719 CYP19A1P11511 503 aaPredicted RBP16.49■□□□□ 0.23
LINC01046-201ENST00000443719 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
LINC01046-201ENST00000443719 ZNF827Q17R98 1081 aa16.49■□□□□ 0.23
LINC01046-201ENST00000443719 TWISTNBQ3B726 338 aaPredicted RBP16.49■□□□□ 0.23
LINC01046-201ENST00000443719 ANO8Q9HCE9 1232 aaPredicted RBP16.49■□□□□ 0.23
LINC01046-201ENST00000443719 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
LINC01046-201ENST00000443719 USP16Q9Y5T5 823 aa16.49■□□□□ 0.23
LINC01046-201ENST00000443719 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
LINC01046-201ENST00000443719 TAF1LQ8IZX4 1826 aa16.48■□□□□ 0.23
LINC01046-201ENST00000443719 C8orf58Q8NAV2 365 aa16.48■□□□□ 0.23
LINC01046-201ENST00000443719 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
LINC01046-201ENST00000443719 LAMB4A4D0S4 1761 aa16.48■□□□□ 0.23
LINC01046-201ENST00000443719 ZNF831Q5JPB2 1677 aa16.47■□□□□ 0.23
LINC01046-201ENST00000443719 A1BGP04217 495 aa16.47■□□□□ 0.23
LINC01046-201ENST00000443719 HOXB7P09629 217 aa16.47■□□□□ 0.23
LINC01046-201ENST00000443719 PIP4K2AP48426 406 aaPredicted RBP16.47■□□□□ 0.23
LINC01046-201ENST00000443719 R3HDM1Q15032 1099 aaKnown RBP16.47■□□□□ 0.23
LINC01046-201ENST00000443719 SLC15A2Q16348 729 aa16.47■□□□□ 0.23
LINC01046-201ENST00000443719 ZBTB1Q9Y2K1 713 aa16.47■□□□□ 0.23
LINC01046-201ENST00000443719 COL5A3P25940 1745 aaPredicted RBP16.46■□□□□ 0.23
LINC01046-201ENST00000443719 PSDA5PKW4 1024 aaPredicted RBP16.46■□□□□ 0.23
LINC01046-201ENST00000443719 MYL6BP14649 208 aa16.46■□□□□ 0.23
LINC01046-201ENST00000443719 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
LINC01046-201ENST00000443719 STK31Q9BXU1 1019 aa16.46■□□□□ 0.23
LINC01046-201ENST00000443719 CCDC30Q5VVM6 783 aa16.45■□□□□ 0.22
LINC01046-201ENST00000443719 TSPYL6Q8N831 410 aa16.45■□□□□ 0.22
LINC01046-201ENST00000443719 SOS1Q07889 1333 aaPredicted RBP16.45■□□□□ 0.22
LINC01046-201ENST00000443719 TCERG1O14776 1098 aaKnown RBP16.44■□□□□ 0.22
LINC01046-201ENST00000443719 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
LINC01046-201ENST00000443719 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
LINC01046-201ENST00000443719 AKT1S1Q96B36 256 aa16.44■□□□□ 0.22
LINC01046-201ENST00000443719 CICQ96RK0 1608 aaPredicted RBP16.44■□□□□ 0.22
LINC01046-201ENST00000443719 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.43■□□□□ 0.22
LINC01046-201ENST00000443719 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
LINC01046-201ENST00000443719 SSFA2P28290 1259 aa16.43■□□□□ 0.22
LINC01046-201ENST00000443719 RFC4P35249 363 aa16.43■□□□□ 0.22
LINC01046-201ENST00000443719 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
LINC01046-201ENST00000443719 SMIM5Q71RC9 77 aa16.43■□□□□ 0.22
LINC01046-201ENST00000443719 CHPF2Q9P2E5 772 aa16.43■□□□□ 0.22
LINC01046-201ENST00000443719 ERBB4Q15303 1308 aa16.43■□□□□ 0.22
LINC01046-201ENST00000443719 COL15A1P39059 1388 aa16.42■□□□□ 0.22
LINC01046-201ENST00000443719 A0A087WZG4 1122 aa16.42■□□□□ 0.22
LINC01046-201ENST00000443719 ANXA1P04083 346 aa16.42■□□□□ 0.22
LINC01046-201ENST00000443719 ZPR1O75312 459 aa16.41■□□□□ 0.22
LINC01046-201ENST00000443719 ADRA2BP18089 450 aa16.41■□□□□ 0.22
LINC01046-201ENST00000443719 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
LINC01046-201ENST00000443719 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
LINC01046-201ENST00000443719 KIF6Q6ZMV9 814 aa16.41■□□□□ 0.22
LINC01046-201ENST00000443719 DBF4Q9UBU7 674 aaPredicted RBP16.41■□□□□ 0.22
LINC01046-201ENST00000443719 MYH14Q7Z406 1995 aaKnown RBP16.4■□□□□ 0.22
LINC01046-201ENST00000443719 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC01046-201ENST00000443719 PNPLA7Q6ZV29 1317 aa16.4■□□□□ 0.22
LINC01046-201ENST00000443719 VAMP4O75379 141 aa16.39■□□□□ 0.21
LINC01046-201ENST00000443719 DZIP3Q86Y13 1208 aaKnown RBP16.39■□□□□ 0.21
LINC01046-201ENST00000443719 ARHGEF1Q92888 912 aaKnown RBP16.39■□□□□ 0.21
LINC01046-201ENST00000443719 HYPKQ9NX55 129 aa16.39■□□□□ 0.21
LINC01046-201ENST00000443719 TUBGCP6Q96RT7 1819 aa16.39■□□□□ 0.21
LINC01046-201ENST00000443719 UBR3Q6ZT12 1888 aa16.39■□□□□ 0.21
LINC01046-201ENST00000443719 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
LINC01046-201ENST00000443719 PROSER3Q2NL68 480 aa16.38■□□□□ 0.21
LINC01046-201ENST00000443719 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
LINC01046-201ENST00000443719 COL23A1Q86Y22 540 aaPredicted RBP16.38■□□□□ 0.21
LINC01046-201ENST00000443719 TRMT2AQ8IZ69 625 aaKnown RBP16.38■□□□□ 0.21
LINC01046-201ENST00000443719 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
LINC01046-201ENST00000443719 SMC4Q9NTJ3 1288 aa16.38■□□□□ 0.21
LINC01046-201ENST00000443719 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
LINC01046-201ENST00000443719 SLC4A2P04920 1241 aa16.37■□□□□ 0.21
LINC01046-201ENST00000443719 CT47B1P0C2W7 299 aaPredicted RBP16.37■□□□□ 0.21
LINC01046-201ENST00000443719 EIF5P55010 431 aaKnown RBP16.37■□□□□ 0.21
LINC01046-201ENST00000443719 MSL1Q68DK7 614 aa16.37■□□□□ 0.21
LINC01046-201ENST00000443719 AMIGO3Q86WK7 504 aa16.37■□□□□ 0.21
LINC01046-201ENST00000443719 XAGE3Q8WTP9 111 aa16.37■□□□□ 0.21
LINC01046-201ENST00000443719 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
LINC01046-201ENST00000443719 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
LINC01046-201ENST00000443719 ZBTB7AO95365 584 aa16.36■□□□□ 0.21
LINC01046-201ENST00000443719 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
LINC01046-201ENST00000443719 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
LINC01046-201ENST00000443719 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
LINC01046-201ENST00000443719 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
LINC01046-201ENST00000443719 ZBTB3Q9H5J0 574 aa16.35■□□□□ 0.21
LINC01046-201ENST00000443719 QSER1Q2KHR3 1735 aa16.34■□□□□ 0.21
LINC01046-201ENST00000443719 NPHP1O15259 732 aa16.34■□□□□ 0.21
LINC01046-201ENST00000443719 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
LINC01046-201ENST00000443719 TTLL7Q6ZT98 887 aa16.34■□□□□ 0.21
LINC01046-201ENST00000443719 ZNF428Q96B54 188 aa16.34■□□□□ 0.21
LINC01046-201ENST00000443719 NARFQ9UHQ1 456 aa16.34■□□□□ 0.21
LINC01046-201ENST00000443719 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
LINC01046-201ENST00000443719 PDIA6Q15084 440 aa16.33■□□□□ 0.2
LINC01046-201ENST00000443719 BICDL1Q6ZP65 573 aa16.33■□□□□ 0.2
LINC01046-201ENST00000443719 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
LINC01046-201ENST00000443719 PDGFDQ9GZP0 370 aaPredicted RBP16.33■□□□□ 0.2
LINC01046-201ENST00000443719 PHAXQ9H814 394 aaKnown RBP16.33■□□□□ 0.2
LINC01046-201ENST00000443719 ATF5Q9Y2D1 282 aaPredicted RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms