RNA–Protein interactions for RNA: ENST00000443206.2

TOM1-208, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-208ENST00000443206 NLGN2Q8NFZ4 835 aa17.32■□□□□ 0.36
TOM1-208ENST00000443206 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
TOM1-208ENST00000443206 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
TOM1-208ENST00000443206 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
TOM1-208ENST00000443206 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
TOM1-208ENST00000443206 PELP1Q8IZL8 1130 aaKnown RBP17.31■□□□□ 0.36
TOM1-208ENST00000443206 PNISRQ8TF01 805 aaKnown RBP17.31■□□□□ 0.36
TOM1-208ENST00000443206 SRP68Q9UHB9 627 aaKnown RBP17.31■□□□□ 0.36
TOM1-208ENST00000443206 RIPK4P57078 832 aa17.3■□□□□ 0.36
TOM1-208ENST00000443206 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
TOM1-208ENST00000443206 PARP3Q9Y6F1 533 aa17.3■□□□□ 0.36
TOM1-208ENST00000443206 COL15A1P39059 1388 aa17.29■□□□□ 0.36
TOM1-208ENST00000443206 CHD4Q14839 1912 aa17.29■□□□□ 0.36
TOM1-208ENST00000443206 A0A087WZG4 1122 aa17.28■□□□□ 0.36
TOM1-208ENST00000443206 SNRPA1P09661 255 aaKnown RBP17.28■□□□□ 0.36
TOM1-208ENST00000443206 TMPOP42166 694 aaKnown RBP17.28■□□□□ 0.36
TOM1-208ENST00000443206 LMOD3Q0VAK6 560 aa17.28■□□□□ 0.36
TOM1-208ENST00000443206 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
TOM1-208ENST00000443206 NARFQ9UHQ1 456 aa17.28■□□□□ 0.36
TOM1-208ENST00000443206 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
TOM1-208ENST00000443206 YY1P25490 414 aa17.27■□□□□ 0.36
TOM1-208ENST00000443206 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
TOM1-208ENST00000443206 FKBP8Q14318 412 aa17.27■□□□□ 0.36
TOM1-208ENST00000443206 CCDC146Q8IYE0 955 aa17.27■□□□□ 0.36
TOM1-208ENST00000443206 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
TOM1-208ENST00000443206 MIS18AQ9NYP9 233 aa17.27■□□□□ 0.36
TOM1-208ENST00000443206 ZNF330Q9Y3S2 320 aaPredicted RBP17.27■□□□□ 0.36
TOM1-208ENST00000443206 USP16Q9Y5T5 823 aa17.27■□□□□ 0.36
TOM1-208ENST00000443206 IL6STP40189 918 aaPredicted RBP17.26■□□□□ 0.35
TOM1-208ENST00000443206 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
TOM1-208ENST00000443206 GOLGB1Q14789 3259 aaKnown RBP17.25■□□□□ 0.35
TOM1-208ENST00000443206 A1BGP04217 495 aa17.25■□□□□ 0.35
TOM1-208ENST00000443206 NEUROD2Q15784 382 aa17.25■□□□□ 0.35
TOM1-208ENST00000443206 UTRNP46939 3433 aa17.24■□□□□ 0.35
TOM1-208ENST00000443206 GRIN3BO60391 1043 aa17.24■□□□□ 0.35
TOM1-208ENST00000443206 KIF13BQ9NQT8 1826 aa17.24■□□□□ 0.35
TOM1-208ENST00000443206 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
TOM1-208ENST00000443206 ANP32CO43423 234 aa17.23■□□□□ 0.35
TOM1-208ENST00000443206 TM4SF1P30408 202 aa17.23■□□□□ 0.35
TOM1-208ENST00000443206 TGFB2P61812 414 aa17.23■□□□□ 0.35
TOM1-208ENST00000443206 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
TOM1-208ENST00000443206 KDM3BQ7LBC6 1761 aa17.23■□□□□ 0.35
TOM1-208ENST00000443206 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
TOM1-208ENST00000443206 POLRMTO00411 1230 aaKnown RBP17.21■□□□□ 0.35
TOM1-208ENST00000443206 YBX3P16989 372 aaKnown RBP eCLIP17.21■□□□□ 0.35
TOM1-208ENST00000443206 EIF4A1P60842 406 aaKnown RBP17.21■□□□□ 0.35
TOM1-208ENST00000443206 DDR1Q08345 913 aa17.21■□□□□ 0.35
TOM1-208ENST00000443206 NFIXQ14938 502 aa17.21■□□□□ 0.35
TOM1-208ENST00000443206 BABAM1Q9NWV8 329 aa17.21■□□□□ 0.35
TOM1-208ENST00000443206 TSPYL4Q9UJ04 414 aa17.21■□□□□ 0.35
TOM1-208ENST00000443206 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
TOM1-208ENST00000443206 BCL2L12Q9HB09 334 aa17.2■□□□□ 0.34
TOM1-208ENST00000443206 C10orf71Q711Q0 1435 aa17.2■□□□□ 0.34
TOM1-208ENST00000443206 N4BP2Q86UW6 1770 aaPredicted RBP17.2■□□□□ 0.34
TOM1-208ENST00000443206 A0A0G2JLW4 131 aa17.19■□□□□ 0.34
TOM1-208ENST00000443206 PIP4K2AP48426 406 aaPredicted RBP17.19■□□□□ 0.34
TOM1-208ENST00000443206 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
TOM1-208ENST00000443206 DZIP3Q86Y13 1208 aaKnown RBP17.19■□□□□ 0.34
TOM1-208ENST00000443206 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
TOM1-208ENST00000443206 AFDNP55196 1824 aaKnown RBP17.19■□□□□ 0.34
TOM1-208ENST00000443206 SERPINB2P05120 415 aa17.18■□□□□ 0.34
TOM1-208ENST00000443206 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
TOM1-208ENST00000443206 TRIM35Q9UPQ4 493 aa17.17■□□□□ 0.34
TOM1-208ENST00000443206 PXDNLA1KZ92 1463 aa17.17■□□□□ 0.34
TOM1-208ENST00000443206 NBPF26B4DH59 902 aa17.16■□□□□ 0.34
TOM1-208ENST00000443206 CAMTA2O94983 1202 aa17.16■□□□□ 0.34
TOM1-208ENST00000443206 DPEP1P16444 411 aa17.16■□□□□ 0.34
TOM1-208ENST00000443206 TBC1D9BQ66K14 1250 aa17.16■□□□□ 0.34
TOM1-208ENST00000443206 NBPF10Q6P3W6 841 aaKnown RBP17.16■□□□□ 0.34
TOM1-208ENST00000443206 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
TOM1-208ENST00000443206 LAS1LQ9Y4W2 734 aaKnown RBP17.16■□□□□ 0.34
TOM1-208ENST00000443206 APAF1O14727 1248 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 CLEC4GQ6UXB4 293 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 SETDB2Q96T68 719 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 SCN7AQ01118 1682 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 KIAA1551Q9HCM1 1747 aa17.15■□□□□ 0.34
TOM1-208ENST00000443206 NGEFQ8N5V2 710 aa17.14■□□□□ 0.33
TOM1-208ENST00000443206 MRS2Q9HD23 443 aa17.14■□□□□ 0.33
TOM1-208ENST00000443206 PIM2Q9P1W9 311 aa17.14■□□□□ 0.33
TOM1-208ENST00000443206 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
TOM1-208ENST00000443206 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
TOM1-208ENST00000443206 BCORQ6W2J9 1755 aa17.13■□□□□ 0.33
TOM1-208ENST00000443206 CHL1O00533 1208 aa17.13■□□□□ 0.33
TOM1-208ENST00000443206 NPHP1O15259 732 aa17.13■□□□□ 0.33
TOM1-208ENST00000443206 CARMIL3Q8ND23 1372 aa17.13■□□□□ 0.33
TOM1-208ENST00000443206 BRCA1P38398 1863 aaKnown RBP17.12■□□□□ 0.33
TOM1-208ENST00000443206 MYL6BP14649 208 aa17.12■□□□□ 0.33
TOM1-208ENST00000443206 EIF2S2P20042 333 aaKnown RBP17.12■□□□□ 0.33
TOM1-208ENST00000443206 KCNA3P22001 575 aa17.12■□□□□ 0.33
TOM1-208ENST00000443206 CALD1Q05682 793 aaKnown RBP17.12■□□□□ 0.33
TOM1-208ENST00000443206 RGL2O15211 777 aa17.11■□□□□ 0.33
TOM1-208ENST00000443206 CHRNA5P30532 468 aa17.11■□□□□ 0.33
TOM1-208ENST00000443206 CFAP44Q96MT7 982 aa17.11■□□□□ 0.33
TOM1-208ENST00000443206 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
TOM1-208ENST00000443206 DALRD3Q5D0E6 543 aaKnown RBP17.1■□□□□ 0.33
TOM1-208ENST00000443206 KIF6Q6ZMV9 814 aa17.1■□□□□ 0.33
TOM1-208ENST00000443206 H0YIN7 160 aa17.09■□□□□ 0.33
TOM1-208ENST00000443206 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms