RNA–Protein interactions for RNA: ENST00000442677.3

CDH23-207, Transcript of cadherin related 23, humanhuman

TSL 5

Gene CDH23, Length 7,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-207ENST00000442677 PPP1R14CQ8TAE6 165 aa18.12■□□□□ 0.49
CDH23-207ENST00000442677 SMG6Q86US8 1419 aaKnown RBP18.11■□□□□ 0.49
CDH23-207ENST00000442677 PAXBP1Q9Y5B6 917 aa18.11■□□□□ 0.49
CDH23-207ENST00000442677 NEMFO60524 1076 aa18.11■□□□□ 0.49
CDH23-207ENST00000442677 STX1AQ16623 288 aa18.11■□□□□ 0.49
CDH23-207ENST00000442677 SCLT1Q96NL6 688 aa18.11■□□□□ 0.49
CDH23-207ENST00000442677 IGSF3O75054 1194 aa18.11■□□□□ 0.49
CDH23-207ENST00000442677 SEC63Q9UGP8 760 aaKnown RBP18.1■□□□□ 0.49
CDH23-207ENST00000442677 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 TTC31Q49AM3 519 aaPredicted RBP18.1■□□□□ 0.49
CDH23-207ENST00000442677 MINDY4BA8MYZ0 360 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 CTAGE5O15320 804 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 MYO1BO43795 1136 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 CCT2P78371 535 aaKnown RBP18.1■□□□□ 0.49
CDH23-207ENST00000442677 AIDAQ96BJ3 306 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 FGFR1OPO95684 399 aaKnown RBP18.1■□□□□ 0.49
CDH23-207ENST00000442677 FERP16591 822 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 ATRIPQ8WXE1 791 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 PPP1R1BQ9UD71 204 aaPredicted RBP18.1■□□□□ 0.49
CDH23-207ENST00000442677 TRIM21P19474 475 aaKnown RBP18.1■□□□□ 0.49
CDH23-207ENST00000442677 TBC1D2Q9BYX2 928 aa18.1■□□□□ 0.49
CDH23-207ENST00000442677 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
CDH23-207ENST00000442677 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.09■□□□□ 0.49
CDH23-207ENST00000442677 V9GYY5 206 aaPredicted RBP18.09■□□□□ 0.49
CDH23-207ENST00000442677 ATF3P18847 181 aa18.09■□□□□ 0.49
CDH23-207ENST00000442677 NAP1L3Q99457 506 aaPredicted RBP18.09■□□□□ 0.49
CDH23-207ENST00000442677 RRBP1Q9P2E9 1410 aaKnown RBP18.09■□□□□ 0.49
CDH23-207ENST00000442677 CABP4P57796 275 aa18.09■□□□□ 0.49
CDH23-207ENST00000442677 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
CDH23-207ENST00000442677 IVLP07476 585 aa18.09■□□□□ 0.49
CDH23-207ENST00000442677 PRIMPOLQ96LW4 560 aa18.08■□□□□ 0.49
CDH23-207ENST00000442677 TERF1P54274 439 aa18.08■□□□□ 0.48
CDH23-207ENST00000442677 PANK2Q9BZ23 570 aa18.08■□□□□ 0.48
CDH23-207ENST00000442677 ZSCAN23Q3MJ62 389 aa18.08■□□□□ 0.48
CDH23-207ENST00000442677 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
CDH23-207ENST00000442677 BOLA2Q9H3K6 86 aa18.07■□□□□ 0.48
CDH23-207ENST00000442677 U3KPZ7 1027 aaPredicted RBP18.07■□□□□ 0.48
CDH23-207ENST00000442677 ARFGAP3Q9NP61 516 aa18.07■□□□□ 0.48
CDH23-207ENST00000442677 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
CDH23-207ENST00000442677 PDIA4P13667 645 aaKnown RBP18.07■□□□□ 0.48
CDH23-207ENST00000442677 WDR63Q8IWG1 891 aa18.07■□□□□ 0.48
CDH23-207ENST00000442677 C10orf67Q8IYJ2 551 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 CCDC155Q8N6L0 562 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 PHF23Q9BUL5 403 aaPredicted RBP18.06■□□□□ 0.48
CDH23-207ENST00000442677 GIMAP6Q6P9H5 292 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 FERMT2Q96AC1 680 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 CEP126Q9P2H0 1117 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 KIF4AO95239 1232 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 CAPN2P17655 700 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 TCERG1LQ5VWI1 586 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 GJB2P29033 226 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 MCM5P33992 734 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 IKBKGQ9Y6K9 419 aa18.06■□□□□ 0.48
CDH23-207ENST00000442677 MMRN2Q9H8L6 949 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 HSP90AA4PQ58FG1 418 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 PPFIA3O75145 1194 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 CCDC150Q8NCX0 1101 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 GOLGA6L9A6NEM1 432 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 ZNF165P49910 485 aa18.05■□□□□ 0.48
CDH23-207ENST00000442677 SSRP1Q08945 709 aaKnown RBP18.05■□□□□ 0.48
CDH23-207ENST00000442677 NSRP1Q9H0G5 558 aaKnown RBP18.05■□□□□ 0.48
CDH23-207ENST00000442677 PRC1O43663 620 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 VPS18Q9P253 973 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 TRMT1LQ7Z2T5 733 aaKnown RBP18.04■□□□□ 0.48
CDH23-207ENST00000442677 DDX19AQ9NUU7 478 aaKnown RBP18.04■□□□□ 0.48
CDH23-207ENST00000442677 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
CDH23-207ENST00000442677 MX1P20591 662 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 CCDC40Q4G0X9 1142 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 CKAP4Q07065 602 aaKnown RBP18.04■□□□□ 0.48
CDH23-207ENST00000442677 DNAJC21Q5F1R6 531 aaKnown RBP18.04■□□□□ 0.48
CDH23-207ENST00000442677 TSNARE1Q96NA8 513 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 SELENOSQ9BQE4 189 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 CEP83Q9Y592 693 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 DNAI1Q9UI46 699 aa18.04■□□□□ 0.48
CDH23-207ENST00000442677 TNIP1Q15025 636 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 CCDC121Q6ZUS5 278 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 PUF60Q9UHX1 559 aaKnown RBP18.03■□□□□ 0.48
CDH23-207ENST00000442677 OTUD6BQ8N6M0 293 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 SH2B1Q9NRF2 756 aaPredicted RBP18.03■□□□□ 0.48
CDH23-207ENST00000442677 CCDC171Q6TFL3 1326 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 BTBD11A6QL63 1104 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 NOLC1Q14978 699 aaKnown RBP eCLIP18.03■□□□□ 0.48
CDH23-207ENST00000442677 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 POLR3DP05423 398 aaPredicted RBP18.03■□□□□ 0.48
CDH23-207ENST00000442677 SEPT6Q14141 434 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 KIAA0753Q2KHM9 967 aa18.03■□□□□ 0.48
CDH23-207ENST00000442677 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.48
CDH23-207ENST00000442677 BAG4O95429 457 aaKnown RBP18.02■□□□□ 0.48
CDH23-207ENST00000442677 NLRP5P59047 1200 aa18.02■□□□□ 0.48
CDH23-207ENST00000442677 ANKS4BQ8N8V4 417 aa18.02■□□□□ 0.48
CDH23-207ENST00000442677 PTPRGP23470 1445 aa18.02■□□□□ 0.48
CDH23-207ENST00000442677 TATP17735 454 aaPredicted RBP18.02■□□□□ 0.48
CDH23-207ENST00000442677 LIMCH1Q9UPQ0 1083 aa18.02■□□□□ 0.47
CDH23-207ENST00000442677 SLC12A7Q9Y666 1083 aa18.02■□□□□ 0.47
CDH23-207ENST00000442677 ZWINTO95229 277 aa18.02■□□□□ 0.47
CDH23-207ENST00000442677 MKNK2Q9HBH9 465 aa18.02■□□□□ 0.47
CDH23-207ENST00000442677 WIZO95785 1651 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms