RNA–Protein interactions for RNA: ENST00000442667.2

CDCA4P1-201, Transcript of cell division cycle associated 4 pseudogene 1, humanhuman

BASIC

Gene CDCA4P1, Length 624 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P1-201ENST00000442667 AK7Q96M32 723 aa13.19□□□□□ -0.3
CDCA4P1-201ENST00000442667 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
CDCA4P1-201ENST00000442667 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
CDCA4P1-201ENST00000442667 SIPA1L3O60292 1781 aaPredicted RBP13.19□□□□□ -0.3
CDCA4P1-201ENST00000442667 PAPPAQ13219 1627 aa13.18□□□□□ -0.3
CDCA4P1-201ENST00000442667 GNPATO15228 680 aa13.18□□□□□ -0.3
CDCA4P1-201ENST00000442667 VAMP4O75379 141 aa13.18□□□□□ -0.3
CDCA4P1-201ENST00000442667 RPS6KA4O75676 772 aa13.18□□□□□ -0.3
CDCA4P1-201ENST00000442667 TFCP2L1Q9NZI6 479 aa13.18□□□□□ -0.3
CDCA4P1-201ENST00000442667 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 PIP4K2AP48426 406 aaPredicted RBP13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 TWISTNBQ3B726 338 aaPredicted RBP13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 NBPF10Q6P3W6 841 aaKnown RBP13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 NBPF15Q8N660 670 aa13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 NECTIN2Q92692 538 aa13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
CDCA4P1-201ENST00000442667 SOS1Q07889 1333 aaPredicted RBP13.16□□□□□ -0.3
CDCA4P1-201ENST00000442667 R3HDM1Q15032 1099 aaKnown RBP13.16□□□□□ -0.3
CDCA4P1-201ENST00000442667 HDGFL1Q5TGJ6 251 aa13.16□□□□□ -0.3
CDCA4P1-201ENST00000442667 LY75O60449 1722 aa13.16□□□□□ -0.3
CDCA4P1-201ENST00000442667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
CDCA4P1-201ENST00000442667 IL6STP40189 918 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P1-201ENST00000442667 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
CDCA4P1-201ENST00000442667 PDIA6Q15084 440 aa13.15□□□□□ -0.3
CDCA4P1-201ENST00000442667 TRAPPC3LQ5T215 181 aa13.15□□□□□ -0.3
CDCA4P1-201ENST00000442667 COL23A1Q86Y22 540 aaPredicted RBP13.15□□□□□ -0.3
CDCA4P1-201ENST00000442667 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
CDCA4P1-201ENST00000442667 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
CDCA4P1-201ENST00000442667 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 PNPLA7Q6ZV29 1317 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 PSDA5PKW4 1024 aaPredicted RBP13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 PHF14O94880 888 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 ANXA1P04083 346 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 SSFA2P28290 1259 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 PROSER3Q2NL68 480 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 FLAD1Q8NFF5 587 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 CHMP4AQ9BY43 222 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 KDM3BQ7LBC6 1761 aa13.14□□□□□ -0.31
CDCA4P1-201ENST00000442667 UBR2Q8IWV8 1755 aa13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 ADRA2BP18089 450 aa13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 PDGFDQ9GZP0 370 aaPredicted RBP13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 CHPF2Q9P2E5 772 aa13.13□□□□□ -0.31
CDCA4P1-201ENST00000442667 MYL6BP14649 208 aa13.12□□□□□ -0.31
CDCA4P1-201ENST00000442667 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
CDCA4P1-201ENST00000442667 ZNF330Q9Y3S2 320 aaPredicted RBP13.12□□□□□ -0.31
CDCA4P1-201ENST00000442667 ZNF831Q5JPB2 1677 aa13.12□□□□□ -0.31
CDCA4P1-201ENST00000442667 RREB1Q92766 1687 aa13.12□□□□□ -0.31
CDCA4P1-201ENST00000442667 VIRMAQ69YN4 1812 aaKnown RBP13.11□□□□□ -0.31
CDCA4P1-201ENST00000442667 A0A087WZG4 1122 aa13.11□□□□□ -0.31
CDCA4P1-201ENST00000442667 MSH5O43196 834 aa13.11□□□□□ -0.31
CDCA4P1-201ENST00000442667 CT47B1P0C2W7 299 aaPredicted RBP13.11□□□□□ -0.31
CDCA4P1-201ENST00000442667 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
CDCA4P1-201ENST00000442667 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 TJP1Q07157 1748 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 C5P01031 1676 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 RFC4P35249 363 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 TTLL7Q6ZT98 887 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 COPS6Q7L5N1 327 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 HYPKQ9NX55 129 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 NUP188Q5SRE5 1749 aa13.1□□□□□ -0.31
CDCA4P1-201ENST00000442667 COL15A1P39059 1388 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 SSH1Q8WYL5 1049 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 ARXQ96QS3 562 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 NARFQ9UHQ1 456 aa13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
CDCA4P1-201ENST00000442667 ZPR1O75312 459 aa13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 AIMP1Q12904 312 aaKnown RBP13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 G2E3Q7L622 706 aa13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 PHAXQ9H814 394 aaKnown RBP13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 USP42Q9H9J4 1324 aaKnown RBP13.08□□□□□ -0.32
CDCA4P1-201ENST00000442667 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
CDCA4P1-201ENST00000442667 GYS1P13807 737 aa13.07□□□□□ -0.32
CDCA4P1-201ENST00000442667 RARSP54136 660 aaKnown RBP13.07□□□□□ -0.32
CDCA4P1-201ENST00000442667 MRPL50Q8N5N7 158 aaKnown RBP13.07□□□□□ -0.32
CDCA4P1-201ENST00000442667 BCL2L12Q9HB09 334 aa13.07□□□□□ -0.32
CDCA4P1-201ENST00000442667 MYH14Q7Z406 1995 aaKnown RBP13.07□□□□□ -0.32
CDCA4P1-201ENST00000442667 ERVV-1B6SEH8 477 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 FKBP8Q14318 412 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 HLFQ16534 295 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 ALDH1L2Q3SY69 923 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 BCL2L13Q9BXK5 485 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
CDCA4P1-201ENST00000442667 COL5A3P25940 1745 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms