RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 YY1P25490 414 aa21.44■■□□□ 1.02
RBM39-215ENST00000442447 DLG5Q8TDM6 1919 aa21.43■■□□□ 1.02
RBM39-215ENST00000442447 CANXP27824 592 aaKnown RBP21.43■■□□□ 1.02
RBM39-215ENST00000442447 COL15A1P39059 1388 aa21.43■■□□□ 1.02
RBM39-215ENST00000442447 FKBP8Q14318 412 aa21.42■■□□□ 1.02
RBM39-215ENST00000442447 TEX13AQ9BXU3 409 aaPredicted RBP21.42■■□□□ 1.02
RBM39-215ENST00000442447 UTRNP46939 3433 aa21.42■■□□□ 1.02
RBM39-215ENST00000442447 ZPR1O75312 459 aa21.41■■□□□ 1.02
RBM39-215ENST00000442447 TAF7Q15545 349 aaPredicted RBP21.41■■□□□ 1.02
RBM39-215ENST00000442447 USPL1Q5W0Q7 1092 aa21.41■■□□□ 1.02
RBM39-215ENST00000442447 THUMPD2Q9BTF0 503 aaKnown RBP21.41■■□□□ 1.02
RBM39-215ENST00000442447 PARP3Q9Y6F1 533 aa21.4■■□□□ 1.02
RBM39-215ENST00000442447 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.02
RBM39-215ENST00000442447 YBX3P16989 372 aaKnown RBP eCLIP21.39■■□□□ 1.01
RBM39-215ENST00000442447 WDR43Q15061 677 aaKnown RBP eCLIP21.39■■□□□ 1.01
RBM39-215ENST00000442447 MIS18AQ9NYP9 233 aa21.39■■□□□ 1.01
RBM39-215ENST00000442447 PRAMEF22A3QJZ6 481 aa21.38■■□□□ 1.01
RBM39-215ENST00000442447 EIF5P55010 431 aaKnown RBP21.38■■□□□ 1.01
RBM39-215ENST00000442447 CCDC146Q8IYE0 955 aa21.38■■□□□ 1.01
RBM39-215ENST00000442447 NARFQ9UHQ1 456 aa21.38■■□□□ 1.01
RBM39-215ENST00000442447 C10orf71Q711Q0 1435 aa21.38■■□□□ 1.01
RBM39-215ENST00000442447 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
RBM39-215ENST00000442447 A1BGP04217 495 aa21.37■■□□□ 1.01
RBM39-215ENST00000442447 DDR1Q08345 913 aa21.37■■□□□ 1.01
RBM39-215ENST00000442447 ZNF330Q9Y3S2 320 aaPredicted RBP21.37■■□□□ 1.01
RBM39-215ENST00000442447 SNRPA1P09661 255 aaKnown RBP21.36■■□□□ 1.01
RBM39-215ENST00000442447 RIPK4P57078 832 aa21.36■■□□□ 1.01
RBM39-215ENST00000442447 WWC3Q9ULE0 1092 aa21.36■■□□□ 1.01
RBM39-215ENST00000442447 USP16Q9Y5T5 823 aa21.36■■□□□ 1.01
RBM39-215ENST00000442447 TMPOP42166 694 aaKnown RBP21.35■■□□□ 1.01
RBM39-215ENST00000442447 BCL2L12Q9HB09 334 aa21.35■■□□□ 1.01
RBM39-215ENST00000442447 KIF13BQ9NQT8 1826 aa21.34■■□□□ 1.01
RBM39-215ENST00000442447 PXDNLA1KZ92 1463 aa21.34■■□□□ 1.01
RBM39-215ENST00000442447 A0A087WZG4 1122 aa21.34■■□□□ 1.01
RBM39-215ENST00000442447 TM4SF1P30408 202 aa21.34■■□□□ 1.01
RBM39-215ENST00000442447 IL6STP40189 918 aaPredicted RBP21.34■■□□□ 1.01
RBM39-215ENST00000442447 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
RBM39-215ENST00000442447 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
RBM39-215ENST00000442447 RRP7AQ9Y3A4 280 aaKnown RBP21.34■■□□□ 1.01
RBM39-215ENST00000442447 KDM3BQ7LBC6 1761 aa21.33■■□□□ 1.01
RBM39-215ENST00000442447 POLRMTO00411 1230 aaKnown RBP21.33■■□□□ 1.01
RBM39-215ENST00000442447 PIP4K2AP48426 406 aaPredicted RBP21.33■■□□□ 1.01
RBM39-215ENST00000442447 GRIN3BO60391 1043 aa21.32■■□□□ 1
RBM39-215ENST00000442447 NFIXQ14938 502 aa21.32■■□□□ 1
RBM39-215ENST00000442447 RUNDC1Q96C34 613 aa21.32■■□□□ 1
RBM39-215ENST00000442447 KIAA1551Q9HCM1 1747 aa21.32■■□□□ 1
RBM39-215ENST00000442447 TGFB2P61812 414 aa21.31■■□□□ 1
RBM39-215ENST00000442447 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
RBM39-215ENST00000442447 NEUROD2Q15784 382 aa21.31■■□□□ 1
RBM39-215ENST00000442447 NPM2Q86SE8 214 aaKnown RBP21.31■■□□□ 1
RBM39-215ENST00000442447 TBC1D2BQ9UPU7 963 aa21.31■■□□□ 1
RBM39-215ENST00000442447 CHD4Q14839 1912 aa21.31■■□□□ 1
RBM39-215ENST00000442447 A0A0G2JLW4 131 aa21.3■■□□□ 1
RBM39-215ENST00000442447 SCN7AQ01118 1682 aa21.3■■□□□ 1
RBM39-215ENST00000442447 N4BP2Q86UW6 1770 aaPredicted RBP21.3■■□□□ 1
RBM39-215ENST00000442447 DPEP1P16444 411 aa21.29■■□□□ 1
RBM39-215ENST00000442447 EIF4A1P60842 406 aaKnown RBP21.29■■□□□ 1
RBM39-215ENST00000442447 BICDL1Q6ZP65 573 aa21.28■■□□□ 1
RBM39-215ENST00000442447 TSPYL4Q9UJ04 414 aa21.28■■□□□ 1
RBM39-215ENST00000442447 LAMB4A4D0S4 1761 aa21.28■■□□□ 1
RBM39-215ENST00000442447 NBPF26B4DH59 902 aa21.27■■□□□ 1
RBM39-215ENST00000442447 GIGYF1O75420 1035 aaPredicted RBP21.27■■□□□ 1
RBM39-215ENST00000442447 CAMTA2O94983 1202 aa21.27■■□□□ 1
RBM39-215ENST00000442447 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
RBM39-215ENST00000442447 NBPF10Q6P3W6 841 aaKnown RBP21.27■■□□□ 1
RBM39-215ENST00000442447 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
RBM39-215ENST00000442447 NBPF15Q8N660 670 aa21.27■■□□□ 1
RBM39-215ENST00000442447 SERPINB2P05120 415 aa21.26■□□□□ 0.99
RBM39-215ENST00000442447 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
RBM39-215ENST00000442447 CCDC184Q52MB2 194 aa21.25■□□□□ 0.99
RBM39-215ENST00000442447 TRIM35Q9UPQ4 493 aa21.25■□□□□ 0.99
RBM39-215ENST00000442447 NRXN2Q9P2S2 1712 aa21.24■□□□□ 0.99
RBM39-215ENST00000442447 BCORQ6W2J9 1755 aa21.24■□□□□ 0.99
RBM39-215ENST00000442447 BCS1LQ9Y276 419 aa21.24■□□□□ 0.99
RBM39-215ENST00000442447 KCNA3P22001 575 aa21.23■□□□□ 0.99
RBM39-215ENST00000442447 CHRNA5P30532 468 aa21.23■□□□□ 0.99
RBM39-215ENST00000442447 ZNF784Q8NCA9 323 aaPredicted RBP21.23■□□□□ 0.99
RBM39-215ENST00000442447 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
RBM39-215ENST00000442447 CARMIL3Q8ND23 1372 aa21.22■□□□□ 0.99
RBM39-215ENST00000442447 ANP32CO43423 234 aa21.21■□□□□ 0.99
RBM39-215ENST00000442447 BRCA1P38398 1863 aaKnown RBP21.2■□□□□ 0.98
RBM39-215ENST00000442447 APAF1O14727 1248 aa21.2■□□□□ 0.98
RBM39-215ENST00000442447 SETDB2Q96T68 719 aa21.2■□□□□ 0.98
RBM39-215ENST00000442447 PIM2Q9P1W9 311 aa21.2■□□□□ 0.98
RBM39-215ENST00000442447 LAS1LQ9Y4W2 734 aaKnown RBP21.2■□□□□ 0.98
RBM39-215ENST00000442447 NGEFQ8N5V2 710 aa21.19■□□□□ 0.98
RBM39-215ENST00000442447 ZNF652Q9Y2D9 606 aa21.19■□□□□ 0.98
RBM39-215ENST00000442447 MYL6BP14649 208 aa21.18■□□□□ 0.98
RBM39-215ENST00000442447 CHL1O00533 1208 aa21.17■□□□□ 0.98
RBM39-215ENST00000442447 DALRD3Q5D0E6 543 aaKnown RBP21.17■□□□□ 0.98
RBM39-215ENST00000442447 PRR5LQ6MZQ0 368 aa21.17■□□□□ 0.98
RBM39-215ENST00000442447 CLEC4GQ6UXB4 293 aa21.17■□□□□ 0.98
RBM39-215ENST00000442447 CCDC24Q8N4L8 307 aa21.17■□□□□ 0.98
RBM39-215ENST00000442447 EIF2S2P20042 333 aaKnown RBP21.16■□□□□ 0.98
RBM39-215ENST00000442447 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
RBM39-215ENST00000442447 MRS2Q9HD23 443 aa21.16■□□□□ 0.98
RBM39-215ENST00000442447 ERBB4Q15303 1308 aa21.15■□□□□ 0.98
RBM39-215ENST00000442447 NPHP1O15259 732 aa21.15■□□□□ 0.98
RBM39-215ENST00000442447 HLFQ16534 295 aa21.15■□□□□ 0.98
RBM39-215ENST00000442447 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms