RNA–Protein interactions for RNA: ENST00000442328.1

SYNJ2-IT1-201, SYNJ2 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SYNJ2-IT1, Length 599 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2-IT1-201ENST00000442328 RARSP54136 660 aaKnown RBP9.69□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 KRT24Q2M2I5 525 aa9.69□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 TWISTNBQ3B726 338 aaPredicted RBP9.69□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 BARGINQ6ZT62 677 aa9.69□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 PLIN1O60240 522 aa9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 CABP4P57796 275 aa9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 DDB1Q16531 1140 aa9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 NFATC2IPQ8NCF5 419 aa9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 BCL2L13Q9BXK5 485 aa9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 SLC52A2Q9HAB3 445 aa9.68□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 KCNQ3O43525 872 aa9.67□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.67□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 SCN11AQ9UI33 1791 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 SHANK3Q9BYB0 1731 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 A0A0G2JS52 829 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 ERVV-2B6SEH9 535 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 CANXP27824 592 aaKnown RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 EIF4A1P60842 406 aaKnown RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 MYT1Q01538 1121 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 ALDH1L2Q3SY69 923 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 ZNF772Q68DY9 489 aaPredicted RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 FRAT1Q92837 279 aaPredicted RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 ZNF428Q96B54 188 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 GJD4Q96KN9 370 aaPredicted RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 SMC4Q9NTJ3 1288 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 TRPC5Q9UL62 973 aaPredicted RBP9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 WNK3Q9BYP7 1800 aa9.66□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 TNS2Q63HR2 1409 aa9.65□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.65□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 QTRT2Q9H974 415 aaKnown RBP9.65□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 VIRMAQ69YN4 1812 aaKnown RBP9.65□□□□□ -0.86
SYNJ2-IT1-201ENST00000442328 ZNF790Q6PG37 636 aa9.64□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 MRPL50Q8N5N7 158 aaKnown RBP9.64□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 MRC1P22897 1456 aa9.64□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ATRNO75882 1429 aa9.64□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 LRP5O75197 1615 aa9.64□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 SIPA1L3O60292 1781 aaPredicted RBP9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 KDM3BQ7LBC6 1761 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 RXRBP28702 533 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 C20orf194Q5TEA3 1177 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ZKSCAN2Q63HK3 967 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 TTC5Q8N0Z6 440 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 EFCAB3Q8N7B9 438 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 MFRPQ9BY79 579 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 TMOD3Q9NYL9 352 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 NOB1Q9ULX3 412 aaKnown RBP9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 GLI3P10071 1580 aa9.63□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 SOS1Q07889 1333 aaPredicted RBP9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 YY1P25490 414 aa9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 CLCN6P51797 869 aa9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 NECTIN2Q92692 538 aa9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 TMEM106CQ9BVX2 250 aa9.62□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 KIF16BQ96L93 1317 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 HAX1O00165 279 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 IPO8O15397 1037 aaKnown RBP9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ONECUT3O60422 494 aaPredicted RBP9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 HOXB7P09629 217 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 EIF2S2P20042 333 aaKnown RBP9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 PRIM1P49642 420 aaKnown RBP9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 PDE3AQ14432 1141 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 HDGFL1Q5TGJ6 251 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 CCDC30Q5VVM6 783 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 SEPT12Q8IYM1 358 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 EXOC6Q8TAG9 804 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 PIGBQ92521 554 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 CLUAP1Q96AJ1 413 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ACSBG1Q96GR2 724 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 MS4A3Q96HJ5 214 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ZNF496Q96IT1 587 aaPredicted RBP9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 FMNL2Q96PY5 1086 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 CRBNQ96SW2 442 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 STK31Q9BXU1 1019 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 TNNQ9UQP3 1299 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 TOGARAM1Q9Y4F4 1720 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 HEG1Q9ULI3 1381 aa9.61□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 PRAMEF22A3QJZ6 481 aa9.6□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ERICH6BQ5W0A0 696 aa9.6□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 PANK1Q8TE04 598 aa9.6□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 CHMP4AQ9BY43 222 aa9.6□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 THSD7AQ9UPZ6 1657 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 SNRPA1P09661 255 aaKnown RBP9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 MS4A1P11836 297 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 TRIM27P14373 513 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ATF7IPQ6VMQ6 1270 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 G2E3Q7L622 706 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 FTSJ3Q8IY81 847 aaKnown RBP9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 DZIP1LQ8IYY4 767 aaKnown RBP9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ARHGAP45Q92619 1136 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
SYNJ2-IT1-201ENST00000442328 ASAP1Q9ULH1 1129 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms