RNA–Protein interactions for RNA: ENST00000441796.1

CRAT-204, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-204ENST00000441796 KLHL34Q8N239 644 aa30.19■■■□□ 2.42
CRAT-204ENST00000441796 USP42Q9H9J4 1324 aaKnown RBP30.19■■■□□ 2.42
CRAT-204ENST00000441796 LMOD3Q0VAK6 560 aa30.17■■■□□ 2.42
CRAT-204ENST00000441796 CCDC146Q8IYE0 955 aa30.17■■■□□ 2.42
CRAT-204ENST00000441796 CD2APQ9Y5K6 639 aa30.17■■■□□ 2.42
CRAT-204ENST00000441796 MMP10P09238 476 aa30.16■■■□□ 2.42
CRAT-204ENST00000441796 THUMPD2Q9BTF0 503 aaKnown RBP30.16■■■□□ 2.42
CRAT-204ENST00000441796 SNRPA1P09661 255 aaKnown RBP30.15■■■□□ 2.42
CRAT-204ENST00000441796 SRP68Q9UHB9 627 aaKnown RBP30.15■■■□□ 2.42
CRAT-204ENST00000441796 COL15A1P39059 1388 aa30.15■■■□□ 2.42
CRAT-204ENST00000441796 ANP32CO43423 234 aa30.14■■■□□ 2.42
CRAT-204ENST00000441796 CANXP27824 592 aaKnown RBP30.14■■■□□ 2.42
CRAT-204ENST00000441796 EIF5P55010 431 aaKnown RBP30.14■■■□□ 2.42
CRAT-204ENST00000441796 MIS18AQ9NYP9 233 aa30.14■■■□□ 2.42
CRAT-204ENST00000441796 NLGN2Q8NFZ4 835 aa30.13■■■□□ 2.41
CRAT-204ENST00000441796 NARFQ9UHQ1 456 aa30.13■■■□□ 2.41
CRAT-204ENST00000441796 ZPR1O75312 459 aa30.12■■■□□ 2.41
CRAT-204ENST00000441796 USP16Q9Y5T5 823 aa30.12■■■□□ 2.41
CRAT-204ENST00000441796 A0A087WZG4 1122 aa30.11■■■□□ 2.41
CRAT-204ENST00000441796 IL6STP40189 918 aaPredicted RBP30.11■■■□□ 2.41
CRAT-204ENST00000441796 A1BGP04217 495 aa30.1■■■□□ 2.41
CRAT-204ENST00000441796 FKBP8Q14318 412 aa30.1■■■□□ 2.41
CRAT-204ENST00000441796 RRP7AQ9Y3A4 280 aaKnown RBP30.1■■■□□ 2.41
CRAT-204ENST00000441796 DLG5Q8TDM6 1919 aa30.1■■■□□ 2.41
CRAT-204ENST00000441796 C4AP0C0L4 1744 aa30.09■■■□□ 2.41
CRAT-204ENST00000441796 USPL1Q5W0Q7 1092 aa30.09■■■□□ 2.41
CRAT-204ENST00000441796 BABAM1Q9NWV8 329 aa30.09■■■□□ 2.41
CRAT-204ENST00000441796 PRAMEF22A3QJZ6 481 aa30.08■■■□□ 2.41
CRAT-204ENST00000441796 NEUROD2Q15784 382 aa30.08■■■□□ 2.41
CRAT-204ENST00000441796 CCDC184Q52MB2 194 aa30.08■■■□□ 2.41
CRAT-204ENST00000441796 PARP3Q9Y6F1 533 aa30.08■■■□□ 2.41
CRAT-204ENST00000441796 EIF4A1P60842 406 aaKnown RBP30.07■■■□□ 2.4
CRAT-204ENST00000441796 TM4SF1P30408 202 aa30.06■■■□□ 2.4
CRAT-204ENST00000441796 TRIM35Q9UPQ4 493 aa30.06■■■□□ 2.4
CRAT-204ENST00000441796 GIGYF1O75420 1035 aaPredicted RBP30.04■■■□□ 2.4
CRAT-204ENST00000441796 BCL2L12Q9HB09 334 aa30.04■■■□□ 2.4
CRAT-204ENST00000441796 TSPYL4Q9UJ04 414 aa30.04■■■□□ 2.4
CRAT-204ENST00000441796 NPM2Q86SE8 214 aaKnown RBP30.03■■■□□ 2.4
CRAT-204ENST00000441796 GPR162Q16538 588 aa30.02■■■□□ 2.4
CRAT-204ENST00000441796 DDR1Q08345 913 aa30.01■■■□□ 2.39
CRAT-204ENST00000441796 ZNF330Q9Y3S2 320 aaPredicted RBP30.01■■■□□ 2.39
CRAT-204ENST00000441796 POLRMTO00411 1230 aaKnown RBP30■■■□□ 2.39
CRAT-204ENST00000441796 KDM3BQ7LBC6 1761 aa30■■■□□ 2.39
CRAT-204ENST00000441796 C10orf71Q711Q0 1435 aa29.99■■■□□ 2.39
CRAT-204ENST00000441796 APAF1O14727 1248 aa29.99■■■□□ 2.39
CRAT-204ENST00000441796 TGFB2P61812 414 aa29.99■■■□□ 2.39
CRAT-204ENST00000441796 NFIXQ14938 502 aa29.99■■■□□ 2.39
CRAT-204ENST00000441796 MRS2Q9HD23 443 aa29.99■■■□□ 2.39
CRAT-204ENST00000441796 TBC1D2BQ9UPU7 963 aa29.99■■■□□ 2.39
CRAT-204ENST00000441796 NBPF26B4DH59 902 aa29.98■■■□□ 2.39
CRAT-204ENST00000441796 CHL1O00533 1208 aa29.98■■■□□ 2.39
CRAT-204ENST00000441796 NBPF10Q6P3W6 841 aaKnown RBP29.98■■■□□ 2.39
CRAT-204ENST00000441796 NBPF15Q8N660 670 aa29.98■■■□□ 2.39
CRAT-204ENST00000441796 PIP4K2AP48426 406 aaPredicted RBP29.97■■■□□ 2.39
CRAT-204ENST00000441796 DZIP3Q86Y13 1208 aaKnown RBP29.96■■■□□ 2.39
CRAT-204ENST00000441796 CAMTA2O94983 1202 aa29.95■■■□□ 2.39
CRAT-204ENST00000441796 PELP1Q8IZL8 1130 aaKnown RBP29.95■■■□□ 2.39
CRAT-204ENST00000441796 GRIN3BO60391 1043 aa29.93■■■□□ 2.38
CRAT-204ENST00000441796 YBX3P16989 372 aaKnown RBP eCLIP29.93■■■□□ 2.38
CRAT-204ENST00000441796 RGL2O15211 777 aa29.92■■■□□ 2.38
CRAT-204ENST00000441796 PXDNLA1KZ92 1463 aa29.92■■■□□ 2.38
CRAT-204ENST00000441796 SERPINB2P05120 415 aa29.91■■■□□ 2.38
CRAT-204ENST00000441796 TBC1D9BQ66K14 1250 aa29.91■■■□□ 2.38
CRAT-204ENST00000441796 CLEC4GQ6UXB4 293 aa29.91■■■□□ 2.38
CRAT-204ENST00000441796 CFAP44Q96MT7 982 aa29.91■■■□□ 2.38
CRAT-204ENST00000441796 ERBB4Q15303 1308 aa29.91■■■□□ 2.38
CRAT-204ENST00000441796 LAS1LQ9Y4W2 734 aaKnown RBP29.9■■■□□ 2.38
CRAT-204ENST00000441796 YY1P25490 414 aa29.89■■■□□ 2.38
CRAT-204ENST00000441796 CALD1Q05682 793 aaKnown RBP29.89■■■□□ 2.38
CRAT-204ENST00000441796 KIF13BQ9NQT8 1826 aa29.88■■■□□ 2.37
CRAT-204ENST00000441796 BICDL1Q6ZP65 573 aa29.88■■■□□ 2.37
CRAT-204ENST00000441796 A0A0G2JLW4 131 aa29.87■■■□□ 2.37
CRAT-204ENST00000441796 ZNF853P0CG23 659 aa29.87■■■□□ 2.37
CRAT-204ENST00000441796 ZNF652Q9Y2D9 606 aa29.87■■■□□ 2.37
CRAT-204ENST00000441796 LAMB4A4D0S4 1761 aa29.87■■■□□ 2.37
CRAT-204ENST00000441796 SCN7AQ01118 1682 aa29.86■■■□□ 2.37
CRAT-204ENST00000441796 DPEP1P16444 411 aa29.86■■■□□ 2.37
CRAT-204ENST00000441796 NCBP3Q53F19 620 aaKnown RBP29.86■■■□□ 2.37
CRAT-204ENST00000441796 CCDC27Q2M243 656 aa29.85■■■□□ 2.37
CRAT-204ENST00000441796 SETDB2Q96T68 719 aa29.85■■■□□ 2.37
CRAT-204ENST00000441796 IFT57Q9NWB7 429 aa29.85■■■□□ 2.37
CRAT-204ENST00000441796 UTRNP46939 3433 aa29.84■■■□□ 2.37
CRAT-204ENST00000441796 CARMIL3Q8ND23 1372 aa29.84■■■□□ 2.37
CRAT-204ENST00000441796 EIF2S2P20042 333 aaKnown RBP29.83■■■□□ 2.37
CRAT-204ENST00000441796 KCNA3P22001 575 aa29.83■■■□□ 2.37
CRAT-204ENST00000441796 GNAI1P63096 354 aa29.83■■■□□ 2.37
CRAT-204ENST00000441796 ERVV-1B6SEH8 477 aa29.82■■■□□ 2.36
CRAT-204ENST00000441796 HOXB7P09629 217 aa29.82■■■□□ 2.36
CRAT-204ENST00000441796 MYL6BP14649 208 aa29.82■■■□□ 2.36
CRAT-204ENST00000441796 PDIA6Q15084 440 aa29.82■■■□□ 2.36
CRAT-204ENST00000441796 MBIPQ9NS73 344 aa29.82■■■□□ 2.36
CRAT-204ENST00000441796 KRT24Q2M2I5 525 aa29.81■■■□□ 2.36
CRAT-204ENST00000441796 NGEFQ8N5V2 710 aa29.81■■■□□ 2.36
CRAT-204ENST00000441796 WWC3Q9ULE0 1092 aa29.81■■■□□ 2.36
CRAT-204ENST00000441796 NRXN2Q9P2S2 1712 aa29.81■■■□□ 2.36
CRAT-204ENST00000441796 KIAA1551Q9HCM1 1747 aa29.8■■■□□ 2.36
CRAT-204ENST00000441796 LRP10Q7Z4F1 713 aa29.8■■■□□ 2.36
CRAT-204ENST00000441796 PIM2Q9P1W9 311 aa29.8■■■□□ 2.36
CRAT-204ENST00000441796 MAP3K15Q6ZN16 1313 aa29.79■■■□□ 2.36
CRAT-204ENST00000441796 HLFQ16534 295 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms