RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 THRAP3Q9Y2W1 955 aaKnown RBP6.57□□□□□ -1.36
CCDC140-202ENST00000440903 IL2RBP14784 551 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 IL13P35225 146 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 BCAMP50895 628 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 KCNC4Q03721 635 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 LMOD3Q0VAK6 560 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 PPP1R15BQ5SWA1 713 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 SULT6B1Q6IMI4 303 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 LARP1Q6PKG0 1096 aaKnown RBP6.56□□□□□ -1.36
CCDC140-202ENST00000440903 GAS2L2Q8NHY3 880 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 USP35Q9P2H5 1018 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 ATRNO75882 1429 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 RGPD1P0DJD0 1748 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 KDRP35968 1356 aa6.56□□□□□ -1.36
CCDC140-202ENST00000440903 WNK3Q9BYP7 1800 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 SPATA31A1Q5TZJ5 1347 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 SPATA31A5Q5VU36 1347 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 SPATA31A7Q8IWB4 1347 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 PCDH11XQ9BZA7 1347 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 PCDH11YQ9BZA8 1340 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 BCL9LQ86UU0 1499 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 RGPD5Q99666 1765 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 EVI5O60447 810 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 FCHSD2O94868 740 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 HMOX1P09601 288 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 PRKAR2BP31323 418 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 AMOTQ4VCS5 1084 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 PLEKHO1Q53GL0 409 aaPredicted RBP6.55□□□□□ -1.36
CCDC140-202ENST00000440903 C1orf141Q5JVX7 400 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 ILDR2Q71H61 639 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 USHBP1Q8N6Y0 703 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 EYA1Q99502 592 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 SPG7Q9UQ90 795 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 NCAPD2Q15021 1401 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 TNS2Q63HR2 1409 aa6.55□□□□□ -1.36
CCDC140-202ENST00000440903 OVOS2A0A0G2JMS6 1433 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 PPP1R3GB7ZBB8 358 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 HSP90AB1P08238 724 aaKnown RBP6.54□□□□□ -1.36
CCDC140-202ENST00000440903 RBM6P78332 1123 aaKnown RBP6.54□□□□□ -1.36
CCDC140-202ENST00000440903 NBPF6Q5VWK0 638 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 TRAF7Q6Q0C0 670 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 BARGINQ6ZT62 677 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 NYAP1Q6ZVC0 841 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 RTF1Q92541 710 aaKnown RBP6.54□□□□□ -1.36
CCDC140-202ENST00000440903 RUNDC1Q96C34 613 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 GJD4Q96KN9 370 aaPredicted RBP6.54□□□□□ -1.36
CCDC140-202ENST00000440903 NBPF4Q96M43 638 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 RABGEF1Q9UJ41 708 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 MEGF6O75095 1541 aa6.54□□□□□ -1.36
CCDC140-202ENST00000440903 GFRA3O60609 400 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 RXRBP28702 533 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 CALD1Q05682 793 aaKnown RBP6.53□□□□□ -1.36
CCDC140-202ENST00000440903 PDE3BQ13370 1112 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 DDB1Q16531 1140 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 FAM98CQ17RN3 349 aaKnown RBP6.53□□□□□ -1.36
CCDC140-202ENST00000440903 PROX2Q3B8N5 592 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 ZNF530Q6P9A1 599 aaPredicted RBP6.53□□□□□ -1.36
CCDC140-202ENST00000440903 NGEFQ8N5V2 710 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 PNISRQ8TF01 805 aaKnown RBP6.53□□□□□ -1.36
CCDC140-202ENST00000440903 RSPH6AQ9H0K4 717 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 QTRT2Q9H974 415 aaKnown RBP6.53□□□□□ -1.36
CCDC140-202ENST00000440903 LRRC37A3O60309 1634 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 PKD1L3Q7Z443 1732 aa6.53□□□□□ -1.36
CCDC140-202ENST00000440903 GLI3P10071 1580 aa6.52□□□□□ -1.36
CCDC140-202ENST00000440903 DISP2A7MBM2 1401 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 SOWAHBA6NEL2 793 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 EXOC5O00471 708 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 AEBP1Q8IUX7 1158 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 CCDC146Q8IYE0 955 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 ZCRB1Q8TBF4 217 aaKnown RBP6.52□□□□□ -1.37
CCDC140-202ENST00000440903 ANO8Q9HCE9 1232 aaPredicted RBP6.52□□□□□ -1.37
CCDC140-202ENST00000440903 ADAMTS8Q9UP79 889 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 MAP3K5Q99683 1374 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 THSD7AQ9UPZ6 1657 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 RGPD2P0DJD1 1756 aa6.52□□□□□ -1.37
CCDC140-202ENST00000440903 HNRNPUQ00839 825 aaKnown RBP eCLIP6.51□□□□□ -1.37
CCDC140-202ENST00000440903 NFE2L2Q16236 605 aa6.51□□□□□ -1.37
CCDC140-202ENST00000440903 CCDC184Q52MB2 194 aa6.51□□□□□ -1.37
CCDC140-202ENST00000440903 LAPTM4BQ86VI4 370 aa6.51□□□□□ -1.37
CCDC140-202ENST00000440903 IFNL2Q8IZJ0 200 aa6.51□□□□□ -1.37
CCDC140-202ENST00000440903 WBP1LQ9NX94 342 aa6.51□□□□□ -1.37
CCDC140-202ENST00000440903 GNAT3A8MTJ3 354 aa6.5□□□□□ -1.37
CCDC140-202ENST00000440903 MAP3K9P80192 1104 aa6.5□□□□□ -1.37
CCDC140-202ENST00000440903 TEFQ10587 303 aa6.5□□□□□ -1.37
CCDC140-202ENST00000440903 AKAP4Q5JQC9 854 aa6.5□□□□□ -1.37
CCDC140-202ENST00000440903 ZFRQ96KR1 1074 aaKnown RBP6.5□□□□□ -1.37
CCDC140-202ENST00000440903 CRISPLD2Q9H0B8 497 aa6.5□□□□□ -1.37
CCDC140-202ENST00000440903 RTN4Q9NQC3 1192 aaKnown RBP6.5□□□□□ -1.37
CCDC140-202ENST00000440903 RGS12O14924 1447 aa6.5□□□□□ -1.37
CCDC140-202ENST00000440903 APAF1O14727 1248 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 HTATSF1O43719 755 aaKnown RBP6.49□□□□□ -1.37
CCDC140-202ENST00000440903 PDE4AP27815 886 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 RIPK4P57078 832 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 NEUROD2Q15784 382 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 MTHFSDQ2M296 383 aaKnown RBP6.49□□□□□ -1.37
CCDC140-202ENST00000440903 SEPT12Q8IYM1 358 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 HS6ST3Q8IZP7 471 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 DDX54Q8TDD1 881 aaKnown RBP6.49□□□□□ -1.37
CCDC140-202ENST00000440903 DCAF5Q96JK2 942 aa6.49□□□□□ -1.37
CCDC140-202ENST00000440903 PHKG2P15735 406 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms