RNA–Protein interactions for RNA: ENST00000440571.5

CNOT3-203, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-203ENST00000440571 SIPA1L3O60292 1781 aaPredicted RBP29.42■■■□□ 2.3
CNOT3-203ENST00000440571 PRAMEF22A3QJZ6 481 aa29.42■■■□□ 2.3
CNOT3-203ENST00000440571 PPP1R1BQ9UD71 204 aaPredicted RBP29.42■■■□□ 2.3
CNOT3-203ENST00000440571 ZBTB1Q9Y2K1 713 aa29.42■■■□□ 2.3
CNOT3-203ENST00000440571 A1BGP04217 495 aa29.41■■■□□ 2.3
CNOT3-203ENST00000440571 PTGER2P43116 358 aa29.41■■■□□ 2.3
CNOT3-203ENST00000440571 CCDC27Q2M243 656 aa29.41■■■□□ 2.3
CNOT3-203ENST00000440571 NCBP3Q53F19 620 aaKnown RBP29.41■■■□□ 2.3
CNOT3-203ENST00000440571 CFAP44Q96MT7 982 aa29.41■■■□□ 2.3
CNOT3-203ENST00000440571 GIGYF1O75420 1035 aaPredicted RBP29.4■■■□□ 2.3
CNOT3-203ENST00000440571 POLD1P28340 1107 aa29.4■■■□□ 2.3
CNOT3-203ENST00000440571 SALL2Q9Y467 1007 aaPredicted RBP29.4■■■□□ 2.3
CNOT3-203ENST00000440571 MSL1Q68DK7 614 aa29.39■■■□□ 2.3
CNOT3-203ENST00000440571 CASZ1Q86V15 1759 aa29.39■■■□□ 2.29
CNOT3-203ENST00000440571 WWC1Q8IX03 1113 aa29.38■■■□□ 2.29
CNOT3-203ENST00000440571 SOS1Q07889 1333 aaPredicted RBP29.38■■■□□ 2.29
CNOT3-203ENST00000440571 SRCAPQ6ZRS2 3230 aa29.37■■■□□ 2.29
CNOT3-203ENST00000440571 SGIP1Q9BQI5 828 aa29.37■■■□□ 2.29
CNOT3-203ENST00000440571 GNAI1P63096 354 aa29.36■■■□□ 2.29
CNOT3-203ENST00000440571 NPM2Q86SE8 214 aaKnown RBP29.36■■■□□ 2.29
CNOT3-203ENST00000440571 IFT57Q9NWB7 429 aa29.36■■■□□ 2.29
CNOT3-203ENST00000440571 TJP1Q07157 1748 aa29.35■■■□□ 2.29
CNOT3-203ENST00000440571 UBR2Q8IWV8 1755 aa29.35■■■□□ 2.29
CNOT3-203ENST00000440571 ZNF853P0CG23 659 aa29.35■■■□□ 2.29
CNOT3-203ENST00000440571 EIF5P55010 431 aaKnown RBP29.35■■■□□ 2.29
CNOT3-203ENST00000440571 A0A087WZG4 1122 aa29.34■■■□□ 2.29
CNOT3-203ENST00000440571 ZPR1O75312 459 aa29.34■■■□□ 2.29
CNOT3-203ENST00000440571 IL6STP40189 918 aaPredicted RBP29.34■■■□□ 2.29
CNOT3-203ENST00000440571 ARXQ96QS3 562 aa29.34■■■□□ 2.29
CNOT3-203ENST00000440571 ZNF330Q9Y3S2 320 aaPredicted RBP29.34■■■□□ 2.29
CNOT3-203ENST00000440571 NLGN1Q8N2Q7 840 aa29.33■■■□□ 2.29
CNOT3-203ENST00000440571 NGEFQ8N5V2 710 aa29.33■■■□□ 2.29
CNOT3-203ENST00000440571 MBIPQ9NS73 344 aa29.33■■■□□ 2.29
CNOT3-203ENST00000440571 QSER1Q2KHR3 1735 aa29.33■■■□□ 2.29
CNOT3-203ENST00000440571 SRP68Q9UHB9 627 aaKnown RBP29.32■■■□□ 2.28
CNOT3-203ENST00000440571 COL5A3P25940 1745 aaPredicted RBP29.31■■■□□ 2.28
CNOT3-203ENST00000440571 CICQ96RK0 1608 aaPredicted RBP29.31■■■□□ 2.28
CNOT3-203ENST00000440571 GYS1P13807 737 aa29.31■■■□□ 2.28
CNOT3-203ENST00000440571 UBR3Q6ZT12 1888 aa29.3■■■□□ 2.28
CNOT3-203ENST00000440571 TUBGCP6Q96RT7 1819 aa29.3■■■□□ 2.28
CNOT3-203ENST00000440571 PIP4K2AP48426 406 aaPredicted RBP29.3■■■□□ 2.28
CNOT3-203ENST00000440571 NARFQ9UHQ1 456 aa29.3■■■□□ 2.28
CNOT3-203ENST00000440571 MYH14Q7Z406 1995 aaKnown RBP29.3■■■□□ 2.28
CNOT3-203ENST00000440571 COL15A1P39059 1388 aa29.29■■■□□ 2.28
CNOT3-203ENST00000440571 EIF2S2P20042 333 aaKnown RBP29.29■■■□□ 2.28
CNOT3-203ENST00000440571 WDR63Q8IWG1 891 aa29.29■■■□□ 2.28
CNOT3-203ENST00000440571 LRP5O75197 1615 aa29.28■■■□□ 2.28
CNOT3-203ENST00000440571 USP42Q9H9J4 1324 aaKnown RBP29.28■■■□□ 2.28
CNOT3-203ENST00000440571 USPL1Q5W0Q7 1092 aa29.28■■■□□ 2.28
CNOT3-203ENST00000440571 NBPF26B4DH59 902 aa29.27■■■□□ 2.28
CNOT3-203ENST00000440571 KRT24Q2M2I5 525 aa29.27■■■□□ 2.28
CNOT3-203ENST00000440571 NBPF10Q6P3W6 841 aaKnown RBP29.27■■■□□ 2.28
CNOT3-203ENST00000440571 NBPF15Q8N660 670 aa29.27■■■□□ 2.28
CNOT3-203ENST00000440571 TBC1D2BQ9UPU7 963 aa29.27■■■□□ 2.28
CNOT3-203ENST00000440571 IL16Q14005 1332 aa29.26■■■□□ 2.27
CNOT3-203ENST00000440571 FKBP8Q14318 412 aa29.25■■■□□ 2.27
CNOT3-203ENST00000440571 MMP10P09238 476 aa29.24■■■□□ 2.27
CNOT3-203ENST00000440571 KDM3BQ7LBC6 1761 aa29.24■■■□□ 2.27
CNOT3-203ENST00000440571 DUSP27Q5VZP5 1158 aa29.23■■■□□ 2.27
CNOT3-203ENST00000440571 HOXB7P09629 217 aa29.22■■■□□ 2.27
CNOT3-203ENST00000440571 MYL6BP14649 208 aa29.22■■■□□ 2.27
CNOT3-203ENST00000440571 DZIP3Q86Y13 1208 aaKnown RBP29.22■■■□□ 2.27
CNOT3-203ENST00000440571 NECTIN2Q92692 538 aa29.22■■■□□ 2.27
CNOT3-203ENST00000440571 FHDC1Q9C0D6 1143 aaPredicted RBP29.22■■■□□ 2.27
CNOT3-203ENST00000440571 ERBB4Q15303 1308 aa29.21■■■□□ 2.27
CNOT3-203ENST00000440571 KLHL34Q8N239 644 aa29.21■■■□□ 2.27
CNOT3-203ENST00000440571 TSR2Q969E8 191 aaKnown RBP29.21■■■□□ 2.27
CNOT3-203ENST00000440571 PARP3Q9Y6F1 533 aa29.21■■■□□ 2.27
CNOT3-203ENST00000440571 ELL2O00472 640 aaPredicted RBP29.19■■■□□ 2.26
CNOT3-203ENST00000440571 SYT17Q9BSW7 474 aa29.19■■■□□ 2.26
CNOT3-203ENST00000440571 BCL2L12Q9HB09 334 aa29.19■■■□□ 2.26
CNOT3-203ENST00000440571 TM4SF1P30408 202 aa29.18■■■□□ 2.26
CNOT3-203ENST00000440571 HDGFL1Q5TGJ6 251 aa29.18■■■□□ 2.26
CNOT3-203ENST00000440571 C8orf58Q8NAV2 365 aa29.18■■■□□ 2.26
CNOT3-203ENST00000440571 CAMTA2O94983 1202 aa29.17■■■□□ 2.26
CNOT3-203ENST00000440571 PDIA6Q15084 440 aa29.16■■■□□ 2.26
CNOT3-203ENST00000440571 CHMP4AQ9BY43 222 aa29.15■■■□□ 2.26
CNOT3-203ENST00000440571 GOLGA2Q08379 1002 aa29.14■■■□□ 2.26
CNOT3-203ENST00000440571 NFIXQ14938 502 aa29.14■■■□□ 2.26
CNOT3-203ENST00000440571 BICDL1Q6ZP65 573 aa29.14■■■□□ 2.26
CNOT3-203ENST00000440571 DDX21Q9NR30 783 aaKnown RBP eCLIP29.14■■■□□ 2.26
CNOT3-203ENST00000440571 ANXA1P04083 346 aa29.13■■■□□ 2.25
CNOT3-203ENST00000440571 CLEC4GQ6UXB4 293 aa29.13■■■□□ 2.25
CNOT3-203ENST00000440571 MYH16Q9H6N6 1097 aa29.13■■■□□ 2.25
CNOT3-203ENST00000440571 ZNF652Q9Y2D9 606 aa29.13■■■□□ 2.25
CNOT3-203ENST00000440571 CD2APQ9Y5K6 639 aa29.13■■■□□ 2.25
CNOT3-203ENST00000440571 PROSER3Q2NL68 480 aa29.12■■■□□ 2.25
CNOT3-203ENST00000440571 TBC1D9BQ66K14 1250 aa29.12■■■□□ 2.25
CNOT3-203ENST00000440571 KIF6Q6ZMV9 814 aa29.12■■■□□ 2.25
CNOT3-203ENST00000440571 TSPYL6Q8N831 410 aa29.12■■■□□ 2.25
CNOT3-203ENST00000440571 SPINK5Q9NQ38 1064 aaPredicted RBP29.12■■■□□ 2.25
CNOT3-203ENST00000440571 DBF4Q9UBU7 674 aaPredicted RBP29.12■■■□□ 2.25
CNOT3-203ENST00000440571 POLRMTO00411 1230 aaKnown RBP29.11■■■□□ 2.25
CNOT3-203ENST00000440571 DDR1Q08345 913 aa29.11■■■□□ 2.25
CNOT3-203ENST00000440571 TTLL7Q6ZT98 887 aa29.11■■■□□ 2.25
CNOT3-203ENST00000440571 CHPF2Q9P2E5 772 aa29.11■■■□□ 2.25
CNOT3-203ENST00000440571 ZNF521Q96K83 1311 aa29.11■■■□□ 2.25
CNOT3-203ENST00000440571 FANCIQ9NVI1 1328 aa29.11■■■□□ 2.25
CNOT3-203ENST00000440571 ERVV-1B6SEH8 477 aa29.1■■■□□ 2.25
CNOT3-203ENST00000440571 SETDB2Q96T68 719 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms