RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 LRRFIP2Q9Y608 721 aaKnown RBP10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 PNMA6EA0A0J9YXQ4 647 aa10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 SMARCA5O60264 1052 aaPredicted RBP10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 MX1P20591 662 aa10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 PHAXQ9H814 394 aaKnown RBP10.09□□□□□ -0.79
SPIRE1-204ENST00000440472 DDX11L8A8MPP1 907 aa10.08□□□□□ -0.8
SPIRE1-204ENST00000440472 ANAPC15P60006 121 aa10.08□□□□□ -0.8
SPIRE1-204ENST00000440472 KSR2Q6VAB6 950 aa10.08□□□□□ -0.8
SPIRE1-204ENST00000440472 CHPF2Q9P2E5 772 aa10.08□□□□□ -0.8
SPIRE1-204ENST00000440472 SPG7Q9UQ90 795 aa10.08□□□□□ -0.8
SPIRE1-204ENST00000440472 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 RAB3GAP1Q15042 981 aa10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 MPRIPQ6WCQ1 1025 aa10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 KIF1BPQ96EK5 621 aa10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 DDX21Q9NR30 783 aaKnown RBP eCLIP10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 COL15A1P39059 1388 aa10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 SPATA31A3Q5VYP0 1347 aa10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 TATP17735 454 aaPredicted RBP10.07□□□□□ -0.8
SPIRE1-204ENST00000440472 PI4KAP2A4QPH2 592 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 KCNQ3O43525 872 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 DDX58O95786 925 aaKnown RBP10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 PPP1R42Q7Z4L9 355 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 PI4KAP1Q8N8J0 262 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 RAPGEF4Q8WZA2 1011 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 SLC52A2Q9HAB3 445 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 CWC22Q9HCG8 908 aaKnown RBP10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 EXOC6BQ9Y2D4 811 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 KDM6AO15550 1401 aaPredicted RBP10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 XIRP1Q702N8 1843 aaKnown RBP10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 PHKG2P15735 406 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 EIF2S2P20042 333 aaKnown RBP10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 MCM2P49736 904 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 ESYT1Q9BSJ8 1104 aa10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 ISY1Q9ULR0 285 aaKnown RBP10.06□□□□□ -0.8
SPIRE1-204ENST00000440472 TTC41PQ6P2S7 1318 aa10.05□□□□□ -0.8
SPIRE1-204ENST00000440472 ERC1Q8IUD2 1116 aa10.05□□□□□ -0.8
SPIRE1-204ENST00000440472 IFNL2Q8IZJ0 200 aa10.05□□□□□ -0.8
SPIRE1-204ENST00000440472 LINS1Q8NG48 757 aa10.05□□□□□ -0.8
SPIRE1-204ENST00000440472 NECTIN2Q92692 538 aa10.05□□□□□ -0.8
SPIRE1-204ENST00000440472 ST18O60284 1047 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 CHMLP26374 656 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 XPCQ01831 940 aaPredicted RBP10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 RHPN1Q8TCX5 695 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 DCAF5Q96JK2 942 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 GBP4Q96PP9 640 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 MEGF6O75095 1541 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 ERBB4Q15303 1308 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 HSPA2P54652 639 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 PDIA6Q15084 440 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 SKOR2Q2VWA4 1001 aaPredicted RBP10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 ZNF790Q6PG37 636 aa10.04□□□□□ -0.8
SPIRE1-204ENST00000440472 LTBP4Q8N2S1 1624 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 CD2BP2O95400 341 aaKnown RBP10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 MCCP23508 829 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 NUCB2P80303 420 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 L1TD1Q5T7N2 865 aaKnown RBP10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 LAMB4A4D0S4 1761 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 ZBTB7CA1YPR0 619 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 SRGAP3O43295 1099 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 SURF6O75683 361 aaKnown RBP10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 NBPF7P0C2Y1 421 aaPredicted RBP10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 LMOD2Q6P5Q4 547 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 LARP1Q6PKG0 1096 aaKnown RBP10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 PI4K2BQ8TCG2 481 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 MAP3K2Q9Y2U5 619 aa10.03□□□□□ -0.8
SPIRE1-204ENST00000440472 C5P01031 1676 aa10.02□□□□□ -0.8
SPIRE1-204ENST00000440472 CYP2E1P05181 493 aaPredicted RBP10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 TNPO1Q92973 898 aaKnown RBP10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 BCL11AQ9H165 835 aa10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 GLI3P10071 1580 aa10.02□□□□□ -0.81
SPIRE1-204ENST00000440472 AK9Q5TCS8 1911 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 APBB1O00213 710 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 NLRP2Q9NX02 1062 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 GRM8O00222 908 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 TRAK2O60296 914 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 GLRX3O76003 335 aaKnown RBP10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 SNRPA1P09661 255 aaKnown RBP10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 LRP10Q7Z4F1 713 aa10.01□□□□□ -0.81
SPIRE1-204ENST00000440472 CUL4AQ13619 759 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 NKX1-1Q15270 411 aaPredicted RBP10□□□□□ -0.81
SPIRE1-204ENST00000440472 PROSER3Q2NL68 480 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 CNTROBQ8N137 903 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 INTS4Q96HW7 963 aaKnown RBP10□□□□□ -0.81
SPIRE1-204ENST00000440472 C9orf78Q9NZ63 289 aaPredicted RBP10□□□□□ -0.81
SPIRE1-204ENST00000440472 PAPPAQ13219 1627 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 STRCQ7RTU9 1775 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 UBR2Q8IWV8 1755 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 HSP90AA1P07900 732 aaKnown RBP10□□□□□ -0.81
SPIRE1-204ENST00000440472 TICAM2Q86XR7 235 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 FMNL2Q96PY5 1086 aa10□□□□□ -0.81
SPIRE1-204ENST00000440472 METTL22Q9BUU2 404 aaPredicted RBP10□□□□□ -0.81
SPIRE1-204ENST00000440472 WDR17Q8IZU2 1322 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 CYP27B1O15528 508 aa9.99□□□□□ -0.81
SPIRE1-204ENST00000440472 BRINP3Q76B58 766 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms