RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 TOM1L2Q6ZVM7 507 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 PTF1AQ7RTS3 328 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 MARCH10Q8NA82 808 aaPredicted RBP10.29□□□□□ -0.76
HCG20-208ENST00000439406 SLC16A10Q8TF71 515 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 KIF12Q96FN5 646 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 ANP32EQ9BTT0 268 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
HCG20-208ENST00000439406 PEAK1Q9H792 1746 aa10.29□□□□□ -0.76
HCG20-208ENST00000439406 PHRF1Q9P1Y6 1649 aaKnown RBP10.29□□□□□ -0.76
HCG20-208ENST00000439406 CEP350Q5VT06 3117 aa10.28□□□□□ -0.76
HCG20-208ENST00000439406 TCF3P15923 654 aa10.28□□□□□ -0.76
HCG20-208ENST00000439406 WASHC4Q2M389 1173 aa10.28□□□□□ -0.76
HCG20-208ENST00000439406 CCER1Q8TC90 406 aaPredicted RBP10.28□□□□□ -0.76
HCG20-208ENST00000439406 SREK1Q8WXA9 508 aaKnown RBP10.28□□□□□ -0.76
HCG20-208ENST00000439406 COL5A2P05997 1499 aaPredicted RBP10.28□□□□□ -0.76
HCG20-208ENST00000439406 LMO7Q8WWI1 1683 aa10.28□□□□□ -0.76
HCG20-208ENST00000439406 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.76
HCG20-208ENST00000439406 ADGRB1O14514 1584 aa10.27□□□□□ -0.76
HCG20-208ENST00000439406 GRIN3BO60391 1043 aa10.27□□□□□ -0.77
HCG20-208ENST00000439406 ATG7O95352 703 aa10.27□□□□□ -0.77
HCG20-208ENST00000439406 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
HCG20-208ENST00000439406 ADAMTS19Q8TE59 1207 aa10.27□□□□□ -0.77
HCG20-208ENST00000439406 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
HCG20-208ENST00000439406 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
HCG20-208ENST00000439406 LIMD1Q9UGP4 676 aa10.26□□□□□ -0.77
HCG20-208ENST00000439406 ITSN1Q15811 1721 aa10.26□□□□□ -0.77
HCG20-208ENST00000439406 PALM3A6NDB9 673 aaPredicted RBP10.25□□□□□ -0.77
HCG20-208ENST00000439406 NCLP19338 710 aaKnown RBP10.25□□□□□ -0.77
HCG20-208ENST00000439406 POLD1P28340 1107 aa10.25□□□□□ -0.77
HCG20-208ENST00000439406 PRIM1P49642 420 aaKnown RBP10.25□□□□□ -0.77
HCG20-208ENST00000439406 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
HCG20-208ENST00000439406 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
HCG20-208ENST00000439406 CARD10Q9BWT7 1032 aa10.25□□□□□ -0.77
HCG20-208ENST00000439406 WDR17Q8IZU2 1322 aa10.25□□□□□ -0.77
HCG20-208ENST00000439406 ZNF16P17020 682 aaPredicted RBP10.24□□□□□ -0.77
HCG20-208ENST00000439406 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
HCG20-208ENST00000439406 HSPA6P17066 643 aa10.23□□□□□ -0.77
HCG20-208ENST00000439406 DCAF11Q8TEB1 546 aa10.23□□□□□ -0.77
HCG20-208ENST00000439406 BCL2L13Q9BXK5 485 aa10.23□□□□□ -0.77
HCG20-208ENST00000439406 AP1G2O75843 785 aa10.22□□□□□ -0.77
HCG20-208ENST00000439406 AXIN2Q9Y2T1 843 aa10.22□□□□□ -0.77
HCG20-208ENST00000439406 NDUFB9Q9Y6M9 179 aa10.22□□□□□ -0.77
HCG20-208ENST00000439406 BRD2P25440 801 aaKnown RBP10.21□□□□□ -0.77
HCG20-208ENST00000439406 TUSC1Q2TAM9 212 aa10.21□□□□□ -0.77
HCG20-208ENST00000439406 CDCA8Q53HL2 280 aa10.21□□□□□ -0.77
HCG20-208ENST00000439406 DNAJC14Q6Y2X3 702 aaPredicted RBP10.21□□□□□ -0.77
HCG20-208ENST00000439406 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.77
HCG20-208ENST00000439406 KCNH5Q8NCM2 988 aa10.21□□□□□ -0.77
HCG20-208ENST00000439406 LRRC37A3O60309 1634 aa10.21□□□□□ -0.78
HCG20-208ENST00000439406 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
HCG20-208ENST00000439406 SLC27A3Q5K4L6 730 aa10.2□□□□□ -0.78
HCG20-208ENST00000439406 ARHGEF25Q86VW2 580 aa10.2□□□□□ -0.78
HCG20-208ENST00000439406 ANKRD13AQ8IZ07 590 aa10.2□□□□□ -0.78
HCG20-208ENST00000439406 TMEM106CQ9BVX2 250 aa10.2□□□□□ -0.78
HCG20-208ENST00000439406 CWC22Q9HCG8 908 aaKnown RBP10.2□□□□□ -0.78
HCG20-208ENST00000439406 CCDC7Q96M83 1385 aa10.19□□□□□ -0.78
HCG20-208ENST00000439406 OATP04181 439 aa10.19□□□□□ -0.78
HCG20-208ENST00000439406 DHX37Q8IY37 1157 aaKnown RBP10.19□□□□□ -0.78
HCG20-208ENST00000439406 TFIP11Q9UBB9 837 aaKnown RBP10.19□□□□□ -0.78
HCG20-208ENST00000439406 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
HCG20-208ENST00000439406 ZNF827Q17R98 1081 aa10.18□□□□□ -0.78
HCG20-208ENST00000439406 UBXN4Q92575 508 aa10.18□□□□□ -0.78
HCG20-208ENST00000439406 NPDC1Q9NQX5 325 aaPredicted RBP10.18□□□□□ -0.78
HCG20-208ENST00000439406 LRRC4BQ9NT99 713 aa10.18□□□□□ -0.78
HCG20-208ENST00000439406 SHANK3Q9BYB0 1731 aa10.18□□□□□ -0.78
HCG20-208ENST00000439406 USP6P35125 1406 aa10.17□□□□□ -0.78
HCG20-208ENST00000439406 USP17L8P0C7I0 530 aa10.17□□□□□ -0.78
HCG20-208ENST00000439406 HMGB2P26583 209 aaKnown RBP10.17□□□□□ -0.78
HCG20-208ENST00000439406 METTL3Q86U44 580 aaKnown RBP10.17□□□□□ -0.78
HCG20-208ENST00000439406 GIPC2Q8TF65 315 aa10.17□□□□□ -0.78
HCG20-208ENST00000439406 ACSBG1Q96GR2 724 aa10.17□□□□□ -0.78
HCG20-208ENST00000439406 CDHR5Q9HBB8 845 aa10.17□□□□□ -0.78
HCG20-208ENST00000439406 CABP1Q9NZU7 370 aa10.17□□□□□ -0.78
HCG20-208ENST00000439406 PPIP5K1Q6PFW1 1433 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 COL18A1P39060 1754 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 TOPAZ1Q8N9V7 1692 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 GOLGB1Q14789 3259 aaKnown RBP10.16□□□□□ -0.78
HCG20-208ENST00000439406 YBX3P16989 372 aaKnown RBP eCLIP10.16□□□□□ -0.78
HCG20-208ENST00000439406 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
HCG20-208ENST00000439406 NLGN2Q8NFZ4 835 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 NLRP7Q8WX94 980 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.16□□□□□ -0.78
HCG20-208ENST00000439406 TFCP2L1Q9NZI6 479 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 SLIT3O75094 1523 aa10.16□□□□□ -0.78
HCG20-208ENST00000439406 PNPLA7Q6ZV29 1317 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 KAT6BQ8WYB5 2073 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 SPTLC1O15269 473 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 APLP1P51693 650 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 SF3A1Q15459 793 aaKnown RBP10.15□□□□□ -0.78
HCG20-208ENST00000439406 CSPP1Q1MSJ5 1256 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 ALG2Q9H553 416 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 COL24A1Q17RW2 1714 aa10.15□□□□□ -0.78
HCG20-208ENST00000439406 ARHGEF28Q8N1W1 1705 aaKnown RBP10.15□□□□□ -0.78
HCG20-208ENST00000439406 ATP10DQ9P241 1426 aa10.15□□□□□ -0.79
HCG20-208ENST00000439406 IL2RBP14784 551 aa10.14□□□□□ -0.79
HCG20-208ENST00000439406 VAC14Q08AM6 782 aa10.14□□□□□ -0.79
HCG20-208ENST00000439406 MICALL2Q8IY33 904 aa10.14□□□□□ -0.79
HCG20-208ENST00000439406 PIP4P2Q8N4L2 257 aa10.14□□□□□ -0.79
HCG20-208ENST00000439406 CD2APQ9Y5K6 639 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms