RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
LSMEM1-202ENST00000439068 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 HOXA2O43364 376 aa12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 TUSC1Q2TAM9 212 aa12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 DCAF11Q8TEB1 546 aa12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 POM121Q96HA1 1249 aa12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 USP35Q9P2H5 1018 aa12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 PPP1R1BQ9UD71 204 aaPredicted RBP12.71□□□□□ -0.37
LSMEM1-202ENST00000439068 DISP2A7MBM2 1401 aa12.71□□□□□ -0.38
LSMEM1-202ENST00000439068 LILRB3O75022 631 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 RNF40O75150 1001 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 YY1P25490 414 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 ZC3H6P61129 1189 aaKnown RBP12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 CHRNA2Q15822 529 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 NUDT16Q96DE0 195 aaKnown RBP12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 ZFRQ96KR1 1074 aaKnown RBP12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 PCDHGC3Q9UN70 934 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 DLC1Q96QB1 1528 aa12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 RGPD8O14715 1765 aaPredicted RBP12.7□□□□□ -0.38
LSMEM1-202ENST00000439068 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
LSMEM1-202ENST00000439068 IFT172Q9UG01 1749 aa12.69□□□□□ -0.38
LSMEM1-202ENST00000439068 LSM11P83369 360 aaKnown RBP eCLIP12.69□□□□□ -0.38
LSMEM1-202ENST00000439068 ADGRD1Q6QNK2 874 aa12.69□□□□□ -0.38
LSMEM1-202ENST00000439068 LAPTM4BQ86VI4 370 aa12.69□□□□□ -0.38
LSMEM1-202ENST00000439068 KIAA0232Q92628 1395 aa12.69□□□□□ -0.38
LSMEM1-202ENST00000439068 PRR36Q9H6K5 1346 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 TK2O00142 265 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 FDX1P10109 184 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 USP46P62068 366 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 THRAP3Q9Y2W1 955 aaKnown RBP12.68□□□□□ -0.38
LSMEM1-202ENST00000439068 CFHP08603 1231 aa12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 GJA5P36382 358 aa12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 TMEM259Q4ZIN3 620 aa12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 TCP11L2Q8N4U5 519 aa12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 MRPL50Q8N5N7 158 aaKnown RBP12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 ABTB2Q8N961 1025 aa12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 RGPD1P0DJD0 1748 aa12.67□□□□□ -0.38
LSMEM1-202ENST00000439068 FUT2Q10981 343 aa12.66□□□□□ -0.38
LSMEM1-202ENST00000439068 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
LSMEM1-202ENST00000439068 BANK1Q8NDB2 785 aa12.66□□□□□ -0.38
LSMEM1-202ENST00000439068 CDK19Q9BWU1 502 aa12.66□□□□□ -0.38
LSMEM1-202ENST00000439068 A6NJR5 290 aa12.65□□□□□ -0.38
LSMEM1-202ENST00000439068 KCNQ2O43526 872 aa12.65□□□□□ -0.38
LSMEM1-202ENST00000439068 AP1G2O75843 785 aa12.65□□□□□ -0.38
LSMEM1-202ENST00000439068 ANKRD13DQ6ZTN6 518 aa12.65□□□□□ -0.38
LSMEM1-202ENST00000439068 NLRP13Q86W25 1043 aa12.65□□□□□ -0.38
LSMEM1-202ENST00000439068 TULP4Q9NRJ4 1543 aa12.65□□□□□ -0.38
LSMEM1-202ENST00000439068 SPDYE5A6NIY4 337 aa12.64□□□□□ -0.39
LSMEM1-202ENST00000439068 ADGRB2O60241 1585 aa12.64□□□□□ -0.39
LSMEM1-202ENST00000439068 ABCA3Q99758 1704 aa12.63□□□□□ -0.39
LSMEM1-202ENST00000439068 HRO43593 1189 aa12.63□□□□□ -0.39
LSMEM1-202ENST00000439068 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
LSMEM1-202ENST00000439068 LARP1Q6PKG0 1096 aaKnown RBP12.63□□□□□ -0.39
LSMEM1-202ENST00000439068 ACEP12821 1306 aa12.62□□□□□ -0.39
LSMEM1-202ENST00000439068 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
LSMEM1-202ENST00000439068 TRAK2O60296 914 aa12.62□□□□□ -0.39
LSMEM1-202ENST00000439068 MTMR14Q8NCE2 650 aa12.62□□□□□ -0.39
LSMEM1-202ENST00000439068 TRPM3Q9HCF6 1732 aaPredicted RBP12.62□□□□□ -0.39
LSMEM1-202ENST00000439068 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 ATP7BP35670 1465 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 APBB1O00213 710 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 GCP02774 474 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 SSH2Q76I76 1423 aa12.61□□□□□ -0.39
LSMEM1-202ENST00000439068 PLSCR1O15162 318 aa12.6□□□□□ -0.39
LSMEM1-202ENST00000439068 PRPF38BQ5VTL8 546 aaKnown RBP12.6□□□□□ -0.39
LSMEM1-202ENST00000439068 SYMPKQ92797 1274 aaKnown RBP12.6□□□□□ -0.39
LSMEM1-202ENST00000439068 THSD7AQ9UPZ6 1657 aa12.6□□□□□ -0.39
LSMEM1-202ENST00000439068 ADGRB1O14514 1584 aa12.6□□□□□ -0.39
LSMEM1-202ENST00000439068 CPDO75976 1380 aa12.59□□□□□ -0.39
LSMEM1-202ENST00000439068 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
LSMEM1-202ENST00000439068 PUS10Q3MIT2 529 aaKnown RBP12.59□□□□□ -0.39
LSMEM1-202ENST00000439068 LRCH3Q96II8 777 aa12.59□□□□□ -0.39
LSMEM1-202ENST00000439068 ARID3AQ99856 593 aa12.59□□□□□ -0.39
LSMEM1-202ENST00000439068 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.59□□□□□ -0.39
LSMEM1-202ENST00000439068 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
LSMEM1-202ENST00000439068 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
LSMEM1-202ENST00000439068 ZBTB7CA1YPR0 619 aa12.58□□□□□ -0.4
LSMEM1-202ENST00000439068 ATP6V1AP38606 617 aa12.58□□□□□ -0.4
LSMEM1-202ENST00000439068 DDB1Q16531 1140 aa12.58□□□□□ -0.4
LSMEM1-202ENST00000439068 RAD21O60216 631 aa12.57□□□□□ -0.4
LSMEM1-202ENST00000439068 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
LSMEM1-202ENST00000439068 ARXQ96QS3 562 aa12.57□□□□□ -0.4
LSMEM1-202ENST00000439068 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
LSMEM1-202ENST00000439068 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 USP17L8P0C7I0 530 aa12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 BCAMP50895 628 aa12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 CTDSPL2Q05D32 466 aa12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 GDPD2Q9HCC8 539 aa12.56□□□□□ -0.4
LSMEM1-202ENST00000439068 TNS1Q9HBL0 1735 aaKnown RBP12.55□□□□□ -0.4
LSMEM1-202ENST00000439068 GOLGA8CPA6NN73 597 aa12.55□□□□□ -0.4
LSMEM1-202ENST00000439068 CFAP99D6REC4 459 aa12.55□□□□□ -0.4
LSMEM1-202ENST00000439068 MTMR2Q13614 643 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms