RNA–Protein interactions for RNA: ENST00000438322.1

LINC00475-207, long intergenic non-protein coding RNA 475, humanhuman

TSL 3 BASIC

Gene LINC00475, Length 424 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-207ENST00000438322 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
LINC00475-207ENST00000438322 A0A0G2JLW4 131 aa13.95□□□□□ -0.18
LINC00475-207ENST00000438322 MCM10Q7L590 875 aa13.95□□□□□ -0.18
LINC00475-207ENST00000438322 KIAA1551Q9HCM1 1747 aa13.95□□□□□ -0.18
LINC00475-207ENST00000438322 COL15A1P39059 1388 aa13.95□□□□□ -0.18
LINC00475-207ENST00000438322 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
LINC00475-207ENST00000438322 BTBD11A6QL63 1104 aa13.94□□□□□ -0.18
LINC00475-207ENST00000438322 NEFMP07197 916 aa13.94□□□□□ -0.18
LINC00475-207ENST00000438322 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
LINC00475-207ENST00000438322 ZNF526Q8TF50 670 aaPredicted RBP13.94□□□□□ -0.18
LINC00475-207ENST00000438322 ZNF496Q96IT1 587 aaPredicted RBP13.94□□□□□ -0.18
LINC00475-207ENST00000438322 BCS1LQ9Y276 419 aa13.94□□□□□ -0.18
LINC00475-207ENST00000438322 SOS1Q07889 1333 aaPredicted RBP13.93□□□□□ -0.18
LINC00475-207ENST00000438322 C10orf71Q711Q0 1435 aa13.93□□□□□ -0.18
LINC00475-207ENST00000438322 AFDNP55196 1824 aaKnown RBP13.93□□□□□ -0.18
LINC00475-207ENST00000438322 KCNQ3O43525 872 aa13.93□□□□□ -0.18
LINC00475-207ENST00000438322 STARD3NLO95772 234 aa13.93□□□□□ -0.18
LINC00475-207ENST00000438322 DDR1Q08345 913 aa13.93□□□□□ -0.18
LINC00475-207ENST00000438322 ZNF790Q6PG37 636 aa13.93□□□□□ -0.18
LINC00475-207ENST00000438322 BICDL1Q6ZP65 573 aa13.93□□□□□ -0.18
LINC00475-207ENST00000438322 DPEP1P16444 411 aa13.92□□□□□ -0.18
LINC00475-207ENST00000438322 FCHSD2O94868 740 aa13.91□□□□□ -0.18
LINC00475-207ENST00000438322 PIP4K2AP48426 406 aaPredicted RBP13.91□□□□□ -0.18
LINC00475-207ENST00000438322 NPM2Q86SE8 214 aaKnown RBP13.91□□□□□ -0.18
LINC00475-207ENST00000438322 VSIG10Q8N0Z9 540 aa13.91□□□□□ -0.18
LINC00475-207ENST00000438322 FMNL2Q96PY5 1086 aa13.91□□□□□ -0.18
LINC00475-207ENST00000438322 PNNQ9H307 717 aaKnown RBP13.91□□□□□ -0.18
LINC00475-207ENST00000438322 HEG1Q9ULI3 1381 aa13.91□□□□□ -0.18
LINC00475-207ENST00000438322 BRCA1P38398 1863 aaKnown RBP13.91□□□□□ -0.18
LINC00475-207ENST00000438322 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00475-207ENST00000438322 ATP10DQ9P241 1426 aa13.9□□□□□ -0.19
LINC00475-207ENST00000438322 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.19
LINC00475-207ENST00000438322 CEMIPQ8WUJ3 1361 aa13.89□□□□□ -0.19
LINC00475-207ENST00000438322 GIGYF1O75420 1035 aaPredicted RBP13.89□□□□□ -0.19
LINC00475-207ENST00000438322 A1BGP04217 495 aa13.89□□□□□ -0.19
LINC00475-207ENST00000438322 CHRNA5P30532 468 aa13.89□□□□□ -0.19
LINC00475-207ENST00000438322 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
LINC00475-207ENST00000438322 NARFQ9UHQ1 456 aa13.89□□□□□ -0.19
LINC00475-207ENST00000438322 TBC1D2BQ9UPU7 963 aa13.89□□□□□ -0.19
LINC00475-207ENST00000438322 PRAMEF22A3QJZ6 481 aa13.88□□□□□ -0.19
LINC00475-207ENST00000438322 POLRMTO00411 1230 aaKnown RBP13.88□□□□□ -0.19
LINC00475-207ENST00000438322 TGFB2P61812 414 aa13.88□□□□□ -0.19
LINC00475-207ENST00000438322 NFIXQ14938 502 aa13.88□□□□□ -0.19
LINC00475-207ENST00000438322 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
LINC00475-207ENST00000438322 SCN7AQ01118 1682 aa13.88□□□□□ -0.19
LINC00475-207ENST00000438322 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
LINC00475-207ENST00000438322 NPHP1O15259 732 aa13.87□□□□□ -0.19
LINC00475-207ENST00000438322 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
LINC00475-207ENST00000438322 MRS2Q9HD23 443 aa13.87□□□□□ -0.19
LINC00475-207ENST00000438322 ARFGEF1Q9Y6D6 1849 aa13.87□□□□□ -0.19
LINC00475-207ENST00000438322 A0A087WZG4 1122 aa13.86□□□□□ -0.19
LINC00475-207ENST00000438322 SERPINB2P05120 415 aa13.86□□□□□ -0.19
LINC00475-207ENST00000438322 TM4SF1P30408 202 aa13.86□□□□□ -0.19
LINC00475-207ENST00000438322 CCDC24Q8N4L8 307 aa13.86□□□□□ -0.19
LINC00475-207ENST00000438322 THUMPD2Q9BTF0 503 aaKnown RBP13.86□□□□□ -0.19
LINC00475-207ENST00000438322 BCL2L12Q9HB09 334 aa13.86□□□□□ -0.19
LINC00475-207ENST00000438322 EIF5P55010 431 aaKnown RBP13.85□□□□□ -0.19
LINC00475-207ENST00000438322 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
LINC00475-207ENST00000438322 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
LINC00475-207ENST00000438322 PIM2Q9P1W9 311 aa13.85□□□□□ -0.19
LINC00475-207ENST00000438322 USP16Q9Y5T5 823 aa13.85□□□□□ -0.19
LINC00475-207ENST00000438322 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
LINC00475-207ENST00000438322 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
LINC00475-207ENST00000438322 KDM3BQ7LBC6 1761 aa13.84□□□□□ -0.19
LINC00475-207ENST00000438322 SENP3-EIF4A1A0A087X0R7 540 aa13.84□□□□□ -0.19
LINC00475-207ENST00000438322 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
LINC00475-207ENST00000438322 TBC1D9BQ66K14 1250 aa13.84□□□□□ -0.19
LINC00475-207ENST00000438322 CARMIL3Q8ND23 1372 aa13.83□□□□□ -0.19
LINC00475-207ENST00000438322 ANKRD31Q8N7Z5 1873 aa13.83□□□□□ -0.2
LINC00475-207ENST00000438322 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
LINC00475-207ENST00000438322 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
LINC00475-207ENST00000438322 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
LINC00475-207ENST00000438322 DZIP3Q86Y13 1208 aaKnown RBP13.83□□□□□ -0.2
LINC00475-207ENST00000438322 NGEFQ8N5V2 710 aa13.83□□□□□ -0.2
LINC00475-207ENST00000438322 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
LINC00475-207ENST00000438322 NRXN2Q9P2S2 1712 aa13.83□□□□□ -0.2
LINC00475-207ENST00000438322 DLEC1Q9Y238 1755 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 CCER2I3L3R5 266 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 HTATSF1O43719 755 aaKnown RBP13.82□□□□□ -0.2
LINC00475-207ENST00000438322 KCNA3P22001 575 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 C1QTNF8P60827 252 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 NEUROD2Q15784 382 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 CCDC146Q8IYE0 955 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 RRP7AQ9Y3A4 280 aaKnown RBP13.82□□□□□ -0.2
LINC00475-207ENST00000438322 CCDC88AQ3V6T2 1871 aa13.82□□□□□ -0.2
LINC00475-207ENST00000438322 COL11A2P13942 1736 aaPredicted RBP13.81□□□□□ -0.2
LINC00475-207ENST00000438322 FAM177BA6PVY3 158 aa13.81□□□□□ -0.2
LINC00475-207ENST00000438322 CCDC184Q52MB2 194 aa13.81□□□□□ -0.2
LINC00475-207ENST00000438322 PLEKHF1Q96S99 279 aa13.81□□□□□ -0.2
LINC00475-207ENST00000438322 ADAMTS8Q9UP79 889 aa13.81□□□□□ -0.2
LINC00475-207ENST00000438322 ADCY9O60503 1353 aa13.81□□□□□ -0.2
LINC00475-207ENST00000438322 MIER1Q8N108 512 aa13.8□□□□□ -0.2
LINC00475-207ENST00000438322 ZNF622Q969S3 477 aaKnown RBP eCLIP13.8□□□□□ -0.2
LINC00475-207ENST00000438322 SETDB2Q96T68 719 aa13.8□□□□□ -0.2
LINC00475-207ENST00000438322 SBF1O95248 1867 aa13.79□□□□□ -0.2
LINC00475-207ENST00000438322 H0YIN7 160 aa13.79□□□□□ -0.2
LINC00475-207ENST00000438322 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
LINC00475-207ENST00000438322 RIPK4P57078 832 aa13.79□□□□□ -0.2
LINC00475-207ENST00000438322 C9orf131Q5VYM1 1079 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms