RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 EXOSC9Q06265 439 aaKnown RBP12.59□□□□□ -0.39
CUBN-204ENST00000438254 MARCH10Q8NA82 808 aaPredicted RBP12.59□□□□□ -0.39
CUBN-204ENST00000438254 DDX54Q8TDD1 881 aaKnown RBP12.59□□□□□ -0.39
CUBN-204ENST00000438254 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
CUBN-204ENST00000438254 QTRT2Q9H974 415 aaKnown RBP12.59□□□□□ -0.39
CUBN-204ENST00000438254 RGS17Q9UGC6 210 aaPredicted RBP12.59□□□□□ -0.39
CUBN-204ENST00000438254 BCL9O00512 1426 aa12.59□□□□□ -0.39
CUBN-204ENST00000438254 ZNF772Q68DY9 489 aaPredicted RBP12.58□□□□□ -0.4
CUBN-204ENST00000438254 MIS18AQ9NYP9 233 aa12.58□□□□□ -0.4
CUBN-204ENST00000438254 TSPYL4Q9UJ04 414 aa12.58□□□□□ -0.4
CUBN-204ENST00000438254 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
CUBN-204ENST00000438254 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 VAMP4O75379 141 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 TEFQ10587 303 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 TSPYL6Q8N831 410 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 RCAN3Q9UKA8 241 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 DOT1LQ8TEK3 1739 aa12.57□□□□□ -0.4
CUBN-204ENST00000438254 ITGB4P16144 1822 aa12.56□□□□□ -0.4
CUBN-204ENST00000438254 KCNQ3O43525 872 aa12.56□□□□□ -0.4
CUBN-204ENST00000438254 PLCG2P16885 1265 aa12.56□□□□□ -0.4
CUBN-204ENST00000438254 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
CUBN-204ENST00000438254 NFATC2IPQ8NCF5 419 aa12.56□□□□□ -0.4
CUBN-204ENST00000438254 BTBD11A6QL63 1104 aa12.55□□□□□ -0.4
CUBN-204ENST00000438254 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
CUBN-204ENST00000438254 EIF4A1P60842 406 aaKnown RBP12.55□□□□□ -0.4
CUBN-204ENST00000438254 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
CUBN-204ENST00000438254 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
CUBN-204ENST00000438254 KCPQ6ZWJ8 1503 aa12.55□□□□□ -0.4
CUBN-204ENST00000438254 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
CUBN-204ENST00000438254 RBM6P78332 1123 aaKnown RBP12.54□□□□□ -0.4
CUBN-204ENST00000438254 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
CUBN-204ENST00000438254 BRPF1P55201 1214 aaPredicted RBP12.53□□□□□ -0.4
CUBN-204ENST00000438254 CABP4P57796 275 aa12.53□□□□□ -0.4
CUBN-204ENST00000438254 TWISTNBQ3B726 338 aaPredicted RBP12.53□□□□□ -0.4
CUBN-204ENST00000438254 CDAN1Q8IWY9 1227 aa12.53□□□□□ -0.4
CUBN-204ENST00000438254 SEPT12Q8IYM1 358 aa12.53□□□□□ -0.4
CUBN-204ENST00000438254 SUPT16HQ9Y5B9 1047 aaKnown RBP12.53□□□□□ -0.4
CUBN-204ENST00000438254 BRWD3Q6RI45 1802 aa12.53□□□□□ -0.4
CUBN-204ENST00000438254 HOXB7P09629 217 aa12.52□□□□□ -0.41
CUBN-204ENST00000438254 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
CUBN-204ENST00000438254 SLC39A6Q13433 755 aa12.52□□□□□ -0.41
CUBN-204ENST00000438254 ALDH1L2Q3SY69 923 aa12.52□□□□□ -0.41
CUBN-204ENST00000438254 PIGBQ92521 554 aa12.52□□□□□ -0.41
CUBN-204ENST00000438254 C5P01031 1676 aa12.51□□□□□ -0.41
CUBN-204ENST00000438254 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
CUBN-204ENST00000438254 GIGYF1O75420 1035 aaPredicted RBP12.51□□□□□ -0.41
CUBN-204ENST00000438254 BCAR3O75815 825 aa12.51□□□□□ -0.41
CUBN-204ENST00000438254 POTEAQ6S8J7 498 aa12.51□□□□□ -0.41
CUBN-204ENST00000438254 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
CUBN-204ENST00000438254 RRP1P56182 461 aaKnown RBP12.5□□□□□ -0.41
CUBN-204ENST00000438254 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
CUBN-204ENST00000438254 ZNF496Q96IT1 587 aaPredicted RBP12.5□□□□□ -0.41
CUBN-204ENST00000438254 ATG3Q9NT62 314 aa12.5□□□□□ -0.41
CUBN-204ENST00000438254 TMOD3Q9NYL9 352 aa12.5□□□□□ -0.41
CUBN-204ENST00000438254 RGS12O14924 1447 aa12.5□□□□□ -0.41
CUBN-204ENST00000438254 CICQ96RK0 1608 aaPredicted RBP12.5□□□□□ -0.41
CUBN-204ENST00000438254 SBF2Q86WG5 1849 aa12.5□□□□□ -0.41
CUBN-204ENST00000438254 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
CUBN-204ENST00000438254 PRIM1P49642 420 aaKnown RBP12.49□□□□□ -0.41
CUBN-204ENST00000438254 LAMB4A4D0S4 1761 aa12.48□□□□□ -0.41
CUBN-204ENST00000438254 ST18O60284 1047 aa12.48□□□□□ -0.41
CUBN-204ENST00000438254 MRPL50Q8N5N7 158 aaKnown RBP12.48□□□□□ -0.41
CUBN-204ENST00000438254 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
CUBN-204ENST00000438254 ASAP1Q9ULH1 1129 aa12.48□□□□□ -0.41
CUBN-204ENST00000438254 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
CUBN-204ENST00000438254 A0A0G2JS52 829 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 PRAMEF22A3QJZ6 481 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 KCNQ2O43526 872 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 RXRBP28702 533 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 MYT1Q01538 1121 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 FMNL2Q96PY5 1086 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 BCL2L13Q9BXK5 485 aa12.47□□□□□ -0.41
CUBN-204ENST00000438254 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 PTF1AQ7RTS3 328 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 KRT27Q7Z3Y8 459 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 TTC5Q8N0Z6 440 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 VSIG10Q8N0Z9 540 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 ACSBG1Q96GR2 724 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 SLC4A9Q96Q91 983 aa12.46□□□□□ -0.41
CUBN-204ENST00000438254 TJP1Q07157 1748 aa12.45□□□□□ -0.42
CUBN-204ENST00000438254 PLIN1O60240 522 aa12.45□□□□□ -0.42
CUBN-204ENST00000438254 SNRPA1P09661 255 aaKnown RBP12.45□□□□□ -0.42
CUBN-204ENST00000438254 FAM182BQ5T319 152 aa12.45□□□□□ -0.42
CUBN-204ENST00000438254 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
CUBN-204ENST00000438254 BTAF1O14981 1849 aa12.45□□□□□ -0.42
CUBN-204ENST00000438254 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
CUBN-204ENST00000438254 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
CUBN-204ENST00000438254 PDIA6Q15084 440 aa12.44□□□□□ -0.42
CUBN-204ENST00000438254 HDGFL1Q5TGJ6 251 aa12.44□□□□□ -0.42
CUBN-204ENST00000438254 CCDC30Q5VVM6 783 aa12.44□□□□□ -0.42
CUBN-204ENST00000438254 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
CUBN-204ENST00000438254 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
CUBN-204ENST00000438254 C20orf194Q5TEA3 1177 aa12.43□□□□□ -0.42
CUBN-204ENST00000438254 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
CUBN-204ENST00000438254 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
CUBN-204ENST00000438254 SYTL4Q96C24 671 aaPredicted RBP12.43□□□□□ -0.42
CUBN-204ENST00000438254 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
CUBN-204ENST00000438254 NOB1Q9ULX3 412 aaKnown RBP12.43□□□□□ -0.42
CUBN-204ENST00000438254 USP16Q9Y5T5 823 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms