RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TIAM2Q8IVF5 1701 aa17.44■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 INSRP06213 1382 aa17.43■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 NFKBIEO00221 500 aa17.42■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 CNTNAP4Q9C0A0 1308 aa17.42■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 POLRMTO00411 1230 aaKnown RBP17.41■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 SPG7Q9UQ90 795 aa17.41■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 PASKQ96RG2 1323 aa17.4■□□□□ 0.38
SMAD9-IT1-201ENST00000437983 COL5A3P25940 1745 aaPredicted RBP17.39■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 FYB1O15117 783 aa17.39■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 PHKG2P15735 406 aa17.39■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 USP42Q9H9J4 1324 aaKnown RBP17.39■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 VIRMAQ69YN4 1812 aaKnown RBP17.38■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 TM4SF1P30408 202 aa17.38■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 FLT4P35916 1363 aa17.37■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 IFNL2Q8IZJ0 200 aa17.36■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 NCAPD2Q15021 1401 aa17.36■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 TMEM88BA6NKF7 163 aa17.35■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 CRKLP46109 303 aaKnown RBP17.35■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 TTLL6Q8N841 843 aa17.35■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 SIN3AQ96ST3 1273 aa17.35■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 ZNF831Q5JPB2 1677 aa17.35■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 CARD11Q9BXL7 1154 aa17.34■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 EMILIN1Q9Y6C2 1016 aa17.34■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 TNRC18O15417 2968 aaPredicted RBP17.33■□□□□ 0.37
SMAD9-IT1-201ENST00000437983 ITGBL1O95965 494 aaPredicted RBP17.33■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.33■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 PLCB2Q00722 1185 aa17.32■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 CFAP44Q96MT7 982 aa17.32■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 EYA1Q99502 592 aa17.32■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 C2CD5Q86YS7 1000 aa17.31■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 TONSLQ96HA7 1378 aa17.3■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 NFIXQ14938 502 aa17.3■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 DEFB115Q30KQ5 88 aa17.3■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 LDHDQ86WU2 507 aa17.3■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 DLEC1Q9Y238 1755 aa17.3■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 ADAMTS7Q9UKP4 1686 aa17.29■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 WDR33Q9C0J8 1336 aaKnown RBP17.29■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 MAP2K1Q02750 393 aaPredicted RBP17.29■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 NEUROD1Q13562 356 aa17.29■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 INTS5Q6P9B9 1019 aaKnown RBP17.29■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 KIF24Q5T7B8 1368 aa17.28■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 CARMIL3Q8ND23 1372 aa17.28■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 ERVV-2B6SEH9 535 aa17.28■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 C21orf2O43822 256 aa17.28■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 TAF1DQ9H5J8 278 aaPredicted RBP17.28■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 PDE4DIPQ5VU43 2346 aa17.27■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 SERPINB2P05120 415 aa17.27■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 TSKSQ9UJT2 592 aa17.27■□□□□ 0.36
SMAD9-IT1-201ENST00000437983 DICER1Q9UPY3 1922 aaKnown RBP17.27■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 H0YIN7 160 aa17.26■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 ZPR1O75312 459 aa17.26■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 EAPPQ56P03 285 aaPredicted RBP17.26■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 NRXN2Q9P2S2 1712 aa17.26■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 TESK2Q96S53 571 aa17.25■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 CABP4P57796 275 aa17.24■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 ZNF622Q969S3 477 aaKnown RBP eCLIP17.24■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 MCOLN1Q9GZU1 580 aa17.24■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 TJP1Q07157 1748 aa17.24■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 FER1L6Q2WGJ9 1857 aa17.23■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 IQCA1LA6NCM1 817 aa17.23■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 DSG3P32926 999 aa17.23■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 ABT1Q9ULW3 272 aaKnown RBP17.23■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 MAP1SQ66K74 1059 aaPredicted RBP17.22■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 L3MBTL3Q96JM7 780 aaPredicted RBP17.22■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 SOS1Q07889 1333 aaPredicted RBP17.21■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 WASHC2AQ641Q2 1341 aa17.21■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 TAOK3Q9H2K8 898 aa17.21■□□□□ 0.35
SMAD9-IT1-201ENST00000437983 FMR1Q06787 632 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 GRM1Q13255 1194 aa17.2■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 DNAJC10Q8IXB1 793 aa17.2■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 NFATC2IPQ8NCF5 419 aa17.2■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 NARFQ9UHQ1 456 aa17.2■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 LTBP3Q9NS15 1303 aa17.2■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 KIF20BQ96Q89 1820 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ST20-MTHFSA0A0A6YYL1 179 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 CYP4F22Q6NT55 531 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 BICDL1Q6ZP65 573 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 CAPNS2Q96L46 248 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ADAMTSL1Q8N6G6 1762 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 SCN4AP35499 1836 aa17.19■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 GPR101Q96P66 508 aaPredicted RBP17.18■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 BEGAINQ9BUH8 593 aa17.18■□□□□ 0.34
SMAD9-IT1-201ENST00000437983 ZNF541Q9H0D2 1346 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms