RNA–Protein interactions for RNA: ENST00000437944.5

SCRN3-206, Transcript of secernin 3, humanhuman

TSL 2

Gene SCRN3, Length 1,141 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-206ENST00000437944 HOXB7P09629 217 aa16.06■□□□□ 0.16
SCRN3-206ENST00000437944 KRT24Q2M2I5 525 aa16.06■□□□□ 0.16
SCRN3-206ENST00000437944 TWISTNBQ3B726 338 aaPredicted RBP16.06■□□□□ 0.16
SCRN3-206ENST00000437944 PTF1AQ7RTS3 328 aa16.06■□□□□ 0.16
SCRN3-206ENST00000437944 TSPYL6Q8N831 410 aa16.06■□□□□ 0.16
SCRN3-206ENST00000437944 ZNF428Q96B54 188 aa16.06■□□□□ 0.16
SCRN3-206ENST00000437944 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
SCRN3-206ENST00000437944 CICQ96RK0 1608 aaPredicted RBP16.05■□□□□ 0.16
SCRN3-206ENST00000437944 GIGYF1O75420 1035 aaPredicted RBP16.05■□□□□ 0.16
SCRN3-206ENST00000437944 TNS1Q9HBL0 1735 aaKnown RBP16.05■□□□□ 0.16
SCRN3-206ENST00000437944 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
SCRN3-206ENST00000437944 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
SCRN3-206ENST00000437944 TRIM37O94972 964 aa16.04■□□□□ 0.16
SCRN3-206ENST00000437944 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
SCRN3-206ENST00000437944 VSIG10Q8N0Z9 540 aa16.04■□□□□ 0.16
SCRN3-206ENST00000437944 PTCD1O75127 700 aaKnown RBP16.03■□□□□ 0.16
SCRN3-206ENST00000437944 CHMP4AQ9BY43 222 aa16.03■□□□□ 0.16
SCRN3-206ENST00000437944 TJP1Q07157 1748 aa16.02■□□□□ 0.16
SCRN3-206ENST00000437944 TEX13AQ9BXU3 409 aaPredicted RBP16.02■□□□□ 0.16
SCRN3-206ENST00000437944 RGPD3A6NKT7 1758 aaPredicted RBP16.01■□□□□ 0.15
SCRN3-206ENST00000437944 RGPD4Q7Z3J3 1758 aa16.01■□□□□ 0.15
SCRN3-206ENST00000437944 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
SCRN3-206ENST00000437944 RCAN3Q9UKA8 241 aa16.01■□□□□ 0.15
SCRN3-206ENST00000437944 LOC102724428A0A0B4J2F2 783 aa16■□□□□ 0.15
SCRN3-206ENST00000437944 RARSP54136 660 aaKnown RBP16■□□□□ 0.15
SCRN3-206ENST00000437944 SIK1P57059 783 aa16■□□□□ 0.15
SCRN3-206ENST00000437944 ALDH1L2Q3SY69 923 aa16■□□□□ 0.15
SCRN3-206ENST00000437944 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
SCRN3-206ENST00000437944 TAF1LQ8IZX4 1826 aa15.99■□□□□ 0.15
SCRN3-206ENST00000437944 PRAMEF22A3QJZ6 481 aa15.99■□□□□ 0.15
SCRN3-206ENST00000437944 HDGFL1Q5TGJ6 251 aa15.99■□□□□ 0.15
SCRN3-206ENST00000437944 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
SCRN3-206ENST00000437944 PLCD3Q8N3E9 789 aa15.99■□□□□ 0.15
SCRN3-206ENST00000437944 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
SCRN3-206ENST00000437944 PLSCR1O15162 318 aa15.98■□□□□ 0.15
SCRN3-206ENST00000437944 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
SCRN3-206ENST00000437944 SSH1Q8WYL5 1049 aa15.98■□□□□ 0.15
SCRN3-206ENST00000437944 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
SCRN3-206ENST00000437944 APBA3O96018 575 aa15.97■□□□□ 0.15
SCRN3-206ENST00000437944 EIF2S2P20042 333 aaKnown RBP15.97■□□□□ 0.15
SCRN3-206ENST00000437944 ATP6V1AP38606 617 aa15.97■□□□□ 0.15
SCRN3-206ENST00000437944 BRPF1P55201 1214 aaPredicted RBP15.97■□□□□ 0.15
SCRN3-206ENST00000437944 ERBB4Q15303 1308 aa15.96■□□□□ 0.15
SCRN3-206ENST00000437944 RREB1Q92766 1687 aa15.96■□□□□ 0.15
SCRN3-206ENST00000437944 STARD3NLO95772 234 aa15.96■□□□□ 0.15
SCRN3-206ENST00000437944 EP400Q96L91 3159 aa15.95■□□□□ 0.14
SCRN3-206ENST00000437944 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
SCRN3-206ENST00000437944 CYP19A1P11511 503 aaPredicted RBP15.95■□□□□ 0.14
SCRN3-206ENST00000437944 ITPK1Q13572 414 aa15.95■□□□□ 0.14
SCRN3-206ENST00000437944 SLC27A3Q5K4L6 730 aa15.95■□□□□ 0.14
SCRN3-206ENST00000437944 MRPL50Q8N5N7 158 aaKnown RBP15.95■□□□□ 0.14
SCRN3-206ENST00000437944 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
SCRN3-206ENST00000437944 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
SCRN3-206ENST00000437944 DBF4Q9UBU7 674 aaPredicted RBP15.95■□□□□ 0.14
SCRN3-206ENST00000437944 CCNL1Q9UK58 526 aaPredicted RBP15.95■□□□□ 0.14
SCRN3-206ENST00000437944 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
SCRN3-206ENST00000437944 BCAR3O75815 825 aa15.94■□□□□ 0.14
SCRN3-206ENST00000437944 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
SCRN3-206ENST00000437944 CCDC125Q86Z20 511 aa15.94■□□□□ 0.14
SCRN3-206ENST00000437944 NECTIN2Q92692 538 aa15.94■□□□□ 0.14
SCRN3-206ENST00000437944 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
SCRN3-206ENST00000437944 PDIA6Q15084 440 aa15.93■□□□□ 0.14
SCRN3-206ENST00000437944 SPOCK2Q92563 424 aa15.93■□□□□ 0.14
SCRN3-206ENST00000437944 BCL2L13Q9BXK5 485 aa15.93■□□□□ 0.14
SCRN3-206ENST00000437944 CHPF2Q9P2E5 772 aa15.93■□□□□ 0.14
SCRN3-206ENST00000437944 CLEC11AQ9Y240 323 aa15.93■□□□□ 0.14
SCRN3-206ENST00000437944 RNF123Q5XPI4 1314 aa15.93■□□□□ 0.14
SCRN3-206ENST00000437944 SF3B2Q13435 895 aaKnown RBP15.92■□□□□ 0.14
SCRN3-206ENST00000437944 TXNRD1Q16881 649 aa15.92■□□□□ 0.14
SCRN3-206ENST00000437944 HYPKQ9NX55 129 aa15.92■□□□□ 0.14
SCRN3-206ENST00000437944 KIF16BQ96L93 1317 aa15.92■□□□□ 0.14
SCRN3-206ENST00000437944 CNTNAP4Q9C0A0 1308 aa15.92■□□□□ 0.14
SCRN3-206ENST00000437944 NBPF26B4DH59 902 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 A1BGP04217 495 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
SCRN3-206ENST00000437944 NBPF14Q5TI25 921 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 NBPF10Q6P3W6 841 aaKnown RBP15.91■□□□□ 0.14
SCRN3-206ENST00000437944 NBPF15Q8N660 670 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 LINC00116Q8NCU8 138 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 LRRC4BQ9NT99 713 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
SCRN3-206ENST00000437944 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
SCRN3-206ENST00000437944 BAG6P46379 1132 aa15.9■□□□□ 0.14
SCRN3-206ENST00000437944 KCNQ4P56696 695 aa15.9■□□□□ 0.14
SCRN3-206ENST00000437944 PROSER3Q2NL68 480 aa15.9■□□□□ 0.14
SCRN3-206ENST00000437944 INTS5Q6P9B9 1019 aaKnown RBP15.9■□□□□ 0.14
SCRN3-206ENST00000437944 LRP10Q7Z4F1 713 aa15.9■□□□□ 0.14
SCRN3-206ENST00000437944 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.9■□□□□ 0.14
SCRN3-206ENST00000437944 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
SCRN3-206ENST00000437944 CCDC87Q9NVE4 849 aa15.9■□□□□ 0.14
SCRN3-206ENST00000437944 SUPT16HQ9Y5B9 1047 aaKnown RBP15.9■□□□□ 0.14
SCRN3-206ENST00000437944 IPO8O15397 1037 aaKnown RBP15.89■□□□□ 0.13
SCRN3-206ENST00000437944 G2E3Q7L622 706 aa15.89■□□□□ 0.13
SCRN3-206ENST00000437944 KLHL34Q8N239 644 aa15.89■□□□□ 0.13
SCRN3-206ENST00000437944 ARHGAP45Q92619 1136 aa15.89■□□□□ 0.13
SCRN3-206ENST00000437944 CAMKK2Q96RR4 588 aa15.89■□□□□ 0.13
SCRN3-206ENST00000437944 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
SCRN3-206ENST00000437944 PTPRCP08575 1304 aa15.89■□□□□ 0.13
SCRN3-206ENST00000437944 ANXA1P04083 346 aa15.88■□□□□ 0.13
SCRN3-206ENST00000437944 MYL6BP14649 208 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms