RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 KRT24Q2M2I5 525 aa17.34■□□□□ 0.37
EXT1-203ENST00000437196 RC3H1Q5TC82 1133 aaKnown RBP17.34■□□□□ 0.37
EXT1-203ENST00000437196 NPM2Q86SE8 214 aaKnown RBP17.34■□□□□ 0.37
EXT1-203ENST00000437196 CNTNAP4Q9C0A0 1308 aa17.34■□□□□ 0.37
EXT1-203ENST00000437196 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
EXT1-203ENST00000437196 USP16Q9Y5T5 823 aa17.34■□□□□ 0.37
EXT1-203ENST00000437196 CACNA1FO60840 1977 aa17.33■□□□□ 0.37
EXT1-203ENST00000437196 RREB1Q92766 1687 aa17.33■□□□□ 0.37
EXT1-203ENST00000437196 VAMP4O75379 141 aa17.33■□□□□ 0.36
EXT1-203ENST00000437196 EIF2S2P20042 333 aaKnown RBP17.33■□□□□ 0.36
EXT1-203ENST00000437196 TSPYL6Q8N831 410 aa17.33■□□□□ 0.36
EXT1-203ENST00000437196 STK31Q9BXU1 1019 aa17.33■□□□□ 0.36
EXT1-203ENST00000437196 NBPF14Q5TI25 921 aa17.32■□□□□ 0.36
EXT1-203ENST00000437196 AK7Q96M32 723 aa17.32■□□□□ 0.36
EXT1-203ENST00000437196 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
EXT1-203ENST00000437196 DBF4Q9UBU7 674 aaPredicted RBP17.32■□□□□ 0.36
EXT1-203ENST00000437196 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
EXT1-203ENST00000437196 CRKLP46109 303 aaKnown RBP17.31■□□□□ 0.36
EXT1-203ENST00000437196 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
EXT1-203ENST00000437196 C4BP0C0L5 1744 aa17.31■□□□□ 0.36
EXT1-203ENST00000437196 KCNQ4P56696 695 aa17.3■□□□□ 0.36
EXT1-203ENST00000437196 ALDH1L2Q3SY69 923 aa17.3■□□□□ 0.36
EXT1-203ENST00000437196 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
EXT1-203ENST00000437196 STK32BQ9NY57 414 aa17.3■□□□□ 0.36
EXT1-203ENST00000437196 NUP188Q5SRE5 1749 aa17.29■□□□□ 0.36
EXT1-203ENST00000437196 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
EXT1-203ENST00000437196 FLAD1Q8NFF5 587 aa17.29■□□□□ 0.36
EXT1-203ENST00000437196 HYPKQ9NX55 129 aa17.29■□□□□ 0.36
EXT1-203ENST00000437196 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
EXT1-203ENST00000437196 MYH14Q7Z406 1995 aaKnown RBP17.28■□□□□ 0.36
EXT1-203ENST00000437196 SOCS7O14512 581 aa17.28■□□□□ 0.36
EXT1-203ENST00000437196 RPS6KA4O75676 772 aa17.28■□□□□ 0.36
EXT1-203ENST00000437196 A1BGP04217 495 aa17.28■□□□□ 0.36
EXT1-203ENST00000437196 ADRA2BP18089 450 aa17.28■□□□□ 0.36
EXT1-203ENST00000437196 INTS5Q6P9B9 1019 aaKnown RBP17.28■□□□□ 0.36
EXT1-203ENST00000437196 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
EXT1-203ENST00000437196 A0A087WZG4 1122 aa17.27■□□□□ 0.35
EXT1-203ENST00000437196 GNPATO15228 680 aa17.27■□□□□ 0.35
EXT1-203ENST00000437196 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.35
EXT1-203ENST00000437196 NECTIN2Q92692 538 aa17.27■□□□□ 0.35
EXT1-203ENST00000437196 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.35
EXT1-203ENST00000437196 ZBTB1Q9Y2K1 713 aa17.27■□□□□ 0.35
EXT1-203ENST00000437196 SSFA2P28290 1259 aa17.26■□□□□ 0.35
EXT1-203ENST00000437196 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
EXT1-203ENST00000437196 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
EXT1-203ENST00000437196 MYL6BP14649 208 aa17.25■□□□□ 0.35
EXT1-203ENST00000437196 SLC15A2Q16348 729 aa17.25■□□□□ 0.35
EXT1-203ENST00000437196 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
EXT1-203ENST00000437196 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
EXT1-203ENST00000437196 EIF5P55010 431 aaKnown RBP17.24■□□□□ 0.35
EXT1-203ENST00000437196 TRAPPC3LQ5T215 181 aa17.24■□□□□ 0.35
EXT1-203ENST00000437196 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
EXT1-203ENST00000437196 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
EXT1-203ENST00000437196 PDIA6Q15084 440 aa17.23■□□□□ 0.35
EXT1-203ENST00000437196 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
EXT1-203ENST00000437196 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
EXT1-203ENST00000437196 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
EXT1-203ENST00000437196 COL15A1P39059 1388 aa17.22■□□□□ 0.35
EXT1-203ENST00000437196 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
EXT1-203ENST00000437196 BRPF1P55201 1214 aaPredicted RBP17.22■□□□□ 0.35
EXT1-203ENST00000437196 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
EXT1-203ENST00000437196 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
EXT1-203ENST00000437196 QSER1Q2KHR3 1735 aa17.22■□□□□ 0.35
EXT1-203ENST00000437196 KIF16BQ96L93 1317 aa17.22■□□□□ 0.35
EXT1-203ENST00000437196 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
EXT1-203ENST00000437196 CENPBP07199 599 aaPredicted RBP17.21■□□□□ 0.35
EXT1-203ENST00000437196 RFC4P35249 363 aa17.21■□□□□ 0.35
EXT1-203ENST00000437196 ZNF827Q17R98 1081 aa17.21■□□□□ 0.35
EXT1-203ENST00000437196 KIF6Q6ZMV9 814 aa17.21■□□□□ 0.35
EXT1-203ENST00000437196 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.34
EXT1-203ENST00000437196 PTPRCP08575 1304 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
EXT1-203ENST00000437196 RGL2O15211 777 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
EXT1-203ENST00000437196 ZPR1O75312 459 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 PHF14O94880 888 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 FLIIQ13045 1269 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 PROSER3Q2NL68 480 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 COPS6Q7L5N1 327 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 DZIP3Q86Y13 1208 aaKnown RBP17.2■□□□□ 0.34
EXT1-203ENST00000437196 MRPL50Q8N5N7 158 aaKnown RBP17.2■□□□□ 0.34
EXT1-203ENST00000437196 ARXQ96QS3 562 aa17.2■□□□□ 0.34
EXT1-203ENST00000437196 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
EXT1-203ENST00000437196 ANXA1P04083 346 aa17.19■□□□□ 0.34
EXT1-203ENST00000437196 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
EXT1-203ENST00000437196 XAGE3Q8WTP9 111 aa17.19■□□□□ 0.34
EXT1-203ENST00000437196 ARHGEF1Q92888 912 aaKnown RBP17.19■□□□□ 0.34
EXT1-203ENST00000437196 BCL2L13Q9BXK5 485 aa17.19■□□□□ 0.34
EXT1-203ENST00000437196 ZNF652Q9Y2D9 606 aa17.19■□□□□ 0.34
EXT1-203ENST00000437196 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
EXT1-203ENST00000437196 MSH5O43196 834 aa17.18■□□□□ 0.34
EXT1-203ENST00000437196 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
EXT1-203ENST00000437196 FKBP5Q13451 457 aaPredicted RBP17.18■□□□□ 0.34
EXT1-203ENST00000437196 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.18■□□□□ 0.34
EXT1-203ENST00000437196 PHAXQ9H814 394 aaKnown RBP17.18■□□□□ 0.34
EXT1-203ENST00000437196 NARFQ9UHQ1 456 aa17.18■□□□□ 0.34
EXT1-203ENST00000437196 TUBGCP6Q96RT7 1819 aa17.18■□□□□ 0.34
EXT1-203ENST00000437196 ANKRD13DQ6ZTN6 518 aa17.17■□□□□ 0.34
EXT1-203ENST00000437196 PLBD2Q8NHP8 589 aa17.17■□□□□ 0.34
EXT1-203ENST00000437196 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms