RNA–Protein interactions for RNA: ENST00000436630.6

RPE-208, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 1,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-208ENST00000436630 MRPL50Q8N5N7 158 aaKnown RBP17.16■□□□□ 0.34
RPE-208ENST00000436630 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
RPE-208ENST00000436630 EP400Q96L91 3159 aa17.16■□□□□ 0.34
RPE-208ENST00000436630 PTPRCP08575 1304 aa17.16■□□□□ 0.34
RPE-208ENST00000436630 N4BP2Q86UW6 1770 aaPredicted RBP17.15■□□□□ 0.34
RPE-208ENST00000436630 TAF1LQ8IZX4 1826 aa17.15■□□□□ 0.34
RPE-208ENST00000436630 BCAR3O75815 825 aa17.15■□□□□ 0.34
RPE-208ENST00000436630 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
RPE-208ENST00000436630 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
RPE-208ENST00000436630 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
RPE-208ENST00000436630 ZKSCAN2Q63HK3 967 aa17.14■□□□□ 0.33
RPE-208ENST00000436630 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
RPE-208ENST00000436630 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
RPE-208ENST00000436630 TRIM37O94972 964 aa17.13■□□□□ 0.33
RPE-208ENST00000436630 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
RPE-208ENST00000436630 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
RPE-208ENST00000436630 PRAMEF22A3QJZ6 481 aa17.12■□□□□ 0.33
RPE-208ENST00000436630 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
RPE-208ENST00000436630 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
RPE-208ENST00000436630 API5Q9BZZ5 524 aaKnown RBP17.12■□□□□ 0.33
RPE-208ENST00000436630 ATP6V1AP38606 617 aa17.11■□□□□ 0.33
RPE-208ENST00000436630 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
RPE-208ENST00000436630 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
RPE-208ENST00000436630 DNAJC10Q8IXB1 793 aa17.11■□□□□ 0.33
RPE-208ENST00000436630 USP16Q9Y5T5 823 aa17.11■□□□□ 0.33
RPE-208ENST00000436630 FLIIQ13045 1269 aa17.1■□□□□ 0.33
RPE-208ENST00000436630 PTF1AQ7RTS3 328 aa17.1■□□□□ 0.33
RPE-208ENST00000436630 NECTIN2Q92692 538 aa17.1■□□□□ 0.33
RPE-208ENST00000436630 FRAT1Q92837 279 aaPredicted RBP17.1■□□□□ 0.33
RPE-208ENST00000436630 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
RPE-208ENST00000436630 NOB1Q9ULX3 412 aaKnown RBP17.1■□□□□ 0.33
RPE-208ENST00000436630 PLSCR1O15162 318 aa17.09■□□□□ 0.33
RPE-208ENST00000436630 CYP19A1P11511 503 aaPredicted RBP17.09■□□□□ 0.33
RPE-208ENST00000436630 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
RPE-208ENST00000436630 CCNL1Q9UK58 526 aaPredicted RBP17.09■□□□□ 0.33
RPE-208ENST00000436630 CNTNAP4Q9C0A0 1308 aa17.09■□□□□ 0.33
RPE-208ENST00000436630 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
RPE-208ENST00000436630 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
RPE-208ENST00000436630 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
RPE-208ENST00000436630 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
RPE-208ENST00000436630 ARFGEF2Q9Y6D5 1785 aa17.07■□□□□ 0.32
RPE-208ENST00000436630 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
RPE-208ENST00000436630 ABCC4O15439 1325 aa17.07■□□□□ 0.32
RPE-208ENST00000436630 TRIM27P14373 513 aa17.07■□□□□ 0.32
RPE-208ENST00000436630 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
RPE-208ENST00000436630 PDIA6Q15084 440 aa17.07■□□□□ 0.32
RPE-208ENST00000436630 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
RPE-208ENST00000436630 ITPK1Q13572 414 aa17.06■□□□□ 0.32
RPE-208ENST00000436630 RC3H1Q5TC82 1133 aaKnown RBP17.06■□□□□ 0.32
RPE-208ENST00000436630 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
RPE-208ENST00000436630 PLIN1O60240 522 aa17.05■□□□□ 0.32
RPE-208ENST00000436630 APBA3O96018 575 aa17.05■□□□□ 0.32
RPE-208ENST00000436630 IL6STP40189 918 aaPredicted RBP17.05■□□□□ 0.32
RPE-208ENST00000436630 SF3B2Q13435 895 aaKnown RBP17.05■□□□□ 0.32
RPE-208ENST00000436630 PROSER3Q2NL68 480 aa17.05■□□□□ 0.32
RPE-208ENST00000436630 ERICH6BQ5W0A0 696 aa17.05■□□□□ 0.32
RPE-208ENST00000436630 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
RPE-208ENST00000436630 NPM2Q86SE8 214 aaKnown RBP17.05■□□□□ 0.32
RPE-208ENST00000436630 NBPF26B4DH59 902 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 A1BGP04217 495 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 MYL6BP14649 208 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
RPE-208ENST00000436630 NBPF14Q5TI25 921 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 NBPF10Q6P3W6 841 aaKnown RBP17.04■□□□□ 0.32
RPE-208ENST00000436630 G2E3Q7L622 706 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 CCDC125Q86Z20 511 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 NBPF15Q8N660 670 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 ATP10DQ9P241 1426 aa17.04■□□□□ 0.32
RPE-208ENST00000436630 BCORQ6W2J9 1755 aa17.03■□□□□ 0.32
RPE-208ENST00000436630 LINC00116Q8NCU8 138 aa17.03■□□□□ 0.32
RPE-208ENST00000436630 CHMP4BQ9H444 224 aaKnown RBP17.03■□□□□ 0.32
RPE-208ENST00000436630 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
RPE-208ENST00000436630 UBR3Q6ZT12 1888 aa17.03■□□□□ 0.32
RPE-208ENST00000436630 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
RPE-208ENST00000436630 ANKRD36CQ5JPF3 1778 aa17.02■□□□□ 0.32
RPE-208ENST00000436630 SCN7AQ01118 1682 aa17.02■□□□□ 0.32
RPE-208ENST00000436630 ANXA1P04083 346 aa17.02■□□□□ 0.32
RPE-208ENST00000436630 CCT4P50991 539 aaKnown RBP17.02■□□□□ 0.32
RPE-208ENST00000436630 AAMPQ13685 434 aa17.02■□□□□ 0.32
RPE-208ENST00000436630 INTS5Q6P9B9 1019 aaKnown RBP17.02■□□□□ 0.32
RPE-208ENST00000436630 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.32
RPE-208ENST00000436630 PHAXQ9H814 394 aaKnown RBP17.02■□□□□ 0.32
RPE-208ENST00000436630 ADCY9O60503 1353 aa17.02■□□□□ 0.31
RPE-208ENST00000436630 A0A087WZG4 1122 aa17.01■□□□□ 0.31
RPE-208ENST00000436630 BAG6P46379 1132 aa17.01■□□□□ 0.31
RPE-208ENST00000436630 TXNRD1Q16881 649 aa17.01■□□□□ 0.31
RPE-208ENST00000436630 KSR2Q6VAB6 950 aa17.01■□□□□ 0.31
RPE-208ENST00000436630 KIF6Q6ZMV9 814 aa17.01■□□□□ 0.31
RPE-208ENST00000436630 COL15A1P39059 1388 aa17.01■□□□□ 0.31
RPE-208ENST00000436630 RGL2O15211 777 aa17■□□□□ 0.31
RPE-208ENST00000436630 EIF5P55010 431 aaKnown RBP17■□□□□ 0.31
RPE-208ENST00000436630 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
RPE-208ENST00000436630 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
RPE-208ENST00000436630 COPS6Q7L5N1 327 aa17■□□□□ 0.31
RPE-208ENST00000436630 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
RPE-208ENST00000436630 DNAAF4Q8WXU2 420 aa17■□□□□ 0.31
RPE-208ENST00000436630 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
RPE-208ENST00000436630 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
RPE-208ENST00000436630 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
RPE-208ENST00000436630 AFDNP55196 1824 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms