RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 CHMP4BQ9H444 224 aaKnown RBP13.59□□□□□ -0.23
LINC01516-201ENST00000436140 KIF1AQ12756 1690 aa13.58□□□□□ -0.23
LINC01516-201ENST00000436140 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 AAMPQ13685 434 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
LINC01516-201ENST00000436140 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 SURF6O75683 361 aaKnown RBP13.58□□□□□ -0.24
LINC01516-201ENST00000436140 PDIA6Q15084 440 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 PPP1R42Q7Z4L9 355 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 PIGBQ92521 554 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.24
LINC01516-201ENST00000436140 PA2G4Q9UQ80 394 aaKnown RBP13.58□□□□□ -0.24
LINC01516-201ENST00000436140 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
LINC01516-201ENST00000436140 ALS2Q96Q42 1657 aa13.57□□□□□ -0.24
LINC01516-201ENST00000436140 COL5A2P05997 1499 aaPredicted RBP13.57□□□□□ -0.24
LINC01516-201ENST00000436140 TTLL7Q6ZT98 887 aa13.57□□□□□ -0.24
LINC01516-201ENST00000436140 SIL1Q9H173 461 aa13.57□□□□□ -0.24
LINC01516-201ENST00000436140 HSP90AB1P08238 724 aaKnown RBP13.57□□□□□ -0.24
LINC01516-201ENST00000436140 BEND3Q5T5X7 828 aa13.57□□□□□ -0.24
LINC01516-201ENST00000436140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC01516-201ENST00000436140 MAP4K4O95819 1239 aaPredicted RBP13.56□□□□□ -0.24
LINC01516-201ENST00000436140 OS9Q13438 667 aaPredicted RBP13.56□□□□□ -0.24
LINC01516-201ENST00000436140 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 DDX21Q9NR30 783 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC01516-201ENST00000436140 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 RPAP2Q8IXW5 612 aaPredicted RBP13.56□□□□□ -0.24
LINC01516-201ENST00000436140 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 CHMP3Q9Y3E7 222 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 FAM177BA6PVY3 158 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 GNAI3P08754 354 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 NBR1Q14596 966 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 KSR2Q6VAB6 950 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
LINC01516-201ENST00000436140 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
LINC01516-201ENST00000436140 NBPF14Q5TI25 921 aa13.55□□□□□ -0.24
LINC01516-201ENST00000436140 NBPF10Q6P3W6 841 aaKnown RBP13.55□□□□□ -0.24
LINC01516-201ENST00000436140 ANKRD13DQ6ZTN6 518 aa13.55□□□□□ -0.24
LINC01516-201ENST00000436140 NBPF15Q8N660 670 aa13.55□□□□□ -0.24
LINC01516-201ENST00000436140 IPO9Q96P70 1041 aaKnown RBP13.55□□□□□ -0.24
LINC01516-201ENST00000436140 ADCY9O60503 1353 aa13.54□□□□□ -0.24
LINC01516-201ENST00000436140 GOLGB1Q14789 3259 aaKnown RBP13.54□□□□□ -0.24
LINC01516-201ENST00000436140 KCNQ2O43526 872 aa13.54□□□□□ -0.24
LINC01516-201ENST00000436140 HYPKQ9NX55 129 aa13.54□□□□□ -0.24
LINC01516-201ENST00000436140 DDB1Q16531 1140 aa13.54□□□□□ -0.24
LINC01516-201ENST00000436140 HMMRO75330 724 aa13.53□□□□□ -0.24
LINC01516-201ENST00000436140 DAXXQ9UER7 740 aaPredicted RBP13.53□□□□□ -0.24
LINC01516-201ENST00000436140 DDX58O95786 925 aaKnown RBP13.53□□□□□ -0.24
LINC01516-201ENST00000436140 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
LINC01516-201ENST00000436140 PTF1AQ7RTS3 328 aa13.53□□□□□ -0.24
LINC01516-201ENST00000436140 UBE3BQ7Z3V4 1068 aa13.53□□□□□ -0.24
LINC01516-201ENST00000436140 ATP8B2P98198 1209 aa13.52□□□□□ -0.24
LINC01516-201ENST00000436140 PLEKHM2Q8IWE5 1019 aa13.52□□□□□ -0.24
LINC01516-201ENST00000436140 GPTP24298 496 aa13.52□□□□□ -0.25
LINC01516-201ENST00000436140 NEXNQ0ZGT2 675 aa13.52□□□□□ -0.25
LINC01516-201ENST00000436140 MEX3CQ5U5Q3 659 aaKnown RBP13.52□□□□□ -0.25
LINC01516-201ENST00000436140 RILPL2Q969X0 211 aa13.51□□□□□ -0.25
LINC01516-201ENST00000436140 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
LINC01516-201ENST00000436140 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
LINC01516-201ENST00000436140 NOP58Q9Y2X3 529 aaKnown RBP13.51□□□□□ -0.25
LINC01516-201ENST00000436140 EP400Q96L91 3159 aa13.51□□□□□ -0.25
LINC01516-201ENST00000436140 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
LINC01516-201ENST00000436140 OVOS2A0A0G2JMS6 1433 aa13.51□□□□□ -0.25
LINC01516-201ENST00000436140 TRIM6-TRIM34B2RNG4 842 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 HOXB7P09629 217 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
LINC01516-201ENST00000436140 SOS1Q07889 1333 aaPredicted RBP13.5□□□□□ -0.25
LINC01516-201ENST00000436140 A0A087WZG4 1122 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 ERVV-2B6SEH9 535 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
LINC01516-201ENST00000436140 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 HSPA1LP34931 641 aa13.5□□□□□ -0.25
LINC01516-201ENST00000436140 PHRF1Q9P1Y6 1649 aaKnown RBP13.49□□□□□ -0.25
LINC01516-201ENST00000436140 ATP10DQ9P241 1426 aa13.49□□□□□ -0.25
LINC01516-201ENST00000436140 ROBO1Q9Y6N7 1651 aa13.49□□□□□ -0.25
LINC01516-201ENST00000436140 GRM8O00222 908 aa13.49□□□□□ -0.25
LINC01516-201ENST00000436140 MARCH10Q8NA82 808 aaPredicted RBP13.49□□□□□ -0.25
LINC01516-201ENST00000436140 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
LINC01516-201ENST00000436140 SLC4A9Q96Q91 983 aa13.49□□□□□ -0.25
LINC01516-201ENST00000436140 LRRCC1Q9C099 1032 aa13.49□□□□□ -0.25
LINC01516-201ENST00000436140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
LINC01516-201ENST00000436140 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
LINC01516-201ENST00000436140 NCAPD2Q15021 1401 aa13.48□□□□□ -0.25
LINC01516-201ENST00000436140 COL18A1P39060 1754 aa13.48□□□□□ -0.25
LINC01516-201ENST00000436140 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
LINC01516-201ENST00000436140 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
LINC01516-201ENST00000436140 TBC1D9Q6ZT07 1266 aa13.47□□□□□ -0.25
LINC01516-201ENST00000436140 CCDC8Q9H0W5 538 aaPredicted RBP13.47□□□□□ -0.25
LINC01516-201ENST00000436140 USP21Q9UK80 565 aa13.47□□□□□ -0.25
LINC01516-201ENST00000436140 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
LINC01516-201ENST00000436140 SDSP20132 328 aa13.46□□□□□ -0.25
LINC01516-201ENST00000436140 GCKRQ14397 625 aa13.46□□□□□ -0.25
LINC01516-201ENST00000436140 METTL22Q9BUU2 404 aaPredicted RBP13.46□□□□□ -0.25
LINC01516-201ENST00000436140 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
LINC01516-201ENST00000436140 SPATA31A1Q5TZJ5 1347 aa13.46□□□□□ -0.25
LINC01516-201ENST00000436140 FAM89AQ96GI7 184 aa13.46□□□□□ -0.26
LINC01516-201ENST00000436140 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms