RNA–Protein interactions for RNA: ENST00000436041.5

PRAMEF27-201, Transcript of PRAME family member 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF27, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF27-201ENST00000436041 DDB1Q16531 1140 aa15.33■□□□□ 0.05
PRAMEF27-201ENST00000436041 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.05
PRAMEF27-201ENST00000436041 DBF4Q9UBU7 674 aaPredicted RBP15.33■□□□□ 0.05
PRAMEF27-201ENST00000436041 SNRPA1P09661 255 aaKnown RBP15.33■□□□□ 0.04
PRAMEF27-201ENST00000436041 FLIIQ13045 1269 aa15.33■□□□□ 0.04
PRAMEF27-201ENST00000436041 ZNF496Q96IT1 587 aaPredicted RBP15.33■□□□□ 0.04
PRAMEF27-201ENST00000436041 ZBTB40Q9NUA8 1239 aa15.33■□□□□ 0.04
PRAMEF27-201ENST00000436041 USP21Q9UK80 565 aa15.33■□□□□ 0.04
PRAMEF27-201ENST00000436041 BCL9LQ86UU0 1499 aa15.32■□□□□ 0.04
PRAMEF27-201ENST00000436041 MEX3CQ5U5Q3 659 aaKnown RBP15.32■□□□□ 0.04
PRAMEF27-201ENST00000436041 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
PRAMEF27-201ENST00000436041 C8orf34Q49A92 452 aa15.31■□□□□ 0.04
PRAMEF27-201ENST00000436041 L1TD1Q5T7N2 865 aaKnown RBP15.31■□□□□ 0.04
PRAMEF27-201ENST00000436041 FKBP5Q13451 457 aaPredicted RBP15.31■□□□□ 0.04
PRAMEF27-201ENST00000436041 CHPF2Q9P2E5 772 aa15.31■□□□□ 0.04
PRAMEF27-201ENST00000436041 PCDHB15Q9Y5E8 787 aa15.31■□□□□ 0.04
PRAMEF27-201ENST00000436041 PRAMEF22A3QJZ6 481 aa15.3■□□□□ 0.04
PRAMEF27-201ENST00000436041 SHANK3Q9BYB0 1731 aa15.3■□□□□ 0.04
PRAMEF27-201ENST00000436041 LRP6O75581 1613 aa15.3■□□□□ 0.04
PRAMEF27-201ENST00000436041 CCT4P50991 539 aaKnown RBP15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 PHAXQ9H814 394 aaKnown RBP15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 HYPKQ9NX55 129 aa15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 RGS12O14924 1447 aa15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 TNS2Q63HR2 1409 aa15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 IGHDP01880 384 aa15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 PIGBQ92521 554 aa15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 DDX21Q9NR30 783 aaKnown RBP eCLIP15.29■□□□□ 0.04
PRAMEF27-201ENST00000436041 USP16Q9Y5T5 823 aa15.28■□□□□ 0.04
PRAMEF27-201ENST00000436041 CACNA1FO60840 1977 aa15.28■□□□□ 0.04
PRAMEF27-201ENST00000436041 F6X3S4 739 aa15.27■□□□□ 0.04
PRAMEF27-201ENST00000436041 FAM98CQ17RN3 349 aaKnown RBP15.27■□□□□ 0.04
PRAMEF27-201ENST00000436041 SLC4A10Q6U841 1118 aa15.27■□□□□ 0.04
PRAMEF27-201ENST00000436041 MARCH10Q8NA82 808 aaPredicted RBP15.27■□□□□ 0.03
PRAMEF27-201ENST00000436041 PDIA6Q15084 440 aa15.26■□□□□ 0.03
PRAMEF27-201ENST00000436041 PRIM1P49642 420 aaKnown RBP15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 HDAC1Q13547 482 aaPredicted RBP15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 ATG3Q9NT62 314 aa15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 AFF2P51816 1311 aa15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 ANXA1P04083 346 aa15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 GJD4Q96KN9 370 aaPredicted RBP15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 TEX13AQ9BXU3 409 aaPredicted RBP15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 ASAP1Q9ULH1 1129 aa15.25■□□□□ 0.03
PRAMEF27-201ENST00000436041 WNK3Q9BYP7 1800 aa15.24■□□□□ 0.03
PRAMEF27-201ENST00000436041 PI4KAP2A4QPH2 592 aa15.24■□□□□ 0.03
PRAMEF27-201ENST00000436041 DDX58O95786 925 aaKnown RBP15.24■□□□□ 0.03
PRAMEF27-201ENST00000436041 PROSER3Q2NL68 480 aa15.24■□□□□ 0.03
PRAMEF27-201ENST00000436041 PI4KAP1Q8N8J0 262 aa15.24■□□□□ 0.03
PRAMEF27-201ENST00000436041 TRPC5Q9UL62 973 aaPredicted RBP15.24■□□□□ 0.03
PRAMEF27-201ENST00000436041 BCL9O00512 1426 aa15.23■□□□□ 0.03
PRAMEF27-201ENST00000436041 ERBB4Q15303 1308 aa15.23■□□□□ 0.03
PRAMEF27-201ENST00000436041 KSR2Q6VAB6 950 aa15.23■□□□□ 0.03
PRAMEF27-201ENST00000436041 SYTL4Q96C24 671 aaPredicted RBP15.23■□□□□ 0.03
PRAMEF27-201ENST00000436041 DNAAF4Q8WXU2 420 aa15.23■□□□□ 0.03
PRAMEF27-201ENST00000436041 FRAT2O75474 233 aaPredicted RBP15.22■□□□□ 0.03
PRAMEF27-201ENST00000436041 MYL6BP14649 208 aa15.22■□□□□ 0.03
PRAMEF27-201ENST00000436041 BECN1Q14457 450 aa15.22■□□□□ 0.03
PRAMEF27-201ENST00000436041 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
PRAMEF27-201ENST00000436041 SRCIN1Q9C0H9 1055 aa15.21■□□□□ 0.03
PRAMEF27-201ENST00000436041 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.21■□□□□ 0.03
PRAMEF27-201ENST00000436041 TOGARAM1Q9Y4F4 1720 aa15.21■□□□□ 0.03
PRAMEF27-201ENST00000436041 KCPQ6ZWJ8 1503 aa15.21■□□□□ 0.03
PRAMEF27-201ENST00000436041 GNAI3P08754 354 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 RPAP2Q8IXW5 612 aaPredicted RBP15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 ISY1Q9ULR0 285 aaKnown RBP15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 PXDNLA1KZ92 1463 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 A0A0G2JS52 829 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 AIMP1Q12904 312 aaKnown RBP15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 BEND3Q5T5X7 828 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 LRP10Q7Z4F1 713 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 MEIS3Q99687 375 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 QTRT2Q9H974 415 aaKnown RBP15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 MAP3K2Q9Y2U5 619 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 PAPPAQ13219 1627 aa15.2■□□□□ 0.02
PRAMEF27-201ENST00000436041 XAGE3Q8WTP9 111 aa15.19■□□□□ 0.02
PRAMEF27-201ENST00000436041 ACSBG1Q96GR2 724 aa15.19■□□□□ 0.02
PRAMEF27-201ENST00000436041 C1orf115Q9H7X2 142 aa15.19■□□□□ 0.02
PRAMEF27-201ENST00000436041 ADCY9O60503 1353 aa15.19■□□□□ 0.02
PRAMEF27-201ENST00000436041 UBR2Q8IWV8 1755 aa15.19■□□□□ 0.02
PRAMEF27-201ENST00000436041 STARD3NLO95772 234 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 ANKRD13DQ6ZTN6 518 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 RIC3Q7Z5B4 369 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 C5P01031 1676 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 ATRNO75882 1429 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 A1BGP04217 495 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 GNAI2P04899 355 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 USP44Q9H0E7 712 aa15.18■□□□□ 0.02
PRAMEF27-201ENST00000436041 ITGB4P16144 1822 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 ALDH1L1O75891 902 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 CLCN1P35523 988 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 NBPF14Q5TI25 921 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 NBPF10Q6P3W6 841 aaKnown RBP15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 SIRT2Q8IXJ6 389 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 SMC5Q8IY18 1101 aa15.17■□□□□ 0.02
PRAMEF27-201ENST00000436041 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms