RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 CXXC1Q9P0U4 656 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-212ENST00000434424 NACADO15069 1562 aa11.33□□□□□ -0.6
PTPRK-212ENST00000434424 RAB15P59190 212 aa11.33□□□□□ -0.6
PTPRK-212ENST00000434424 NPAS4Q8IUM7 802 aa11.33□□□□□ -0.6
PTPRK-212ENST00000434424 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
PTPRK-212ENST00000434424 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-212ENST00000434424 POLMQ9NP87 494 aaPredicted RBP11.33□□□□□ -0.6
PTPRK-212ENST00000434424 KIAA1024Q9UPX6 916 aa11.33□□□□□ -0.6
PTPRK-212ENST00000434424 ERVH48-1M5A8F1 160 aa11.32□□□□□ -0.6
PTPRK-212ENST00000434424 ADH1AP07327 375 aa11.32□□□□□ -0.6
PTPRK-212ENST00000434424 SLURP2P0DP57 97 aa11.32□□□□□ -0.6
PTPRK-212ENST00000434424 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
PTPRK-212ENST00000434424 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
PTPRK-212ENST00000434424 ESPNB1AK53 854 aa11.31□□□□□ -0.6
PTPRK-212ENST00000434424 H3BRB1 525 aa11.31□□□□□ -0.6
PTPRK-212ENST00000434424 OCLNQ16625 522 aa11.31□□□□□ -0.6
PTPRK-212ENST00000434424 GLYCTKQ8IVS8 523 aa11.31□□□□□ -0.6
PTPRK-212ENST00000434424 TUT1Q9H6E5 874 aaKnown RBP11.31□□□□□ -0.6
PTPRK-212ENST00000434424 CDC14CA4D256 554 aa11.3□□□□□ -0.6
PTPRK-212ENST00000434424 ICMTO60725 284 aa11.3□□□□□ -0.6
PTPRK-212ENST00000434424 RASSF7Q02833 373 aa11.3□□□□□ -0.6
PTPRK-212ENST00000434424 ZNF211Q13398 564 aaPredicted RBP11.3□□□□□ -0.6
PTPRK-212ENST00000434424 RNF20Q5VTR2 975 aa11.3□□□□□ -0.6
PTPRK-212ENST00000434424 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
PTPRK-212ENST00000434424 TCF3P15923 654 aa11.29□□□□□ -0.6
PTPRK-212ENST00000434424 PTGIRP43119 386 aa11.29□□□□□ -0.6
PTPRK-212ENST00000434424 PSME1Q06323 249 aa11.29□□□□□ -0.6
PTPRK-212ENST00000434424 TPCN2Q8NHX9 752 aa11.29□□□□□ -0.6
PTPRK-212ENST00000434424 SFI1A8K8P3 1242 aa11.28□□□□□ -0.6
PTPRK-212ENST00000434424 GIGYF1O75420 1035 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-212ENST00000434424 ARHGEF15O94989 841 aa11.28□□□□□ -0.6
PTPRK-212ENST00000434424 TMEM151AQ8N4L1 468 aa11.28□□□□□ -0.6
PTPRK-212ENST00000434424 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
PTPRK-212ENST00000434424 CUEDC1Q9NWM3 386 aaPredicted RBP11.28□□□□□ -0.6
PTPRK-212ENST00000434424 MAPK1P28482 360 aa11.27□□□□□ -0.61
PTPRK-212ENST00000434424 SVOPQ8N4V2 548 aa11.27□□□□□ -0.61
PTPRK-212ENST00000434424 HINFPQ9BQA5 517 aa11.27□□□□□ -0.61
PTPRK-212ENST00000434424 GDF11O95390 407 aa11.26□□□□□ -0.61
PTPRK-212ENST00000434424 USP4Q13107 963 aa11.26□□□□□ -0.61
PTPRK-212ENST00000434424 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
PTPRK-212ENST00000434424 C21orf2O43822 256 aa11.25□□□□□ -0.61
PTPRK-212ENST00000434424 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
PTPRK-212ENST00000434424 VAMP1P23763 118 aa11.24□□□□□ -0.61
PTPRK-212ENST00000434424 ZSCAN29Q8IWY8 852 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-212ENST00000434424 GTF3C2Q8WUA4 911 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-212ENST00000434424 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
PTPRK-212ENST00000434424 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
PTPRK-212ENST00000434424 DCTN4Q9UJW0 460 aa11.24□□□□□ -0.61
PTPRK-212ENST00000434424 FKBP4Q02790 459 aaKnown RBP eCLIP11.23□□□□□ -0.61
PTPRK-212ENST00000434424 GAS6Q14393 721 aa11.23□□□□□ -0.61
PTPRK-212ENST00000434424 ASB16Q96NS5 453 aa11.23□□□□□ -0.61
PTPRK-212ENST00000434424 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
PTPRK-212ENST00000434424 LYSMD3Q7Z3D4 306 aa11.22□□□□□ -0.61
PTPRK-212ENST00000434424 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
PTPRK-212ENST00000434424 SEPT3Q9UH03 358 aa11.22□□□□□ -0.61
PTPRK-212ENST00000434424 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-212ENST00000434424 LGR5O75473 907 aa11.21□□□□□ -0.61
PTPRK-212ENST00000434424 ADAMTS2O95450 1211 aa11.21□□□□□ -0.61
PTPRK-212ENST00000434424 CCDC125Q86Z20 511 aa11.21□□□□□ -0.61
PTPRK-212ENST00000434424 MKNK1Q9BUB5 465 aa11.21□□□□□ -0.61
PTPRK-212ENST00000434424 PCDHB11Q9Y5F2 797 aa11.21□□□□□ -0.61
PTPRK-212ENST00000434424 DNMT3AQ9Y6K1 912 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-212ENST00000434424 PTCD1O75127 700 aaKnown RBP11.2□□□□□ -0.62
PTPRK-212ENST00000434424 RNF144AP50876 292 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-212ENST00000434424 LYPD4Q6UWN0 246 aa11.2□□□□□ -0.62
PTPRK-212ENST00000434424 SEPT12Q8IYM1 358 aa11.2□□□□□ -0.62
PTPRK-212ENST00000434424 M0R2N6 131 aa11.19□□□□□ -0.62
PTPRK-212ENST00000434424 RHOQP17081 205 aa11.19□□□□□ -0.62
PTPRK-212ENST00000434424 WEE1P30291 646 aa11.19□□□□□ -0.62
PTPRK-212ENST00000434424 COL19A1Q14993 1142 aa11.19□□□□□ -0.62
PTPRK-212ENST00000434424 PRICKLE2Q7Z3G6 844 aa11.19□□□□□ -0.62
PTPRK-212ENST00000434424 IRS1P35568 1242 aa11.18□□□□□ -0.62
PTPRK-212ENST00000434424 ECM1Q16610 540 aa11.18□□□□□ -0.62
PTPRK-212ENST00000434424 TAGLNQ01995 201 aaKnown RBP11.17□□□□□ -0.62
PTPRK-212ENST00000434424 SRSF11Q05519 484 aaKnown RBP11.17□□□□□ -0.62
PTPRK-212ENST00000434424 FKBP5Q13451 457 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-212ENST00000434424 TSEN2Q8NCE0 465 aaKnown RBP11.17□□□□□ -0.62
PTPRK-212ENST00000434424 ARHGAP4P98171 946 aa11.16□□□□□ -0.62
PTPRK-212ENST00000434424 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-212ENST00000434424 C8orf37Q96NL8 207 aa11.16□□□□□ -0.62
PTPRK-212ENST00000434424 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
PTPRK-212ENST00000434424 MTMR3Q13615 1198 aa11.15□□□□□ -0.62
PTPRK-212ENST00000434424 RGL4Q8IZJ4 473 aa11.15□□□□□ -0.62
PTPRK-212ENST00000434424 COL26A1Q96A83 441 aa11.15□□□□□ -0.62
PTPRK-212ENST00000434424 ZNF837Q96EG3 531 aaPredicted RBP11.15□□□□□ -0.62
PTPRK-212ENST00000434424 CELA2BP08218 269 aaPredicted RBP11.14□□□□□ -0.63
PTPRK-212ENST00000434424 CECR2Q9BXF3 1484 aa11.13□□□□□ -0.63
PTPRK-212ENST00000434424 RECKO95980 971 aa11.13□□□□□ -0.63
PTPRK-212ENST00000434424 DBN1Q16643 649 aa11.13□□□□□ -0.63
PTPRK-212ENST00000434424 CAPN12Q6ZSI9 719 aa11.13□□□□□ -0.63
PTPRK-212ENST00000434424 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPRK-212ENST00000434424 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
PTPRK-212ENST00000434424 A0A1W2PRU2 124 aa11.12□□□□□ -0.63
PTPRK-212ENST00000434424 MEN1O00255 615 aa11.12□□□□□ -0.63
PTPRK-212ENST00000434424 HMGB1P09429 215 aaKnown RBP11.12□□□□□ -0.63
PTPRK-212ENST00000434424 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
PTPRK-212ENST00000434424 TRIM22Q8IYM9 498 aa11.12□□□□□ -0.63
PTPRK-212ENST00000434424 DRC1Q96MC2 740 aa11.12□□□□□ -0.63
PTPRK-212ENST00000434424 GPR25O00155 361 aa11.11□□□□□ -0.63
PTPRK-212ENST00000434424 FOXO3O43524 673 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms