RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 ERC1Q8IUD2 1116 aa12.12□□□□□ -0.47
PKNOX1-203ENST00000432907 C1orf141Q5JVX7 400 aa12.12□□□□□ -0.47
PKNOX1-203ENST00000432907 AFAP1Q8N556 730 aa12.12□□□□□ -0.47
PKNOX1-203ENST00000432907 SSR1P43307 286 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 EIF5P55010 431 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 DAPK1P53355 1430 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 ABCA5Q8WWZ7 1642 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 TUBB4AP04350 444 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 EXOC6BQ9Y2D4 811 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 SARNPP82979 210 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 KRT32Q14532 448 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 TAF4BQ92750 862 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 BCL2L12Q9HB09 334 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 ATP2C2O75185 946 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 CPLX3Q8WVH0 158 aa12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 BCCIPQ9P287 314 aaKnown RBP eCLIP12.11□□□□□ -0.47
PKNOX1-203ENST00000432907 PHACTR2O75167 634 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 PCDHB15Q9Y5E8 787 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 GJB2P29033 226 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 C17orf53Q8N3J3 647 aaPredicted RBP12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 OTUD6BQ8N6M0 293 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 CCDC113Q9H0I3 377 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 CNPY2Q9Y2B0 182 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 SART3Q15020 963 aaKnown RBP12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 BIN1O00499 593 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 TRIM27P14373 513 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 FSIP1Q8NA03 581 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
PKNOX1-203ENST00000432907 ANKRD62A6NC57 917 aa12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 ZSCAN22P10073 491 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 IFFO1Q0D2I5 559 aa12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 RNF216Q9NWF9 866 aaPredicted RBP12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 SPA17Q15506 151 aa12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 BANK1Q8NDB2 785 aa12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 DDX54Q8TDD1 881 aaKnown RBP12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 ERBINQ96RT1 1412 aa12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 RAPGEF6Q8TEU7 1601 aa12.09□□□□□ -0.47
PKNOX1-203ENST00000432907 ZNF445P59923 1031 aa12.08□□□□□ -0.47
PKNOX1-203ENST00000432907 GOLGA1Q92805 767 aa12.08□□□□□ -0.47
PKNOX1-203ENST00000432907 SIL1Q9H173 461 aa12.08□□□□□ -0.47
PKNOX1-203ENST00000432907 A0A1B0GUA9 196 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 CTAGE15A4D2H0 777 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 SLC3A2P08195 630 aaKnown RBP12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 CTAGE8P0CG41 777 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 KLHL10Q6JEL2 608 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 SYT10Q6XYQ8 523 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 CTAGE6Q86UF2 777 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 CTAGE4Q8IX94 777 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 PPM1EQ8WY54 764 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 ZBTB9Q96C00 473 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 TANGO6Q9C0B7 1094 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 CABP2Q9NPB3 220 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 RAB11FIP3O75154 756 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 SPECC1Q5M775 1068 aa12.08□□□□□ -0.48
PKNOX1-203ENST00000432907 SMC1AQ14683 1233 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 NAA25Q14CX7 972 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 ATRIPQ8WXE1 791 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 DNAJC25Q9H1X3 360 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 CPSF2Q9P2I0 782 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 ARHGEF11O15085 1522 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 TRIM22Q8IYM9 498 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 NUP160Q12769 1436 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 SLC12A5Q9H2X9 1139 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 HDAC1Q13547 482 aaPredicted RBP12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 MAATS1Q7Z4T9 603 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 KIAA1107Q9UPP5 1409 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 CCDC141Q6ZP82 1450 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 TMPOP42166 694 aaKnown RBP12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 TYRO3Q06418 890 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 CERS3Q8IU89 383 aa12.07□□□□□ -0.48
PKNOX1-203ENST00000432907 KIAA0556O60303 1618 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 MAP2K2P36507 400 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 ELF2Q15723 593 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 NUP88Q99567 741 aaPredicted RBP12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 DACT1Q9NYF0 836 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 SRGAP3O43295 1099 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 HSF2BPO75031 334 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 NUCB1Q02818 461 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 HLTFQ14527 1009 aaKnown RBP eCLIP12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 CCAR1Q8IX12 1150 aaKnown RBP12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 SCLT1Q96NL6 688 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 ALDH1L2Q3SY69 923 aa12.06□□□□□ -0.48
PKNOX1-203ENST00000432907 PTPN23Q9H3S7 1636 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 CD109Q6YHK3 1445 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 MSL1Q68DK7 614 aa12.05□□□□□ -0.48
PKNOX1-203ENST00000432907 RSRC1Q96IZ7 334 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms